BAC Information

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BAC

Clone NameB6Ng01-010L18
Chromosome4 (Build37)
Map Location 141,894,699 - 142,010,287
singlet/doubletdoublet
Overlap geneEG665983
Upstream geneGm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik, Fblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51, 9030409G11Rik
Downstream geneLOC546484, 6330411D24Rik, Prdm2, LOC666018, EG626575, LOC433776, Pdpn, Lrrc38, LOC621961, Pramel1, 4732496O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010L18.bB6Ng01-010L18.g
ACCDH846318DH846319
length3411,045
definitionDH846318|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L18, 5' end.DH846319|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,009,947 - 142,010,287)(141,894,699 - 141,895,745)
sequence
ttttgactaaaataaggcacctttgagagttcttgagccttagggatcta
cttgttcacctttaagcctttcatgaaatgaaatttaggtgtgcctacct
acagttacatgaaactttgcagtaggggtgggtcctgaaaacctcatggt
ttgttagacattgctcccacgtgtgagtatcaatgatgatggtagtgtgt
gcttccacgactcattggctgcttcctggcctcagagatgcagtgaaccc
aaggtaagtgagactgaaaccaagacaccactcacagctcacagtagact
ttctcttctcttctcttctcttctcttctcttctcttatct
gaattccagatgctagctggatatgtccttacagggagagaggacattta
acttgagtcctggttaccaggctatgtgaccacctcaagggagacagagg
tgggggctgtaaggcttatggacaccaggacatgcagacccagaccagag
aggaagcagtcctacctcgccagtctcaggacaagattttctgggttaag
cacctctcaaccccactcttgctctggaaaggcttctgggttcccacggc
tttcgggccccatactttaccagcctagtaacatcccaagtccctgagac
ggaccttgaaggatggctggcgtccttgctagatggatgtgctgatggta
aagtccagggagaaggctagacaggaaccaaaggctgagggctaaataaa
aggtgttttaactcaccagtaacaaggggccgtggagggacaaattagat
ctgaaagggcaggcaagaccttgcccattcaacaacgggcacggggtgta
tctgctttacagccacggactttgttgtgaggtgactgagccaggtgtcc
agtgtccatttctgcctctagggtttgttttctagttttacacagtgagc
tacgtaaggtttgccttgagatctctccccacaatcctgtctgtcagatt
tctggtaccctccctccagtgctccaagtcctcagctttggttgacgtgt
ccctggaggaggcttagtgagccccagatgtggggatgaacagtgggtga
aggaaggaatgaacaaatgtgcctcgcagacagggctctcatctctacgt
aaaatcgaggggttcgagagatggctcagcagttaggatcacttgctgct
cttgcagaggacccgagtttgggcctctttgctcatgtccgatggctcac
aatcacctgtcactgcagcaccaaggcatctgatgtccttttgagcctct
gcaggcacctgggaatcatttgcacacacccacataatgaagaagcaaat
tctaaaaaaaaaaaaaaaatcaagtcactttaaattttctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_142009947_142010287
seq2: B6Ng01-010L18.b_51_391 (reverse)

seq1  AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAAGTCTACTG  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAAGTCTACTG  50

seq1  TGAGCTGTGAGTGGTGTCTTGGTTTCAGTCTCACTTACCTTGGGTTCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTGAGTGGTGTCTTGGTTTCAGTCTCACTTACCTTGGGTTCACT  100

seq1  GCATCTCTGAGGCCAGGAAGCAGCCAATGAGTCGTGGAAGCACACACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTGAGGCCAGGAAGCAGCCAATGAGTCGTGGAAGCACACACTAC  150

seq1  CATCATCATTGATACTCACACGTGGGAGCAATGTCTAACAAACCATGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATTGATACTCACACGTGGGAGCAATGTCTAACAAACCATGAGG  200

seq1  TTTTCAGGACCCACCCCTACTGCAAAGTTTCATGTAACTGTAGGTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGACCCACCCCTACTGCAAAGTTTCATGTAACTGTAGGTAGGCA  250

seq1  CACCTAAATTTCATTTCATGAAAGGCTTAAAGGTGAACAAGTAGATCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAAATTTCATTTCATGAAAGGCTTAAAGGTGAACAAGTAGATCCCT  300

seq1  AAGGCTCAAGAACTCTCAAAGGTGCCTTATTTTAGTCAAAA  341
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCAAGAACTCTCAAAGGTGCCTTATTTTAGTCAAAA  341

seq1: chr4_141894699_141895745
seq2: B6Ng01-010L18.g_67_1111

seq1  GAATTCCAGATGCTAGCTGGATATGTCCTTACAGGGAGAGAGGACATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGCTAGCTGGATATGTCCTTACAGGGAGAGAGGACATTTA  50

