BAC Information

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BAC

Clone NameB6Ng01-010I02
Chromosome4 (Build37)
Map Location 56,694,781 - 56,830,327
singlet/doubletdoublet
Overlap geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1
Upstream genenone
Downstream geneD730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010I02.bB6Ng01-010I02.g
ACCDH846157DH846158
length1,0371,034
definitionDH846157|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I02, 5' end.DH846158|Mus musculus domesticus DNA, BAC clone: B6Ng01-010I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,694,781 - 56,695,810)(56,829,290 - 56,830,327)
sequence
gaattcaatgctaccatgactgcatctcgtgttgctttgcttaaatgtgt
ggtcaggcccccctgtacactggggacattgccgcagatgttgccctgtc
tccaggactgttccatctctgcccactggggccttgttttatactcatgt
gcaggtttgcatggctggtcctcacatggcagaacccacagacaccccac
accccactcacccccacccccattaaaagctgagcctagcggtggcttac
agaactgtggatctgtccaccagtctgggtactaactcagaaaagcacaa
gttttccctttttctttttcctttttcttttttcttttctctttccttat
gatataggccaaagcctctgacacttggggcttcccttcctccagagcac
cctgctctttccctacacagatgcttggcctgccgccattttgctaacct
tcatgcctaactcataagcatgactttctctcgtcctcccttctccccgt
ctctcccccagcagctgctgagacttaaagcatgcctgccctgttgttgt
ttttctctgagactctaataaaattgtccatgagcttccaaaaacaaaat
tgagcctaagtgaatttgtgtgttattttcattaaggatcctttgaaacg
tctgggctatgaacatccgagttggccatccattcatggtgggggataag
aaaacagacactttgcacatgtcacgggtggcttagtgcatatgcaccac
tgatgactatcttgctcagagtgaactctccagtccaggtagccctggag
aagaacaagggtgagacctgcaaatgctgacatgacctgtgtttcagagt
gtcttagcagggctggagagatgactcagcggttaagagcactgactgct
ctttcagaggtcctgagttcaattcccagcaaacacatgttggctcacaa
ccatctgtaatgggatccgatgccctctttctggttgtttctgaagaaag
ctaccgtggtttccataaattaattaataataaataa
gaattcacccagtagaacatttacaagtgtagttaactgcctaatttaat
tacctgctgggaatggtaaagttagggttccttacaagttggcatgcttt
ctattactgacgacctgcctcacaattaaatgctaaaactatctttttat
tgtcacagaagaatagtgcaaacctgaagtcactaaagcccgacaaacct
gactcggaggtaagctctctgggtgtgtaacagtcttgtatcaatagtga
gacagttgtgaaaccctccttccgaggacagacctgtgattcccgggtgt
ttgtgttcctaggagcaagccaagatagcaaagctcgggctgaagctggg
attgctctcctctgatgctgactgtgaaatcgagaaatgggaagatgaag
agaacgagatcgttcggcatggacgcaatatgtccaggatggcctattct
ctgtatttatttactaggtatgcagtgccattttgatttgtttacgtgct
tgctcattcagctatttgagacagggtctcagacaacagtccaggctggc
ctagaactttcagcaaccttcctgtctcatgctcctgagtactggggcta
caggtgtgcaccataaataaataagtctttacgaagttaagaaaagattg
agacgtgagaggagcaaccccatggcgtagcagaggctagctcaaactct
gtgggctgggacagaaacactaaggtgtttcccatagttcttaattcttg
gtggcgcttaaactcctgaataaaactggtcaacacaagtggtattatga
ttattttctacatttagaactggaattttatatttgccccattgaagctg
aagctgagtctgccagggtccgatgcgcttttcactgcatacaaatgcat
ttggtgagacatatcatcagagttcatatttattcatgagcaaataagca
gcctgcaaaggacaaatcccaactaccaccttggctggcctcggctcttc
tttgtgtttatgaaatgaaccatatgacttgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56694781_56695810
seq2: B6Ng01-010I02.b_49_1085

seq1  GAATTCAATGCTACCATGACTGCATCTCGTGTTGCTTTGCTTAAATGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTACCATGACTGCATCTCGTGTTGCTTTGCTTAAATGTGT  50

seq1  GGTCAGGCCCCCCTGTACACTGGGGACATTGCCGCAGATGTTGCCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGCCCCCCTGTACACTGGGGACATTGCCGCAGATGTTGCCCTGTC  100

seq1  TCCAGGACTGTTCCATCTCTGCCCACTGGGGCCTTGTTTTATACTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACTGTTCCATCTCTGCCCACTGGGGCCTTGTTTTATACTCATGT  150

