BAC Information

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BAC

Clone NameB6Ng01-014G21
Chromosome4 (Build37)
Map Location 6,845,802 - 6,846,910
singlet/doubletsinglet
Overlap geneTox
Upstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414
Downstream geneLOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014G21.bB6Ng01-014G21.g
ACCDH848978DH848979
length1,091940
definitionDH848978|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G21, 5' end.DH848979|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcaggcattttcacaacacccttaggctctactgtagtttgg
gtcttaggtgtctcccaaagacccacactaaacactcagtcccagcttac
cacagtaggagaatggtattaaacacttggtcccagcattgagaggggac
tttaaaaagtaaggcacagtaggaattctaaggactaatgaactcagaag
ttgatgggatcccagcccctttctcttactcttttgttacctgcacagga
aggcattagttttgttctactgtacattcaactgtgatgttctgtcttga
tcagggtttaaagggatgggtccaagagattatagactgagagcccagag
aatcttcgctctgccagttggctttcacatggctttgttgtaataatgaa
agcctggctagtacagggggctcccatttcatacatttcagagaggaaca
attagcccagggaggtaaaaactcagttatgtaacttgccttggccacag
cgggctagagtacaagttcttctgtttgcaacattggctttatatttagc
catatcgatcataatcagaatgttctggaagctggagaaacagaatacag
gtcagagttgggtggagtgagtacttagaacagttcctatgaggaggtgc
tctttgagttaaattttatgtgtaagtaagtcatttagtgaaatggtttc
agtgtagcatgttccaaagagtggggcatcccaaggtatggagttcactc
tcttggaaggcatgggctgccaatgatagatagcctgttgcttatactgt
gagtagcagagagaaagcccagagagctagaagtctaatcagggcactaa
ctgcaacttgtacagtgaagttagggccattggacctgtactgtgtctca
tcctcagtttacagaaaaagagtttcaatttactcatttcagaccactgt
tcctcttcctggaaactatatgtttttacgctgtacaacacctaagtatc
aaactctacccagcagttgtctctgacaaatcatgaggtctttctgtcca
gaagttgtcagtgaaacattgagtggcataagtaagcactt

gaattctgttcttgtggctgtctttatttagatttgttgaaggattactt
tcttgctttttctagggtgcactttccatccttgtgttgatgttttcctg
ttattatcctttgaagggcttaattcgtggaaagatattgtgtgaatttg
gttttatcatggaatactttggtttctctatctatggtaattgagagttt
ttctgggtatagtagcctgggctggcatttatgttctctttatgtctgca
taacatctgttcaggatcttctgactttcatagtctctggtgagaagtct
ggtgtaattctaatatgcctgcctttatattttacttgacctttatccct
tattgcttatagtattctatctttatttagtgcatttttgttctgattat
tatgtttcaggaggaatttcttttctggtcctgtctatttggagttctgt
aggctttttgtatgttcatgggcatctcttctttaggtttaggaagtttt
cttctataatgttgttgtagatatttgctggccctttaagttgaaaatct
tcattctcaaccactcctattatccgtagtgttggtcttctcattgtgtc
ctggatttcctggatgttttttgttagggatctttttgcattttgcattt
tctttgattgtctgcccatgttctctatggaatcttctgcacctgagatt
ctctcttccatctcttgtattctcttgcttatgctcacatctatggttcc
agatttctttcctagggtttctatctccagtgttagctcacttggggttt
tctttattgtgtctacttccctttttaggttctggatggtttgttcaaat
ccatcgcctgtttgggtggtgtttcctttatttctttaaacacttctacc
tctttattaaagccctcttgatgttcttctaccaagatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6845802_6846910
seq2: B6Ng01-014G21.b_47_1137

seq1  GAATTCTCTCAGGCATTTTCACAACACCCTTAGGCTCTACTGTAGTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGGCATTTTCACAACACCCTTAGGCTCTACTGTAGTTTGG  50

seq1  GTCTTAGGTGTCTCCCAAAGACCCACACTAAACACTCAGTCCCAGCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGTGTCTCCCAAAGACCCACACTAAACACTCAGTCCCAGCTTAC  100

seq1  CACAGTAGGAGAATGGTATTAAACACTTGGTCCCAGCATTGAGAGGGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGGAGAATGGTATTAAACACTTGGTCCCAGCATTGAGAGGGGAC  150

seq1  TTTAAAAAGTAAGGCACAGTAGGAATTCTAAGGACTAATGAACTCAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTAAGGCACAGTAGGAATTCTAAGGACTAATGAACTCAGAAG  200

