BAC Information

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BAC

Clone NameB6Ng01-010N10
Chromosome4 (Build37)
Map Location 149,520,333 - 149,662,588
singlet/doubletdoublet
Overlap geneLOC435818, Car6, LOC100041882, Eno1, LOC666880
Upstream genePgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5
Downstream geneLOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010N10.bB6Ng01-010N10.g
ACCDH846392DH846393
length9991,058
definitionDH846392|Mus musculus domesticus DNA, BAC clone: B6Ng01-010N10, 5' end.DH846393|Mus musculus domesticus DNA, BAC clone: B6Ng01-010N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,661,588 - 149,662,588)(149,520,333 - 149,521,386)
sequence
gaattctactaaggagacaaaacattataggttgctaaagctcagagact
cagcacccctgacagtattccagcgctgagaggtactgttaaacgtagag
ttctattttttctgggaggactgacctttaagagcttaaatttctgttcc
acttttccccagtatttgaaatgactttgactgttttatgttccaagcaa
tcacaacatcctaaccaaaccccttaaaagtcacataataactagtttaa
aattaggacatgaccatgccttcaatgtcaagacaaatagtttactgtag
ttcctcaaacaagagttttatgaactagaaataactattttgtaatgtag
ccacataaagaaagatttcggagccgggcatggtggcgcgcgcctttaaa
atcccagcacttgggaggcagaggcaagtggatttctgagttcaaggcca
gcctggtctacaaatcgagttccaggacagccagggctatacagagatac
cctgtctcaaaaaaccaaccaaaaaaaaaaaaaaaaaggttttacagaaa
agacattgctcatggttgctaatatattagcaaattttaacaaattaaaa
acaattataggcaggtggtagtacacacctttaatcccacccctgggaga
catagagatctctgagtttgaggccagcctggactacagagtgaattcca
ggatagccagggcttcacagagaaagcctgtctcaaaagagcaatcacta
caacaaatctaatgatgtaattctggcacaaaaagtgtaagagtgggctg
gagagatggctcagcagttgctcttccaaaggtcatgagtcaaatccaga
ggtcctgagttcaattcccagaaccacatgatggctcacaaccatctgta
atgagatctgactctctcttctcgagtgtctgaagacagctacagtgtac
ttacatataatgaataattaaatctttaaaaaatataataataaataaa
ttgggaagcgaaggaagaagattaggagttcaaggttatccttggctaca
tagtggattccagcttagcctgggacacttaagaacccacctccaaaatc
caaaaccaatctcctcccctagaaatgacacttgagtgaatccagatgga
aatgtgttcaggggaggtgagtctcgatggggagggttttaagttgtgag
agcagaggtgaaaaggacaggactgtgcaagggttcttctagccccaggg
gacagacagttgcatcatatctgagatcactgtgtgagcggtttgtgtgg
tgactcctgaacaccagtaatatgagtctctctctgccttcacctctctg
ctcactgcaaaaacttctctgaccaagattgaaagcagcactagtatata
agcgtaaacacatttagagggcagtttgaggatatgaacttttaggaaaa
cgataggtttgccccttggcccttacctctgtggcccaaagacacaggtt
ttagggtatcacagatccaaatcacagcaattacaattatttactaatta
cctctagtcattattcctaaatacttaaatttataagtatacttagaaat
aataaggtcatgggctaaggagacggctcagtgggtaaaatgtttgccac
accagcattaggacctgagtttgagttcttataacccatgtgacagctgg
acatggtagcatgggtctgaatcccgttgatcatatgtaacatgtagttt
ctactaccctgctttaaattccagacggaccacactaccagccactaccc
tggtccctttggacctgcagacgaaagacacacacacattagcttatttt
taatatgctttttagttcaatggccaggcacttctaagcctcctgcagct
aacctgcccttatcttcactcccagctcaacacctttaactctgccctca
ccgtagctggctcagttacctttactgctagctcagcaactctaatctgc
ccctcagcttagtttgcgtttctaatcctcccgcctgctaagccaaggct
cagtcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149661588_149662588
seq2: B6Ng01-010N10.b_48_1046 (reverse)

seq1  TTTATTTATTTATTAT-TTTTTTAAAGATTTATTTATTCATTATATGTAA  49
      |||||||| ||||||| ||||||||||||||| |||||||||||||||||
seq2  TTTATTTA-TTATTATATTTTTTAAAGATTTAATTATTCATTATATGTAA  49

seq1  GTACACTGTAGCTGTCTTCAGACACTCGAGAAGAGAGAGTCAGATCTCAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTGTAGCTGTCTTCAGACACTCGAGAAGAGAGAGTCAGATCTCAT  99

