BAC Information

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BAC

Clone NameB6Ng01-014B15
Chromosome4 (Build37)
Map Location 120,890,979 - 121,036,405
singlet/doubletdoublet
Overlap geneOTTMUSG00000008911
Upstream geneFoxo6, Scmh1, Slfnl1, Ctps, EG667063, Cited4, Kcnq4, Nfyc, Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf
Downstream geneEG666914, LOC666921, LOC666927, LOC666931, LOC666937
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014B15.bB6Ng01-014B15.g
ACCDH848740DH848741
length1,1251,022
definitionDH848740|Mus musculus domesticus DNA, BAC clone: B6Ng01-014B15, 5' end.DH848741|Mus musculus domesticus DNA, BAC clone: B6Ng01-014B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,035,775 - 121,036,405)(120,890,979 - 120,892,012)
sequence
gaattcctcatctttgaggaacatgcctcccagtgatgaaacaaaatgta
cagaaataagggaaacatgtcagacggtgagggtgcgctaaaaacatgca
caaagcctggaaaaagatagagcctgaagtgtaagcttgtgcatggagag
agtaaggttaggacaggattcacctagacaactgagcagagcttagagga
tgagggaatttgccatatgaatgtgtggtcaaaggagaagcagaggcaag
gtcatgggcctgatatacaccaaagaaaaggatccaggttcttagactaa
ggagtagacaaaatatgagatgtttttaagtgtcagattagaagctatgt
gtggtggtgaaccaagtattcatgaggaggagggatatggatctctgtga
atttgatgtgttaaggtgagcctgtcaacatggtttgtttcaggtcatcc
ataatgaggagagagcaggtgacaagggaagagggaaaagtgttgagatt
aggtttcatgttggggatcatttagtaccatcttggtcatctgagatttc
tagaatatttgtgatctaggtcctattggtctgttacaaggaccagcctc
tgcttgaagaggggttctgagaaaagaggtgtttgggatcaccaaaatat
atgacgtgaaatcaaattgtgaatccatgctgttgacctgtgttctgctt
catccagcttttcaggtctgcttctctctatgttctactttctataatga
ggtttctctgtctatattctgcttccttgctactctaaaagatctctctg
tccatgccatgctggtatgcatgtgtgtgtgcttgtgtgcatacatgctt
gcatggatgcctgtgtgtctcttttccaagcagttcctaaaagatcctct
gggtacctcatctactgcaaaacacagtgccagtctcttatgatacatat
cactgcagtcatttacttcagggttttttcttatgattcagcatccatga
ctagagactctgcaggtcctaacagcatagatgacgatttaagcacagct
acctagcaggtgcaaaccaggattcagcatgactccttttcttgagaaac
tcagactgtctcctatgtatcttgc
gaattctttggtcatgaagtgtttggtgtctcttgataggactgctgtca
aataaaatttaacaaataacagtcacatttttatagccaagtatcacttg
aaggtataaagtgacatttgaatcatatatttagatatttcattagaaat
gaagccattcaacgtgactcttcctccctcctctctcctagcattactgt
caccaccatctttaatatttggctctttagacagaaagagttttgctaag
cagacctggctggtctggaacttgctacataaaacagactggctttgaac
ttgaggcagcctgcctacttctgactcctgaatacttgtatttcaaacat
tatccgcacactgtattcttcccttcctttgtccactgaggattgaattt
agagtcttgcatttactcaacaggcattctgctacagagctataccttca
ttcctagccctttaacaatatttcctttaaattgaaacagggtctcatta
agtcaccaggtggttgtccttgaacttcttattaccctactcaagccttg
attgaaccttcagtaaaactgcttcagcccccagacagctgagattgcag
gcctgtctcaccaggcccagctccttatttatgttgacaaaggttctcat
attgcttgtctggcttccagtctgctacatagctcagaaatggccttgaa
ctcctgattctcctccttttactctctgtgctactatacccagtgtatgt
gctgttggagatttacatgagggctttgtacatgctagataagcactttg
ccaaatgagctacacctcagccctggctccaatcattaaaatgggggaaa
gtactatacatgtatgaaaatgtcacaatggagcctattaaatatgctaa
ccatgctagccataaaacatactaataaatattaatttttaaaatctaaa
agtagcattgtgattcatatctgtaatctgggaaattgaacaagagacgg
gagttcaactttattattccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_121035775_121036405
seq2: B6Ng01-014B15.b_554_1169 (reverse)