seq1  TTGATGGGATCCCAGCCCCTTTCTCTTACTCTTTTGTTACCTGCACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGATCCCAGCCCCTTTCTCTTACTCTTTTGTTACCTGCACAGGA  250

seq1  AGGCATTAGTTTTGTTCTACTGTACATTCAACTGTGATGTTCTGTCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTAGTTTTGTTCTACTGTACATTCAACTGTGATGTTCTGTCTTGA  300

seq1  TCAGGGTTTAAAGGGATGGGTCCAAGAGATTATAGACTGAGAGCCCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTTAAAGGGATGGGTCCAAGAGATTATAGACTGAGAGCCCAGAG  350

seq1  AATCTTCGCTCTGCCAGTTGGCTTTCACATGGCTTTGTTGTAATAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCGCTCTGCCAGTTGGCTTTCACATGGCTTTGTTGTAATAATGAA  400

seq1  AGCCTGGCTAGTACAGGGGGCTCCCATTTCATACATTTCAGAGAGGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGCTAGTACAGGGGGCTCCCATTTCATACATTTCAGAGAGGAACA  450

seq1  ATTAGCCCAGGGAGGTAAAAACTCAGTTATGTAACTTGCCTTGGCCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCCAGGGAGGTAAAAACTCAGTTATGTAACTTGCCTTGGCCACAG  500

seq1  CGGGCTAGAGTACAAGTTCTTCTGTTTGCAACATTGGCTTTATATTTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTAGAGTACAAGTTCTTCTGTTTGCAACATTGGCTTTATATTTAGC  550

seq1  CATATCGATCATAATCAGAATGTTCTGGAAGCTGGAGAAACAGAATACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCGATCATAATCAGAATGTTCTGGAAGCTGGAGAAACAGAATACAG  600

seq1  GTCAGAGTTGGGTGGAGTGAGTACTTAGAACAGTTCCTATGAGGAGGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGTTGGGTGGAGTGAGTACTTAGAACAGTTCCTATGAGGAGGTGC  650

seq1  TCTTTGAGTTAAATTTTATGTGTAAGTAAGTCATTTAGTGAAATGGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTTAAATTTTATGTGTAAGTAAGTCATTTAGTGAAATGGTTTC  700

seq1  AGTGTAGCATGTTCCAAAGAGTGGGGCATCCCAAGGTATGGAGTTCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGCATGTTCCAAAGAGTGGGGCATCCCAAGGTATGGAGTTCACTC  750

seq1  TCTTGGAAGGCATGGGCTGCCAATGATAGATAGCCTGTTGCTTATACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAAGGCATGGGCTGCCAATGATAGATAGCCTGTTGCTTATACTGT  800

seq1  GAGTAGCAGAGAG-AAGCCCAGAGAGCTAGAAGTCTAATCAGGGCACTAA  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCAGAGAGAAAGCCCAGAGAGCTAGAAGTCTAATCAGGGCACTAA  850

seq1  CTGCAACTTGTACAGTGAGGTTAGGGCCATTGGACCTGTACTGTGTCTCA  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGCAACTTGTACAGTGAAGTTAGGGCCATTGGACCTGTACTGTGTCTCA  900

seq1  TCCTCAGTTTTACAG-AAAAGAGTTTCAAATTTTACTCATTTCAGAACAC  948
      ||||||| ||||||| |||||||||||||  ||||||||||||||| |||
seq2  TCCTCAG-TTTACAGAAAAAGAGTTTCAA--TTTACTCATTTCAGACCAC  947

seq1  TGTTCCTCTTCCTGGAGACTATAATGTTTTTACGCTGTACAAACACTAAG  998
      |||||||||||||||| ||||| |||||||||||||||||||   |||||
seq2  TGTTCCTCTTCCTGGAAACTAT-ATGTTTTTACGCTGTACAACACCTAAG  996

seq1  TATCAAACCTCTACCCAGCAGTCTGTCTCTGAACAAATCATGAGGTTCTT  1048
      ||||||| |||||||||||||| |||||||| ||||||||||||| ||||
seq2  TATCAAA-CTCTACCCAGCAGT-TGTCTCTG-ACAAATCATGAGG-TCTT  1042

seq1  TCCTGTCTAAGAAAGTTTTGTCAGTGAAAACATTGTAGTGGCCAATAAAA  1098
      | |||||  ||||    ||||||||| |||||||| ||||||  ||||  
seq2  T-CTGTC-CAGAA---GTTGTCAGTG-AAACATTG-AGTGGC--ATAA--  1081

seq1  TTAAAGCACTT  1109
         ||||||||
seq2  -GTAAGCACTT  1091


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