seq1  TACAGATGGTTGTGAGCCATCATGTGGTTGCTGGGAATTGAACTCAGGAC  149
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACAGATGGTTGTGAGCCATCATGTGGTT-CTGGGAATTGAACTCAGGAC  148

seq1  CTCTGGATTTGAACTCATGACCTTTGGAAGAGCAACTGCTGAGCCATCTC  199
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATTTG-ACTCATGACCTTTGGAAGAGCAACTGCTGAGCCATCTC  197

seq1  TCCAGCCCACTCTTACACTTTTTGTGCCAGAATTACATCATTAGATTTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCACTCTTACACTTTTTGTGCCAGAATTACATCATTAGATTTGT  247

seq1  TGTAGTGATTGCTCTTTTGAGACAGGCTTTCTCTGTGAAGCCCTGGCTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGATTGCTCTTTTGAGACAGGCTTTCTCTGTGAAGCCCTGGCTAT  297

seq1  CCTGGAATTCACTCTGTAGTCCAGGCTGGCCTCAAACTCAGAGATCTCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATTCACTCTGTAGTCCAGGCTGGCCTCAAACTCAGAGATCTCTA  347

seq1  TGTCTCCCAGGGGTGGGATTAAAGGTGTGTACTACCACCTGCCTATAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCAGGGGTGGGATTAAAGGTGTGTACTACCACCTGCCTATAATT  397

seq1  GTTTTTAATTTGTTAAAATTTGCTAATATATTAGCAACCATGAGCAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAATTTGTTAAAATTTGCTAATATATTAGCAACCATGAGCAATGT  447

seq1  CTTTTCTGTAAAACCTTTTTTTTTTTTTTTTTGGTTGGTTTTTTGAGACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTAAAACCTTTTTTTTTTTTTTTTTGGTTGGTTTTTTGAGACA  497

seq1  GGGTATCTCTGTATAGCCCTGGCTGTCCTGGAACTCGATTTGTAGACCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTCTGTATAGCCCTGGCTGTCCTGGAACTCGATTTGTAGACCAG  547

seq1  GCTGGCCTTGAACTCAGAAATCCACTTGCCTCTGCCTCCCAAGTGCTGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTTGAACTCAGAAATCCACTTGCCTCTGCCTCCCAAGTGCTGGG  597

seq1  ATTTTAAAGGCGCGCGCCACCATGCCCGGCTCCGAAATCTTTCTTTATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGGCGCGCGCCACCATGCCCGGCTCCGAAATCTTTCTTTATGT  647

seq1  GGCTACATTACAAAATAGTTATTTCTAGTTCATAAAACTCTTGTTTGAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACATTACAAAATAGTTATTTCTAGTTCATAAAACTCTTGTTTGAGG  697

seq1  AACTACAGTAAACTATTTGTCTTGACATTGAAGGCATGGTCATGTCCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGTAAACTATTTGTCTTGACATTGAAGGCATGGTCATGTCCTAA  747

seq1  TTTTAAACTAGTTATTATGTGACTTTTAAGGGGTTTGGTTAGGATGTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACTAGTTATTATGTGACTTTTAAGGGGTTTGGTTAGGATGTTGT  797

seq1  GATTGCTTGGAACATAAAACAGTCAAAGTCATTTCAAATACTGGGGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTTGGAACATAAAACAGTCAAAGTCATTTCAAATACTGGGGAAAA  847

seq1  GTGGAACAGAAATTTAAGCTCTTAAAGGTCAGTCCTCCCAGAAAAAATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAGAAATTTAAGCTCTTAAAGGTCAGTCCTCCCAGAAAAAATAG  897

seq1  AACTCTACGTTTAACAGTACCTCTCAGCGCTGGAATACTGTCAGGGGTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTACGTTTAACAGTACCTCTCAGCGCTGGAATACTGTCAGGGGTGC  947

seq1  TGAGTCTCTGAGCTTTAGCAACCTATAATGTTTTGTCTCCTTAGTAGAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTCTGAGCTTTAGCAACCTATAATGTTTTGTCTCCTTAGTAGAAT  997

seq1  TC  1001
      ||
seq2  TC  999

seq1: chr4_149520333_149521386
seq2: B6Ng01-010N10.g_79_1136

seq1  TTGGGAAGCGAAGGAAGAAGATTAGGAGTTCAAGGTTATCCTTGGCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGCGAAGGAAGAAGATTAGGAGTTCAAGGTTATCCTTGGCTACA  50

