BAC Information

Click to search

BAC

Clone NameB6Ng01-010B12
Chromosome4 (Build37)
Map Location 136,341,914 - 136,497,244
singlet/doubletdoublet
Overlap geneEphb2, C1qb, C1qc, C1qa, Epha8
Upstream geneMyom3, Fusip1, Pnrc2, Cnr2, Fuca1, Hmgcl, Gale, Lypla2, 1110049F12Rik, LOC669445, Tceb3, Rpl11, Id3, E2f2, Ddefl1, Tcea3, Zfp46, Hnrpr, Htr1d, LOC100042540, Luzp1, Aof2, LOC667080, LOC433770, 4930549C01Rik, BC029684
Downstream geneZbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010B12.bB6Ng01-010B12.g
ACCDH845863DH845864
length8811,101
definitionDH845863|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B12, 5' end.DH845864|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,496,366 - 136,497,244)(136,341,914 - 136,343,004)
sequence
gaattcatcacatggataggcaagaaaaggcaccctgagaagaaagccca
gcatgtgtaaaggccctggggcctgtagcgtgagaacagccggagcccag
tctggcctgaggatgggaggctgaggtagagggtcagcagggattcctga
gcctatctgacttgatcttacccttcagatatccaccctccatccttggg
gagggggcttctgccactgctctccaggacccttttgccctcctgagtat
aatttgatcgtgtttgccggcatctccttccctaacatggtgtaaggcgg
actgggcagttcaattaatgaatgtcccccggctctgaaaagggcctggt
cctgggtcctgctcctaagtgatctagctatcaactgactgaggaggtag
gtgggcaggaggtcctgttggaagctaccaaggtcactcagatgaggtgc
tgtcagaggtgacagggtggtgggtcctagtgtcaggttaactggggaac
ttgtgcatcatgaaacatcagaccccagccatagctttgctacctttgag
tttgtggtgaggctggggagctggctttaatgggagagggtccctgtttg
tccgggcttggcaccaggtcgtgcatgggtcttttcttactcgcccaagt
cacacagccatggctttagccacgctccctgtgaatggcagctacttggt
ccctgtcagaatctgaggcaaaggagagttggggatgtgcggctttgggg
gtgaccactttgggttggaactcatatcaaggtcctagctcaactccatg
caaccctggtggaaattcaaatgccttgtctacactctgactccacccca
tctgattgtgaggatagcatcaggatataca
gaattcagggatttgtgtctactaggcaaacgctctaccgaccgagctgc
atccctgagctgcatccctagtaaccagatacaaaggtcttttttaggat
gtttttgacgcacagttggttggattcacagatgtagagttgatagataa
cgggaagttgactatgtaattcaaagaccttactttgtgccaaccactga
gctgaactgtcactggcgctcaaaaaacgtcctgagatggtatcctgtgc
ctgcccacccagcaacacccacctgtctatcattctgttcatccagtaac
ctactacccatttgcctgcccacccgctttgcccgcccacccgctcctgt
agccttatccatggggggcatccactcccacagccccagcctccttgcct
cctacaaaacaaagcttcagagaggttatgaaactcacctaacatcacac
agctagaaagccacagagcccggaggcgtaccaataactttcccctccct
gctcgttgatcccctccccgattcacatcatatctaactgtcctgcccca
cgcaggcttaatcgcgtaagtcgcctcaaatcctctggatgcgaggggag
tgtaaattaaagatcaatatgacacagaccactgcgaagcccagccaggc
ctgtgaggctgaagtcaattagccagcctgctgcagggcctgccggggct
gcgtctatttgcctaattggccctgttcccccccccccccccagtgaaag
ggcaattaactcaaacttcagaacccggagcaccccttggcttctgggca
aggtgtcgggcatttagccacgccggggtttgctattcatccatttcacc
agtgacccccacacacggatccatttgtctctccggacatctgaatcctg
gcagtcaaaaagtactcaaactttaactcatatcgcacacacacatccat
ttgcatgcctgcccaccccacccactccattcacttcttcagcaaggctc
ccacccattccccacacttcacttattggatccactcaatctaggcagcc
cgtatatggacataattctgctttactgggacgttcaacgccccgtccca
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_136496366_136497244
seq2: B6Ng01-010B12.b_44_924 (reverse)

seq1  TGTATATCCTGATGCTATCCTCACCATCAGATGGGGTGGAGTCAGAGTGT  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTATATCCTGATGCTATCCTCACAATCAGATGGGGTGGAGTCAGAGTGT  50

seq1  AGACAAGGCATTTG-ACTTCCA-CAGGGTTGCATGGAGTTGAGCTAGGAC  98
      |||||||||||||| | ||||| |||||||||||||||||||||||||||
seq2  AGACAAGGCATTTGAATTTCCACCAGGGTTGCATGGAGTTGAGCTAGGAC  100