seq1  GCAAGATACATAGGGAAGACAAGGTCTGTGTCT-TCAGGAAA--GAGTCA  47
      ||||||||||||||  |||||  ||||| || | ||| ||||  ||||||
seq2  GCAAGATACATAGG--AGACA--GTCTGAGTTTCTCAAGAAAAGGAGTCA  46

seq1  TGCTGATATCTGTGTTTCTGCAACCTGCTAGGTAGCTGTGCTTACATC-T  96
      |||||| |||   |||  ||| |||||||||||||||||||||| ||| |
seq2  TGCTGA-ATCCTGGTT--TGC-ACCTGCTAGGTAGCTGTGCTTAAATCGT  92

seq1  GTTCTATTCCTATTGCTGTTAGGACCTGCAGAGTCTCCTAGTCATGGGAT  146
        ||||       ||||||||||||||||||||||| |||||||| ||||
seq2  CATCTA-------TGCTGTTAGGACCTGCAGAGTCT-CTAGTCAT-GGAT  133

seq1  GCTGATTCATAAGAAAAAAACCCTGGAGTAAATGACTGCAGTGATATGTA  196
      ||||| ||||||| ||||||||||| ||||||||||||||||||||||||
seq2  GCTGAATCATAAG-AAAAAACCCTGAAGTAAATGACTGCAGTGATATGTA  182

seq1  TCATAAGAGACTGGCACTGTGTTTTGCAGTAGATGAGGTACCCAGAGGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAGACTGGCACTGTGTTTTGCAGTAGATGAGGTACCCAGAGGAT  232

seq1  CTTTTTAGGAACTGCTTGGAAAAGAGACACACAGGCATCCATGCAAGCAT  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTTAGGAACTGCTTGGAAAAGAGACACACAGGCATCCATGCAAGCAT  281

seq1  GTATGCACACAAGCACACACACATGCATACCAGCATGGCATGGACAGAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCACACAAGCACACACACATGCATACCAGCATGGCATGGACAGAGA  331

seq1  GATCTTTTAGAGTAGCAAGGAAGCAGAATATAGACAGAGAAACCTCATTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTAGAGTAGCAAGGAAGCAGAATATAGACAGAGAAACCTCATTA  381

seq1  TAGAAAGTAGAACATAGAGAGAAGCAGACCTGAAAAGCTGGATGAAGCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTAGAACATAGAGAGAAGCAGACCTGAAAAGCTGGATGAAGCAG  431

seq1  AACACAGGTCAACAGCATGGATTCACAATTTGATTTCACGTCATATATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGTCAACAGCATGGATTCACAATTTGATTTCACGTCATATATTT  481

seq1  TGGTGATCCCAAACACCTCTTTTCTCAGAACCCCTCTTCAAGCAGAGGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATCCCAAACACCTCTTTTCTCAGAACCCCTCTTCAAGCAGAGGCT  531

seq1  GGTCCTTGTAACAGACCAATAGGACCTAGATCACAAATATTCTAGAAATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGTAACAGACCAATAGGACCTAGATCACAAATATTCTAGAAATC  581

seq1  TCAGATGACCAAGATGGTACTAAATGATCCCCAAC  631
      |||||||||||||||||||||||||||||||||||
seq2  TCAGATGACCAAGATGGTACTAAATGATCCCCAAC  616

seq1: chr4_120890979_120892012
seq2: B6Ng01-014B15.g_69_1090

seq1  GAATTCTTTGGTCATGAAGTGTTTGGTGTCTCTTGATAGGACTGCTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTCATGAAGTGTTTGGTGTCTCTTGATAGGACTGCTGTCA  50

seq1  AATAAAATTTAACAAATAACAGTCACATTTTTATAGCCAAGTATCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTAACAAATAACAGTCACATTTTTATAGCCAAGTATCACTTG  100

seq1  AAGGTATAAAGTGACATTTGAATCATATATTTAGATATTTCATTAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATAAAGTGACATTTGAATCATATATTTAGATATTTCATTAGAAAT  150