seq1  GCAGGTTTGCATGGCTGGTCCTCACATGGCAGAACCCACAGACACCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTTGCATGGCTGGTCCTCACATGGCAGAACCCACAGACACCCCAC  200

seq1  ACCCCACTCACCCCCACCCCCATTAAAAGCTGAGCCTAGCGGTGGCTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACTCACCCCCACCCCCATTAAAAGCTGAGCCTAGCGGTGGCTTAC  250

seq1  AGAACTGTGGATCTGTCCACCAGTCTGGGTACTAACTCAGAAAAGCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTGGATCTGTCCACCAGTCTGGGTACTAACTCAGAAAAGCACAA  300

seq1  GTTTTCCCTTTTTCTTTTTCCTTTTTCTTTTTTCTTTTCTCTTTCCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCTTTTTCTTTTTCCTTTTTCTTTTTTCTTTTCTCTTTCCTTAT  350

seq1  GATATAGGCCAAAGCCTCTGACACTTGGGGCTTCCCTTCCTCCAGAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGCCAAAGCCTCTGACACTTGGGGCTTCCCTTCCTCCAGAGCAC  400

seq1  CCTGCTCTTTCCCTACACAGATGCTTGGCCTGCCGCCATTTTGCTAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTTTCCCTACACAGATGCTTGGCCTGCCGCCATTTTGCTAACCT  450

seq1  TCATGCCTAACTCATAAGCATGACTTTCTCTCGTCCTCCCTTCTCCCCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTAACTCATAAGCATGACTTTCTCTCGTCCTCCCTTCTCCCCGT  500

seq1  CTCTCCCCCAGCAGCTGCTGAGACTTAAAGCATGCCTGCCCTGTTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCAGCAGCTGCTGAGACTTAAAGCATGCCTGCCCTGTTGTTGT  550

seq1  TTTTCTCTGAGACTCTAATAAAATTGTCCATGAGCTTCCAAAAACAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGAGACTCTAATAAAATTGTCCATGAGCTTCCAAAAACAAAAT  600

seq1  TGAGCCTAAGTGAATTTGTGTGTTATTTTCATTAAGGATCCTTTGAAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTAAGTGAATTTGTGTGTTATTTTCATTAAGGATCCTTTGAAACG  650

seq1  TCTGGGCTATGAACATCCGAGTTGGCCATCCATTCATGGTGGGGGATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTATGAACATCCGAGTTGGCCATCCATTCATGGTGGGGGATAAG  700

seq1  AAAACAGACACTTTGCACATGTCACGGGTGGCTTAGTGCATATGCACCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGACACTTTGCACATGTCACGGGTGGCTTAGTGCATATGCACCAC  750

seq1  TGATGACTATCTTGCTCAGAGTGAACTCTCCAGTCCAGGTAGCCCTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACTATCTTGCTCAGAGTGAACTCTCCAGTCCAGGTAGCCCTGGAG  800

seq1  AAGAACAAGGGTGAGACCTGCAAATGCTGACATGACCTGTGTTTCAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGAACAAGGGTGAGACCTGCAAATGCTGACATGACCTGTGTTTCAG-AG  849

seq1  TGTCTTAGCAGGGCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGCAGGGCTGGAGAGATGACTCAGCGGTTAAGAGCACTGACTGC  899

seq1  TCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAAACACATGTTGGCTCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAAACACATGTTGGCTCACA  949

seq1  ACCATCTGTAATGGGATCCGATGCCCTC-TTCTGG-TGTGTCTGAAGACA  998
      |||||||||||||||||||||||||||| |||||| ||| |||||||| |
seq2  ACCATCTGTAATGGGATCCGATGCCCTCTTTCTGGTTGTTTCTGAAGAAA  999

seq1  GCTACCGTGTATACACATAAATAAATAAATAA-------  1030
      |||||||||  | | ||||||| ||| |||||       
seq2  GCTACCGTGGTTTC-CATAAATTAATTAATAATAAATAA  1037

seq1: chr4_56829290_56830327
seq2: B6Ng01-010I02.g_65_1098 (reverse)

seq1  GCTCAAGTCATATGTGTCAATTTCAT-AACACAAAG-AGAGCCGAGGCCA  48
      |||||||||||||| ||  ||||||| ||||||||| |||||||||||||
seq2  GCTCAAGTCATATG-GTTCATTTCATAAACACAAAGAAGAGCCGAGGCCA  49