seq1  ACTTGAGTCCTGGTTACCAGGCTATGTGACCACCTCAAGGGAGACAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTCCTGGTTACCAGGCTATGTGACCACCTCAAGGGAGACAGAGG  100

seq1  TGGGGGCTGTAAGGCTTATGGACACCAGGACATGCAGACCCAGACCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTGTAAGGCTTATGGACACCAGGACATGCAGACCCAGACCAGAG  150

seq1  AGGAAGCAGTCCTACCTCGCCAGTCTCAGGACAAGATTTTCTGGGTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGTCCTACCTCGCCAGTCTCAGGACAAGATTTTCTGGGTTAAG  200

seq1  CACCTCTCAACCCCACTCTTGCTCTGGAAAGGCTTCTGGGTTCCCACGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCAACCCCACTCTTGCTCTGGAAAGGCTTCTGGGTTCCCACGGC  250

seq1  TTTCGGGCCCCATACTTTACCAGCCTAGTAACATCCCAAGTCCCTGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGGCCCCATACTTTACCAGCCTAGTAACATCCCAAGTCCCTGAGAC  300

seq1  GGACCTTGAAGGATGGCTGGCGTCCTTGCTAGATGGATGTGCTGATGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTGAAGGATGGCTGGCGTCCTTGCTAGATGGATGTGCTGATGGTA  350

seq1  AAGTCCAGGGAGAAGGCTAGACAGGAACCAAAGGCTGAGGGCTAAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGGGAGAAGGCTAGACAGGAACCAAAGGCTGAGGGCTAAATAAA  400

seq1  AGGTGTTTTAACTCACCAGTAACAAGGGGCCGTGGAGGGACAAATTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTTAACTCACCAGTAACAAGGGGCCGTGGAGGGACAAATTAGAT  450

seq1  CTGAAAGGGCAGGCAAGACCTTGCCCATTCAACAACGGGCACGGGGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGGCAGGCAAGACCTTGCCCATTCAACAACGGGCACGGGGTGTA  500

seq1  TCTGCTTTACAGCCACGGACTTTGTTGTGAGGTGACTGAGCCAGGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTACAGCCACGGACTTTGTTGTGAGGTGACTGAGCCAGGTGTCC  550

seq1  AGTGTCCATTTCTGCCTCTAGGGTTTGTTTTCTAGTTTTACACAGTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCATTTCTGCCTCTAGGGTTTGTTTTCTAGTTTTACACAGTGAGC  600

seq1  TACGTAAGGTTTGCCTTGAGATCTCTCCCCACAATCCTGTCTGTCAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTAAGGTTTGCCTTGAGATCTCTCCCCACAATCCTGTCTGTCAGATT  650

seq1  TCTGGTACCCTCCCTCCAGTGCTCCAAGTCCTCAGCTTTGGTTGACGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACCCTCCCTCCAGTGCTCCAAGTCCTCAGCTTTGGTTGACGTGT  700

seq1  CCCTGGAGGAGGCTTAGTGAGCCCCAGATGTGGGGATGAACAGTGGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGGAGGCTTAGTGAGCCCCAGATGTGGGGATGAACAGTGGGTGA  750

seq1  AGGAAGGAATGAACAAATGTGCCTCGCAGACAGGGCCCTCATCTCTACGT  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGAAGGAATGAACAAATGTGCCTCGCAGACAGGGCTCTCATCTCTACGT  800

seq1  AAAATCGAGGGGTTCGAGAGATGGCTCAGCAGTTAGGATCACTTGCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCGAGGGGTTCGAGAGATGGCTCAGCAGTTAGGATCACTTGCTGCT  850

seq1  CTTGCAGAGGACCCGAGTTTGGGCCTCTTTGCTCATGTCCGATGGCTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGAGGACCCGAGTTTGGGCCTCTTTGCTCATGTCCGATGGCTCAC  900

seq1  AATCACCTGTCACTGCAGCACCAAGGCATCTGATGTCCTTTTTGAGCCTC  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATCACCTGTCACTGCAGCACCAAGGCATCTGATGTCC-TTTTGAGCCTC  949

seq1  TGCAGGCACCTGGG-ATCATTTGCACACACCCACATAATG-AGAAGCAAA  998
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  TGCAGGCACCTGGGAATCATTTGCACACACCCACATAATGAAGAAGCAAA  999

seq1  TCTTAAAAAAAAAAAAAAAAATCAAGTCAACTTTAAATTTTTCTTTTTT  1047
      | |  ||||||||||||||||||||||| |||||||| |||||||||||
seq2  T-TCTAAAAAAAAAAAAAAAATCAAGTC-ACTTTAAA-TTTTCTTTTTT  1045