BAC Information

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BAC

Clone NameB6Ng01-014D02
Chromosome4 (Build37)
Map Location 54,631,673 - 54,632,896
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280, LOC666901
Downstream geneLOC100041303, LOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014D02.bB6Ng01-014D02.g
ACCDH848806DH848807
length1,196459
definitionDH848806|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D02, 5' end.DH848807|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgcagtctcgcacatcagtgattcttaaggtcttcagatacc
tggaacttctgtctactaaaaagaacggagctattaatgtccttcacaga
aaaagaaagacgaccaggcttctgtgaatgtgggtcagaaagcaccaggg
aggtaatgacttggtctgttctgtgttctccgtccctccttggtccttcc
atgaaagccttctgtcagaaaccctgcctggttatggcatgatagccctt
ttattctacaaattccaggctatgacatacgcacagaatcacttaagtag
gtctctcttcatgttcctaggaatcttactgacagagcagtccatattcc
caggcaatcacatttctccttgacttctccccaggatgagcttgttgttt
gataccgctatagggaagtcttcatagcatcttggtgaatctggctgcta
gcaagctcttagaggtgagcccagcttctcagtgccagggcaacaccagc
tcacaagcatgcattcaccttctatcctgcctctcagcactgagtgaggt
ggaggccttacagttagcacatgtgccccattgaaatcagtacaagtttg
tggaattcatttatggaaagagcagagaagattctgtaatcctgtctcag
caatttgacttctagggattacttcttgggaaatcactgggaagtgtttg
gtcatttgtttggctgttgctaagtacagaccatgtgctaacactgccct
aatttctgaaaatatatagacttgtataaatatcatctattttgtgtaca
aaaaaacagtaatagccccattttgtagacgaggaaagcaaggaataaaa
gttgtcctatccatgatcatgttgctgcttcagatgagcagcaggcctga
gagacagatgctagctatggtctttacttcagtttctctattggcagtag
ctcaatttacagagctcagcataaacagagaggaggagacttgggggaga
gggacgtgagaaggagaggagaatctttagaaagaagtgttttaaaacaa
aagtagttaagctatgcagtagtaagcctgaaacaggcagacatcatgac
catggctttatccagccgtggaagacaaggccagaagaatctctgtttgt
tcctggggaaattcggccattatggaaccttgtttcaaaggaaaaa

caaaggcttactctgatatctcattatgattttgcaatttaaaaaatgtt
attggaaactcatctccatttttaataaccagacctatttggttgtaggt
gacagaaatatgtcatttttaggactatctcatggacatacatcagatgg
actctatgttctaccacaaggacacttgcagtgtttattgttcctcttcc
ccatagccaggaatggaaccagactagatgcctatcaacagttgttgtat
aataaaaatgtgcaaatacacaatggaatcacattcaactataaagggaa
gtgggattatgaaattcacaagaaaacagatacacttggaaaacattgtg
ttcagagttgtaatttagtcttcacaagacagaactcacatgttctatct
tatgtgatgatcctagcttctgagtggtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54631673_54632896
seq2: B6Ng01-014D02.b_47_1242

seq1  GAATTCCTTGCAGTCTCGCACATCAGTGATTCTTAAGGTCTTCAGATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCAGTCTCGCACATCAGTGATTCTTAAGGTCTTCAGATACC  50

seq1  TGGAACTTCTGTCTACTAAAAAGAACGGAGCTATTAATGTCCTTCACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTCTGTCTACTAAAAAGAACGGAGCTATTAATGTCCTTCACAGA  100

seq1  AAAAGAAAGACGACCAGGCTTCTGTGAATGTGGGTCAGAAAGCACCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGACGACCAGGCTTCTGTGAATGTGGGTCAGAAAGCACCAGGG  150

seq1  AGGTAATGACTTGGTCTGTTCTGTGTTCTCCGTCCCTCCTTGGTCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATGACTTGGTCTGTTCTGTGTTCTCCGTCCCTCCTTGGTCCTTCC  200

seq1  ATGAAAGCCTTCTGTCAGAAACCCTGCCTGGTTATGGCATGATAGCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCCTTCTGTCAGAAACCCTGCCTGGTTATGGCATGATAGCCCTT  250

seq1  TTATTCTACAAATTCCAGGCTATGACATACGCACAGAATCACTTAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTACAAATTCCAGGCTATGACATACGCACAGAATCACTTAAGTAG  300

seq1  GTCTCTCTTCATGTTCCTAGGAATCTTACTGACAGAGCAGTCCATATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTTCATGTTCCTAGGAATCTTACTGACAGAGCAGTCCATATTCC  350