seq1  GCC-AGGTGGTTAGTGCGATTTGTCCTTTGCAGGCTGCTTTTATTTTGCT  97
      ||| |||||||   || |||||||||||||||||||||||    ||||| 
seq2  GCCAAGGTGGTAGTTGGGATTTGTCCTTTGCAGGCTGCTT---ATTTGC-  95

seq1  TCATGAATAAATATGAACTCTGATGATATGTCTCAACCAAATGCATTTTG  147
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  TCATGAATAAATATGAACTCTGATGATATGTCTC-ACCAAATGCA-TTTG  143

seq1  TATGCAGTGAAAAGCGCATCGGACCCTGGCAGACTCAGCTTCAGCTTCAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTGAAAAGCGCATCGGACCCTGGCAGACTCAGCTTCAGCTTCAA  193

seq1  TGGGGCAAATATAAAATTCCAGTTCTAAATGTAGAAAATAATCATAATAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAAATATAAAATTCCAGTTCTAAATGTAGAAAATAATCATAATAC  243

seq1  CACTTGTGTTGACCAGTTTTATTCAGGAGTTTAAGCGCCACCAAGAATTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTGTTGACCAGTTTTATTCAGGAGTTTAAGCGCCACCAAGAATTA  293

seq1  AGAACTATGGGAAACACCTTAGTGTTTCTGTCCCAGCCCACAGAGTTTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATGGGAAACACCTTAGTGTTTCTGTCCCAGCCCACAGAGTTTGA  343

seq1  GCTAGCCTCTGCTACGCCATGGGGTTGCTCCTCTCACGTCTCAATCTTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCTCTGCTACGCCATGGGGTTGCTCCTCTCACGTCTCAATCTTTT  393

seq1  CTTAACTTCGTAAAGACTTATTTATTTATGGTGCACACCTGTAGCCCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTTCGTAAAGACTTATTTATTTATGGTGCACACCTGTAGCCCCAG  443

seq1  TACTCAGGAGCATGAGACAGGAAGGTTGCTGAAAGTTCTAGGCCAGCCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGGAGCATGAGACAGGAAGGTTGCTGAAAGTTCTAGGCCAGCCTG  493

seq1  GACTGTTGTCTGAGACCCTGTCTCAAATAGCTGAATGAGCAAGCACGTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTGTCTGAGACCCTGTCTCAAATAGCTGAATGAGCAAGCACGTAA  543

seq1  ACAAATCAAAATGGCACTGCATACCTAGTAAATAAATACAGAGAATAGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAAAATGGCACTGCATACCTAGTAAATAAATACAGAGAATAGGC  593

seq1  CATCCTGGACATATTGCGTCCATGCCGAACGATCTCGTTCTCTTCATCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGACATATTGCGTCCATGCCGAACGATCTCGTTCTCTTCATCTT  643

seq1  CCCATTTCTCGATTTCACAGTCAGCATCAGAGGAGAGCAATCCCAGCTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCTCGATTTCACAGTCAGCATCAGAGGAGAGCAATCCCAGCTTC  693

seq1  AGCCCGAGCTTTGCTATCTTGGCTTGCTCCTAGGAACACAAACACCCGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGAGCTTTGCTATCTTGGCTTGCTCCTAGGAACACAAACACCCGGG  743

seq1  AATCACAGGTCTGTCCTCGGAAGGAGGGTTTCACAACTGTCTCACTATTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGGTCTGTCCTCGGAAGGAGGGTTTCACAACTGTCTCACTATTG  793

seq1  ATACAAGACTGTTACACACCCAGAGAGCTTACCTCCGAGTCAGGTTTGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGACTGTTACACACCCAGAGAGCTTACCTCCGAGTCAGGTTTGTC  843

seq1  GGGCTTTAGTGACTTCAGGTTTGCACTATTCTTCTGTGACAATAAAAAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTAGTGACTTCAGGTTTGCACTATTCTTCTGTGACAATAAAAAGA  893

seq1  TAGTTTTAGCATTTAATTGTGAGGCAGGTCGTCAGTAATAGAAAGCATGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAGCATTTAATTGTGAGGCAGGTCGTCAGTAATAGAAAGCATGC  943

seq1  CAACTTGTAAGGAACCCTAACTTTACCATTCCCAGCAGGTAATTAAATTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTAAGGAACCCTAACTTTACCATTCCCAGCAGGTAATTAAATTA  993

seq1  GGCAGTTAACTACACTTGTAAATGTTCTACTGGGTGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTAACTACACTTGTAAATGTTCTACTGGGTGAATTC  1034