seq1  CTTGATATGAGTTCCAAACCCAAAGTGGTCA-CCCCAAAGCCGCACATCC  147
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  CTTGATATGAGTTCC-AACCCAAAGTGGTCACCCCCAAAGCCGCACATCC  149

seq1  CCAACTCTCCTTTGCCTCAGATTCTGACAGGGACCAAGTAGCTGCCATTC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTCCTTTGCCTCAGATTCTGACAGGGACCAAGTAGCTGCCATTC  199

seq1  ACAGGGAGCGTGGCTAAAGCCATGGCTGTGTGACTTGGGCGAGTAAGAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGCGTGGCTAAAGCCATGGCTGTGTGACTTGGGCGAGTAAGAAA  249

seq1  AGACCCATGCACGACCTGGTGCCAAGCCCGGACAAACAGGGACCCTCTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCATGCACGACCTGGTGCCAAGCCCGGACAAACAGGGACCCTCTCC  299

seq1  CATTAAAGCCAGCTCCCCAGCCTCACCACAAACTCAAAGGTAGCAAAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAGCCAGCTCCCCAGCCTCACCACAAACTCAAAGGTAGCAAAGCT  349

seq1  ATGGCTGGGGTCTGATGTTTCATGATGCACAAGTTCCCCAGTTAACCTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGGGGTCTGATGTTTCATGATGCACAAGTTCCCCAGTTAACCTGA  399

seq1  CACTAGGACCCACCACCCTGTCACCTCTGACAGCACCTCATCTGAGTGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGACCCACCACCCTGTCACCTCTGACAGCACCTCATCTGAGTGAC  449

seq1  CTTGGTAGCTTCCAACAGGACCTCCTGCCCACCTACCTCCTCAGTCAGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAGCTTCCAACAGGACCTCCTGCCCACCTACCTCCTCAGTCAGTT  499

seq1  GATAGCTAGATCACTTAGGAGCAGGACCCAGGACCAGGCCCTTTTCAGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTAGATCACTTAGGAGCAGGACCCAGGACCAGGCCCTTTTCAGAG  549

seq1  CCGGGGGACATTCATTAATTGAACTGCCCAGTCCGCCTTACACCATGTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGGACATTCATTAATTGAACTGCCCAGTCCGCCTTACACCATGTTA  599

seq1  GGGAAGGAGATGCCGGCAAACACGATCAAATTATACTCAGGAGGGCAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGATGCCGGCAAACACGATCAAATTATACTCAGGAGGGCAAAA  649

seq1  GGGTCCTGGAGAGCAGTGGCAGAAGCCCCCTCCCCAAGGATGGAGGGTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTGGAGAGCAGTGGCAGAAGCCCCCTCCCCAAGGATGGAGGGTGG  699

seq1  ATATCTGAAGGGTAAGATCAAGTCAGATAGGCTCAGGAATCCCTGCTGAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGAAGGGTAAGATCAAGTCAGATAGGCTCAGGAATCCCTGCTGAC  749

seq1  CCTCTACCTCAGCCTCCCATCCTCAGGCCAGACTGGGCTCCGGCTGTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTCAGCCTCCCATCCTCAGGCCAGACTGGGCTCCGGCTGTTCT  799

seq1  CACGCTACAGGCCCCAGGGCCTTTACACATGCTGGGCTTTCTTCTCAGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTACAGGCCCCAGGGCCTTTACACATGCTGGGCTTTCTTCTCAGGG  849

seq1  TGCCTTTTCTTGCCTATCCATGTGATGAATTC  879
      ||||||||||||||||||||||||||||||||
seq2  TGCCTTTTCTTGCCTATCCATGTGATGAATTC  881

seq1: chr4_136341914_136343004
seq2: B6Ng01-010B12.g_64_1164

seq1  GAATTCAGGGATTTGTGTCTACTAGGCAAACGCTCTACCGACCGAGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGATTTGTGTCTACTAGGCAAACGCTCTACCGACCGAGCTGC  50

seq1  ATCCCTGAGCTGCATCCCTAGTAACCAGATACAAAGGTCTTTTTTAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGAGCTGCATCCCTAGTAACCAGATACAAAGGTCTTTTTTAGGAT  100

seq1  GTTTTTGACGCACAGTTGGTTGGATTCACAGATGTAGAGTTGATAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACGCACAGTTGGTTGGATTCACAGATGTAGAGTTGATAGATAA  150

seq1  CGGGAAGTTGACTATGTAATTCAAAGACCTTACTTTGTGCCAACCACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGTTGACTATGTAATTCAAAGACCTTACTTTGTGCCAACCACTGA  200