seq1  TAGTGGATTCCAGCTTAGCCTGGGACACTTAAGAACCCACCTCCAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATTCCAGCTTAGCCTGGGACACTTAAGAACCCACCTCCAAAATC  100

seq1  CAAAACCAATCTCCTCCCCTAGAAATGACACTTGAGTGAATCCAGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAATCTCCTCCCCTAGAAATGACACTTGAGTGAATCCAGATGGA  150

seq1  AATGTGTTCAGGGGAGGTGAGTCTCGATGGGGAGGGTTTTAAGTTGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTCAGGGGAGGTGAGTCTCGATGGGGAGGGTTTTAAGTTGTGAG  200

seq1  AGCAGAGGTGAAAAGGACAGGACTGTGCAAGGGTTCTTCTAGCCCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGTGAAAAGGACAGGACTGTGCAAGGGTTCTTCTAGCCCCAGGG  250

seq1  GACAGACAGTTGCATCATATCTGAGATCACTGTGTGAGCGGTTTGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGTTGCATCATATCTGAGATCACTGTGTGAGCGGTTTGTGTGG  300

seq1  TGACTCCTGAACACCAGTAATATGAGTCTCTCTCTGCCTTCACCTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTGAACACCAGTAATATGAGTCTCTCTCTGCCTTCACCTCTCTG  350

seq1  CTCACTGCAAAAACTTCTCTGACCAAGATTGAAAGCAGCACTAGTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCAAAAACTTCTCTGACCAAGATTGAAAGCAGCACTAGTATATA  400

seq1  AGCGTAAACACATTTAGAGGGCAGTTTGAGGATATGAACTTTTAGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTAAACACATTTAGAGGGCAGTTTGAGGATATGAACTTTTAGGAAAA  450

seq1  CGATAGGTTTGCCCCTTGGCCCTTACCTCTGTGGCCCAAAGACACAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAGGTTTGCCCCTTGGCCCTTACCTCTGTGGCCCAAAGACACAGGTT  500

seq1  TTAGGGTATCACAGATCCAAATCACAGCAATTACAATTATTTACTAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTATCACAGATCCAAATCACAGCAATTACAATTATTTACTAATTA  550

seq1  CCTCTAGTCATTATTCCTAAATACTTAAATTTATAAGTATACTTAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTCATTATTCCTAAATACTTAAATTTATAAGTATACTTAGAAAT  600

seq1  AATAAGGTCATGGGCTAAGGAGACGGCTCAGTGGGTAAAATGTTTGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTCATGGGCTAAGGAGACGGCTCAGTGGGTAAAATGTTTGCCAC  650

seq1  ACCAGCATTAGGACCTGAGTTTGAGTTCTTATAACCCATGTGACAGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATTAGGACCTGAGTTTGAGTTCTTATAACCCATGTGACAGCTGG  700

seq1  ACATGGTAGCATGGGTCTGAATCCCGTTGATCATATGTAACATGTAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAGCATGGGTCTGAATCCCGTTGATCATATGTAACATGTAGTTT  750

seq1  CTACTACCCTGCTTTAAATTCCAGACGGACCACACTACCAGCCACTACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACCCTGCTTTAAATTCCAGACGGACCACACTACCAGCCACTACCC  800

seq1  TGGTCCCTTTGGACCTGCAGACGAAAGACACACACACATTAGCTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCTTTGGACCTGCAGACGAAAGACACACACACATTAGCTTATTTT  850

seq1  TAATATGCTTTTTAGTTCAATGGCCAGGCACTTCTAAGCCTCCTGCAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGCTTTTTAGTTCAATGGCCAGGCACTTCTAAGCCTCCTGCAGCT  900

seq1  AACCTGCCCTTATCTTCACTCCCAGCTCAACACCTTTAACTCTGCCCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCCTTATCTTCACTCCCAGCTCAACACCTTTAACTCTGCCCTCA  950

seq1  ACGTAGCT-GCTCAGTTACCTTTACTGCTAGCTCAGCAACTCTAAATCTG  999
       ||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  CCGTAGCTGGCTCAGTTACCTTTACTGCTAGCTCAGCAACTCT-AATCTG  999

seq1  -CCCTCAGCTTAG-TTGCGTTTCTAAT-CTCCCGCCTGCTAAG-CTAGGC  1045
       |||||||||||| ||||||||||||| ||||||||||||||| | ||||
seq2  CCCCTCAGCTTAGTTTGCGTTTCTAATCCTCCCGCCTGCTAAGCCAAGGC  1049

seq1  CCAGTCAGG  1054
       ||||||||
seq2  TCAGTCAGG  1058