BAC Information

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BAC

Clone NameB6Ng01-009D15
Chromosome4 (Build37)
Map Location 78,387,621 - 78,388,547
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009D15.bB6Ng01-009D15.g
ACCDH845225DH845226
length1,1901,259
definitionDH845225|Mus musculus domesticus DNA, BAC clone: B6Ng01-009D15, 5' end.DH845226|Mus musculus domesticus DNA, BAC clone: B6Ng01-009D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaaaaatccccagcattccagtcatcacataatcacaaaat
ctatctgctactggcaaatcacacccctgctagagaaggaggcaaatcat
actcagctattatgggcaatctgaagcagccccacatggctcacctagga
ttaaaacaaaaatgcatacttataatatttctgattttttttatttttca
attttcttattagagattatcttcatttacatttcaagtgctatcccgaa
agtcccctataccctccccccaccctgctcccctattcgcccactctcac
ttcttggccctggcattcccctgtgctggggcctataaagtttgcaagaa
caagggacctctcttcccaatgatggtcgactaggccatcttctgatagt
gaaatgccaaaattgtttctataatcttttattaaaattatggacatatt
tcttagattcttttgggatctctcttctgttgctttttttctggttccat
atccctctgtcaatgtcacacaatcatggttaatgtttatacaaaacaac
ttgaaattgggtggactaatacattttgtgatttttcttcttttcagata
gtttcaccattttattcattactctccccaaaataattttctctatgccg
tgtgcaaagatttactactattcttttaatagtaataacagtgcaacata
aatttcaatttgagaaaattacagtactctacacgttaacacttcgtaat
ttccatcttggtgtttcctgccatttgccatgtgccctgtgccatgagtc
atgtgttatatgtcatgtgtaatgtatcaaaccataagcatcttaccaaa
cccttgaagtttctcttggactcataatatagctataatttacaaaaact
aatttttttaatatctgtgttttaaatcccaggaaatagtaattatcaac
caagataatactcataacactgcttcaaagatccaatttaaacacatatc
tttcttgtgtcactattagcatcatatacgctttttctacatttcatgta
gaccgattttaatttggtagactttcctctagattatactatttatcagt
agggtgatttcattatcttatgatactccctccaaaccttattttctttg
tttcagtcccaacaccctaagaaatttgagaatttcatac
gaattctaggacacaatgagaagaccaaaactaaggataatagagaacaa
agattcccaacttaaaaggctagtaaatatcttcagcaaaattataggag
aaaacttcactaacctaaagaaagagatgcccataaccatacaagaagcc
tacagaactctaaattgactggaccagaaagaaattatttctgtcatata
ataatcaaaacaccaaataaacagaacaaagaaatattaaaatcagtaag
gtaaaaaggtgaagtaacatattaaggcagatctataagaattacactag
tcttttcaccagggtctataaaatccaaaagctcctgggcagatgtcata
cagaccttaagagaacacaaatagcagcccaggctactatacccaacaga
actcccaattgccatagatggagaaaccaagataacaaaacaaaatttac
acagtatcttcccacaaatccagttatgcaaaggataatagaggaataac
aacaacacaaggaaggaaactacaggctagaaaaagcaggaaaaatatct
tcttttaacaaaccaaaagtagatagccacataaacataattccaccact
aacaataaaaataaaacaggaagcaacaatcacttttccttaatatttct
taatatcagtggactcaattccccaattaaaagacatatactaacagact
ggacaattaaacaggatccaacaatttgctgcatacaggaaacacaactc
agtgacaaagacagacactaactcagagtaaaaaacctgaaaggtatttt
cctagcatatggtcacaagaaacaatctggagtagccattctaatttcaa
agaaaattgactttcaacaaaagttataaaaaaagatattgaaggaaaca
ttatacttgtcaaaggaaaataatctaccaagatgaactcctcaattctg
aacatctatgctccaaattcaaaggaacccacattataaaagaagcttta
ctaaagctcaaagcacacattacacctcccataataatattgggagactt
cacattcccactcttcgcaaagaaagatcatggaatcagagctaaccgag
acccagtgaactacggagtaatgaccaatggatttaatagatatttttga
acgtcctcctaaatgaaagaattcttccttcgcaccctatgtacctctcc
aaatgacatcaataatggttacaatatggcacttcacagaatactgcgcg
aggtggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78387621_78388547
seq2: B6Ng01-009D15.b_325_1238