seq1  GCTGAACTGTCACTGGCGCTCAAAAAACGTCCTGAGATGGTATCCTGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAACTGTCACTGGCGCTCAAAAAACGTCCTGAGATGGTATCCTGTGC  250

seq1  CTGCCCACCCAGCAACACCCACCTGTCTATCATTCTGTTCATCCAGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACCCAGCAACACCCACCTGTCTATCATTCTGTTCATCCAGTAAC  300

seq1  CTACTACCCATTTGCCTGCCCACCCGCTTTGCCCGCCCACCCGCTCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACCCATTTGCCTGCCCACCCGCTTTGCCCGCCCACCCGCTCCTGT  350

seq1  AGCCTTATCCATGGGGGGCATCCACTCCCACAGCCCCAGCCTCCTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATCCATGGGGGGCATCCACTCCCACAGCCCCAGCCTCCTTGCCT  400

seq1  CCTACAAAACAAAGCTTCAGAGAGGTTATGAAACTCACCTAACATCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAAACAAAGCTTCAGAGAGGTTATGAAACTCACCTAACATCACAC  450

seq1  AGCTAGAAAGCCACAGAGCCCGGAGGCGTACCAATAACTTTCCCCTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAAAGCCACAGAGCCCGGAGGCGTACCAATAACTTTCCCCTCCCT  500

seq1  GCTCGTTGATCCCCTCCCCGATTCACATCATATCTAACTGTCCTGCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTTGATCCCCTCCCCGATTCACATCATATCTAACTGTCCTGCCCCA  550

seq1  CGCAGGCTTAATCGCGTAAGTCGCCTCAAATCCTCTGGATGCGAGGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGCTTAATCGCGTAAGTCGCCTCAAATCCTCTGGATGCGAGGGGAG  600

seq1  TGTAAATTAAAGATCAATATGACACAGACCACTGCGAAGCCCAGCCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTAAAGATCAATATGACACAGACCACTGCGAAGCCCAGCCAGGC  650

seq1  CTGTGAGGCTGAAGTCAATTAGCCAGCCTGCTGCAGGGCCTGCCGGGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGCTGAAGTCAATTAGCCAGCCTGCTGCAGGGCCTGCCGGGGCT  700

seq1  GCGTCTATTTGCCTAATTGGCCCTGTT-CCCCCCCCCCCCCCAGTG-AAG  748
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  GCGTCTATTTGCCTAATTGGCCCTGTTCCCCCCCCCCCCCCCAGTGAAAG  750

seq1  GGCAATTAACTCAAACTTCAGAACCCGGAGCACCCCTTGGCTTCTGGGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTAACTCAAACTTCAGAACCCGGAGCACCCCTTGGCTTCTGGGCA  800

seq1  AGGTGTCGGGCATTTAGCCACGCCGGGATTTGCTATTCATCCA-TTCACC  847
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  AGGTGTCGGGCATTTAGCCACGCCGGGGTTTGCTATTCATCCATTTCACC  850

seq1  AGTGACCCCCACACACGGATCCATCTGTCTCTCCGACCATCTG-ATCCTT  896
      |||||||||||||||||||||||| ||||||||||  |||||| ||||| 
seq2  AGTGACCCCCACACACGGATCCATTTGTCTCTCCGGACATCTGAATCCTG  900

seq1  GCAGTCAACAAAGTACCCAAACTTCCACCCACCACCCGCACACACACATC  946
      |||||||| ||||||| |||||||  || ||     ||||||||||||||
seq2  GCAGTCAA-AAAGTACTCAAACTTTAACTCA--TATCGCACACACACATC  947

seq1  CATTTGCATGCCTGCCCA-CCCACCCAC-CCATTCACTCATCCAGCAAAG  994
      |||||||||||||||||| ||||||||| |||||||||  | |||||| |
seq2  CATTTGCATGCCTGCCCACCCCACCCACTCCATTCACTTCTTCAGCAAGG  997

seq1  CTCCCACCCATT-CCCACAC-TCACTCATT-GAACCACCCAATCCAGGCA  1041
      |||||||||||| ||||||| ||||| ||| || |||| ||||| |||||
seq2  CTCCCACCCATTCCCCACACTTCACTTATTGGATCCACTCAATCTAGGCA  1047

seq1  G-CCGTTTATGGACA-CATTCTGCTATCCT--GACGTTCAACGCCCCGCC  1087
      | |||| ||||||||  |||||||| | ||  |||||||||||||||| |
seq2  GCCCGTATATGGACATAATTCTGCTTTACTGGGACGTTCAACGCCCCGTC  1097

seq1  CCAA  1091
      ||||
seq2  CCAA  1101