seq1  CAGGCAATCACATTTCTCCTTGACTTCTCCCCAGGATGAGCTTGTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAATCACATTTCTCCTTGACTTCTCCCCAGGATGAGCTTGTTGTTT  400

seq1  GATACCGCTATAGGGAAGTCTTCATAGCATCTTGGTGAATCTGGCTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCGCTATAGGGAAGTCTTCATAGCATCTTGGTGAATCTGGCTGCTA  450

seq1  GCAAGCTCTTAGAGGTGAGCCCAGCTTCTCAGTGCCAGGGCAACACCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTTAGAGGTGAGCCCAGCTTCTCAGTGCCAGGGCAACACCAGC  500

seq1  TCACAAGCATGCATTCACCTTCTATCCTGCCTCTCAGCACTGAGTGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCATGCATTCACCTTCTATCCTGCCTCTCAGCACTGAGTGAGGT  550

seq1  GGAGGCCTTACAGTTAGCACATGTGCCCCATTGAAATCAGTACAAGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTTACAGTTAGCACATGTGCCCCATTGAAATCAGTACAAGTTTG  600

seq1  TGGAATTCATTTATGGAAAGAGCAGAGAAGATTCTGTAATCCTGTCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCATTTATGGAAAGAGCAGAGAAGATTCTGTAATCCTGTCTCAG  650

seq1  CAATTTGACTTCTAGGGATTACTTCTTGGGAAATCACTGGGAAGTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGACTTCTAGGGATTACTTCTTGGGAAATCACTGGGAAGTGTTTG  700

seq1  GTCATTTGTTTGGCTGTTGCTAAGTACAGACCATGTGCTAACACTGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGTTTGGCTGTTGCTAAGTACAGACCATGTGCTAACACTGCCCT  750

seq1  AATTTCTGAAAATATATAGACTTGTATAAATATCATCTATTTTGTGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGAAAATATATAGACTTGTATAAATATCATCTATTTTGTGTACA  800

seq1  AAAAAACAGTAATAGCCCCATTTTGTAGACGAGGAAAGCAAGGAATAAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAAAACAGTAATAGCCCCATTTTGTAGACGAGGAAAGCAAGGAAT-AAA  849

seq1  AGTTGTCCTATCCATGATCATGTTGCTGCTTCAAGATGAGCAGCAGGCCT  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTTGTCCTATCCATGATCATGTTGCTGCTTC-AGATGAGCAGCAGGCCT  898

seq1  GAGAGACAGATGCTAGCTATGGTCTTTACTTCAGGTTTCTCTATTGGCAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGAGACAGATGCTAGCTATGGTCTTTACTTCA-GTTTCTCTATTGGCAG  947

seq1  TAGCTCAATTTACAGAGCTCAGCATAAACAGAAGAGGAAGGAAGAACTTG  1000
      ||||||||||||||||||||||||||||||| ||||| ||||   |||||
seq2  TAGCTCAATTTACAGAGCTCAGCATAAACAG-AGAGG-AGGA--GACTTG  993

seq1  GGGGAAGAGGGACGTGAAGAAAGGGAGAAGGAGAAATCTTTAGAAAGAAG  1050
      |||| ||||||||||| ||||  |||| ||||| ||||||||||||||||
seq2  GGGG-AGAGGGACGTG-AGAA--GGAG-AGGAG-AATCTTTAGAAAGAAG  1037

seq1  TGTTTTAAAAACAAAAGTAAGTTAAAGCTATTGGCAGTAGTAAAAGGCCT  1100
      |||||| ||||||||||| |||| |||||||  ||||||||||   ||||
seq2  TGTTTT-AAAACAAAAGT-AGTT-AAGCTAT--GCAGTAGTAA---GCCT  1079

seq1  GAGACAGCCAGACATCATGACCCATGGCTTTAATCCCAGCACGTGGAGAG  1150
      || |||| |||||||||||| |||||||||||   ||||| ||||||   
seq2  GAAACAGGCAGACATCATGA-CCATGGCTTTA--TCCAGC-CGTGGAAGA  1125

seq1  CAGAGGCAGGAGGATCTCTGTTTGTTTCT--GGAGATTCAAGACTATATA  1198
      ||  | ||| || ||||||||||||| ||  ||| ||||  | | || ||
seq2  CAAGGCCAGAAGAATCTCTGTTTGTTCCTGGGGAAATTC--GGCCAT-TA  1172

seq1  GTGAGACCTTGTTTCAAAAAGAAAAA  1224
       ||  |||||||||| ||| ||||||
seq2  -TGGAACCTTGTTTC-AAAGGAAAAA  1196


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