seq1  GAAGCCATTCAACGTGACTCTTCCTCCCTCCTCTCTCCTAGCATTACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCATTCAACGTGACTCTTCCTCCCTCCTCTCTCCTAGCATTACTGT  200

seq1  CACCACCATCTTTAATATTTGGCTCTTTAGACAGAAAGAGTTTTGCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCATCTTTAATATTTGGCTCTTTAGACAGAAAGAGTTTTGCTAAG  250

seq1  CAGACCTGGCTGGTCTGGAACTTGCTACATAAAACAGACTGGCTTTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTGGCTGGTCTGGAACTTGCTACATAAAACAGACTGGCTTTGAAC  300

seq1  TTGAGGCAGCCTGCCTACTTCTGACTCCTGAATACTTGTATTTCAAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCAGCCTGCCTACTTCTGACTCCTGAATACTTGTATTTCAAACAT  350

seq1  TATCCGCACACTGTATTCTTCCCTTCCTTTGTCCACTGAGGATTGAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGCACACTGTATTCTTCCCTTCCTTTGTCCACTGAGGATTGAATTT  400

seq1  AGAGTCTTGCATTTACTCAACAGGCATTCTGCTACAGAGCTATACCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTGCATTTACTCAACAGGCATTCTGCTACAGAGCTATACCTTCA  450

seq1  TTCCTAGCCCTTTAACAATATTTCCTTTAAATTGAAACAGGGTCTCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCCCTTTAACAATATTTCCTTTAAATTGAAACAGGGTCTCATTA  500

seq1  AGTCACCAGGTGGTTGTCCTTGAACTTCTTATTACCCTACTCAAGCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCAGGTGGTTGTCCTTGAACTTCTTATTACCCTACTCAAGCCTTG  550

seq1  ATTGAACCTTCAGTAAAACTGCTTCAGCCCCCAGACAGCTGAGATTGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCTTCAGTAAAACTGCTTCAGCCCCCAGACAGCTGAGATTGCAG  600

seq1  GCCTGTCTCACCAGGCCCAGCTCCTTATTTATGTTGACAAAGGTTCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTCACCAGGCCCAGCTCCTTATTTATGTTGACAAAGGTTCTCAT  650

seq1  ATTGCTTGTCTGGCTTCCAGTCTGCTACATAGCTCAGAAATGGCCTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGTCTGGCTTCCAGTCTGCTACATAGCTCAGAAATGGCCTTGAA  700

seq1  CTCCTGATTCTCCTCCTTTTACTCTCTGTGCTACTATACCCAGTGTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATTCTCCTCCTTTTACTCTCTGTGCTACTATACCCAGTGTATGT  750

seq1  GCTGTTGGAGATTTACATGAGGGCTTTGTACATGCTAGATAAGCACTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGGAGATTTACATGAGGGCTTTGTACATGCTAGATAAGCACTTTG  800

seq1  CCAAATGAGCTACACCTCAGCCCTGGCTCCAATCATTAAAATGGGGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAAATGAGCTACACCTCAGCCCTGGCTCCAATCATTAAAATGGGGG-AA  849

seq1  AGTACTATACATGTATGAAAATGTCACAATGGAGCCTATTAAATATGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTATACATGTATGAAAATGTCACAATGGAGCCTATTAAATATGCTA  899

seq1  ACCATGCTAAGCCATAAAAACATACTAATAAAATATTAATTTTTAAAAAT  950
      |||||||| |||||| ||||||||||||| |||||||||||||| |||||
seq2  ACCATGCT-AGCCAT-AAAACATACTAAT-AAATATTAATTTTT-AAAAT  945

seq1  CTAAAAAGTAGGCATTGTGATTCATATCTGTAATCTTGGGAAATTGAAAC  1000
      || ||||||| |||||||||||||||||||||||| |||||||||| |||
seq2  CT-AAAAGTA-GCATTGTGATTCATATCTGTAATC-TGGGAAATTG-AAC  991

seq1  AAGAGGACCGGGAGTTCAACTATATTAATTCCAG  1034
      |||||   ||||||||||||| |||| |||||||
seq2  AAGAG--ACGGGAGTTCAACTTTATT-ATTCCAG  1022