seq1  GCTCCCCTATTCGCCCACTCTCACTTCTTGGCCCTGGCATTCCCCTGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCTATTCGCCCACTCTCACTTCTTGGCCCTGGCATTCCCCTGTGC  50

seq1  TGGGGCCTATAAAGTTTGCAAGAACAAGGGACCTCTCTTCCCAATGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTATAAAGTTTGCAAGAACAAGGGACCTCTCTTCCCAATGATGG  100

seq1  TCGACTAGGCCATCTTCTGATAGTGAAATGCCAAAATTGTTTCTATAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTAGGCCATCTTCTGATAGTGAAATGCCAAAATTGTTTCTATAATC  150

seq1  TTTTATTAAAATTATGGACATATTTCTTAGATTCTTTTGGGATCTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAAAATTATGGACATATTTCTTAGATTCTTTTGGGATCTCTCTT  200

seq1  CTGTTGCTTTTTTTCTGGTTCCATATCCCTCTGTCAATGTCACACAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTTTTTTTCTGGTTCCATATCCCTCTGTCAATGTCACACAATCA  250

seq1  TGGTTAATGTTTATACAAAACAACTTGAAATTGGGTGGACTAATACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATGTTTATACAAAACAACTTGAAATTGGGTGGACTAATACATTT  300

seq1  TGTGATTTTTCTTCTTTTCAGATAGTTTCACCATTTTATTCATTACTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTTTCTTCTTTTCAGATAGTTTCACCATTTTATTCATTACTCTC  350

seq1  CCCAAAATAATTTTCTCTATGCCGTGTGCAAAGATTTACTACTATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATAATTTTCTCTATGCCGTGTGCAAAGATTTACTACTATTCTTT  400

seq1  TAATAGTAATAACAGTGCAACATAAATTTCAATTTGAGAAAATTACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTAATAACAGTGCAACATAAATTTCAATTTGAGAAAATTACAGTA  450

seq1  CTCTACACGTTAACACTTCGTAATTTCCATCTTGGTGTTTCCTGCCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACACGTTAACACTTCGTAATTTCCATCTTGGTGTTTCCTGCCATTT  500

seq1  GCCATGTGCCCTGTGCCATGAGTCATGTGTTATATGTCATGTGTAATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGCCCTGTGCCATGAGTCATGTGTTATATGTCATGTGTAATGTA  550

seq1  TCAAACCATAAGCATCTTACCAAACCCTTGAAGTTTCTCTTGGACTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCATAAGCATCTTACCAAACCCTTGAAGTTTCTCTTGGACTCATA  600

seq1  ATATAGCTATAATTTACAAAAACTAATTTTTTTAATATCTGTGTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCTATAATTTACAAAAACTAATTTTTTTAATATCTGTGTTTTAAA  650

seq1  TCCCAGGAAAATAGTAATTATCAACCAAGATAATACTCATAAACACTGCT  700
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  TCCCAGG-AAATAGTAATTATCAACCAAGATAATACTCAT-AACACTGCT  698

seq1  TCAAAGAATCCAATTTAAACACATATCTTTCTTGTGTCAACTATTAAGCA  750
      |||||| ||||||||||||||||||||||||||||||| |||||| ||||
seq2  TCAAAG-ATCCAATTTAAACACATATCTTTCTTGTGTC-ACTATT-AGCA  745

seq1  TCATATACGTTTTTTCTACATTTCATGTAGACAGATTTTATTTTGGTTAG  800
      ||||||||| |||||||||||||||||||||| ||||||| ||||| |||
seq2  TCATATACGCTTTTTCTACATTTCATGTAGACCGATTTTAATTTGG-TAG  794

seq1  ACTTT-CTCTAGAATTATAACTATTTTATCAGGTAGGGTGATTTCATATA  849
      ||||| |||||| ||||| |||| ||||||| |||||||||||||||   
seq2  ACTTTCCTCTAG-ATTAT-ACTA-TTTATCA-GTAGGGTGATTTCATTAT  840

seq1  CTTATGATACT-GCTCAAAACATTTTATTTTCTTTTGTTTCAGTCACAAA  898
      |||||||||||  ||| ||||   |||||||| |||||||||||| ||| 
seq2  CTTATGATACTCCCTCCAAAC--CTTATTTTC-TTTGTTTCAGTCCCAAC  887

seq1  CACATAAAAAATATTTGAGAATTTCATAC  927
        | ||| ||  |||||||||||||||||
seq2  ACCCTAAGAA--ATTTGAGAATTTCATAC  914