BAC Information

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BAC

Clone NameB6Ng01-014J23
Chromosome4 (Build37)
Map Location 77,447,124 - 77,447,561
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667862
Downstream geneLOC100039974, LOC100039996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014J23.bB6Ng01-014J23.g
ACCDH849113DH849114
length1,017972
definitionDH849113|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J23, 5' end.DH849114|Mus musculus domesticus DNA, BAC clone: B6Ng01-014J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagcctgagcaattcgacaacaggagatcaaggggatacaaat
tggaaaggaagaagtcaaaatatcattctttacagatgatatgatagttt
atgtatgtgaccctaaaatttccacaagagaacttctaaacctgataaac
agattcagaggagtagcttgatataaaattaattcaaacaaatcaatgac
atttctctaaacaaaggagaaatagactgagaaaaaaatagagaaacaac
acccttcacaatagtcacaaataatataaaatactttggtgtgactctaa
ctaagaaagtgaaagatctgtatgataacaagttcaaatttctgaaaaaa
aaattgaagaggatctcataagatggaaagatcttctgtgctcatggatt
ggcaggattaatatagtcaaaatggctatcctgccaaaagtaatctacac
atttaatgcactccccatcaaaattgcagctcaattcttaactaagttag
aaagggcaatttgaaaattcatctggaataatacaaaacctaggatagca
aaaaaccagcctgaacaataaaataacctgtgatgtatcccgtcccacgg
gtttcagttattcgtgggtgcgagggagaccgaaaacctggaaggagatt
ggaggaagaaaaagaagagtaggagaccaggaaaggatacctatcagggt
ctcgtttattagtatgaggtgcctgctttttaagcatacattgaggggac
tatgggaggggccgagggagaattatacaaagaacaaagaagtggtcatc
tgctgacatgggggccaaaatcagtgccaggcagtgggcactctgcatct
tatctctggagcatcgatcctccttgacagccttggctgtcagctgggct
caagcgtaactcatgtacttcgatggcattggaactcaggaagaagatag
ggaaaagggactttcattcagcttttacagcctcagtggccaagaaagga
atagggagaaagggggg
gaattcctgatctttctaagacttttatcatgaataggtgttggattttg
ccaaatgctttctctgtgtctaacgagaagatcatgtggtttttgtcttt
gagtttgtttatataatagtttattttgatggaatttcgtatattaaacc
atccctgcacccctggaataaaatctacttagtcaggatgtatgattttt
tttttatgtgttcttggatttggttagcgagaattttattgaggattttt
tgcattgaaattcataagggaaattggtctggagttctctatctttgttg
gatctttctgtagtttaggtatcagagtaattgtggcttcatagaatgaa
atgggtagagtaccttctgcttctttttttgtggaatagtttgtgtagaa
ctggaattagatcttctttgaaggtctgatagaactctgcactaaaccca
tctcgtcatgggttttttttgggttggtagacgattaatggctgcttcta
tttctttaggggatatgtgactgtttagatcattaaattgattctgattt
aactctagtacctggtatctgtctagaaatttgtccattttcatcgtggg
tgttccagtttttcttgagtataacctttcatagaaggatctgagggtgt
tttgggatttcttcaggatctgttgttatgtctcccttttcatttctgat
tttattaattaggatgttgttcctgtgtcctctagtgagtctggctaagg
tttatctatcttgttgattttctcaaagaactagctccccgttggttgtt
atttgaatagttctcttgtttctagttggttgatttcgccctgagtttga
ttatttctgctgtctcctcctctgggtgaatttccttgcttttattctag
agctttaggggtgtggtcaagtcccagtgtgggctctctctgaatctttt
tggaggcctccagggctatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77447124_77447561
seq2: B6Ng01-014J23.b_627_1058

seq1  TATCCCGTCCCGCGGGATTCAGTTATTCGTGGGTGCGAGGGGGACCGCAA  50
      ||||||||||| |||| |||||||||||||||||||||||| ||||| ||
seq2  TATCCCGTCCCACGGGTTTCAGTTATTCGTGGGTGCGAGGGAGACCGAAA  50

seq1  ACCTGGAAGGAAATGGGAGTAAAAGAAAGAAGAGTCGGAGGACCAAGTA-  99
      ||||||||||| || |||| || | |||||||||| ||| ||||| | | 
seq2  ACCTGGAAGGAGATTGGAGGAAGAAAAAGAAGAGTAGGA-GACCAGGAAA  99

seq1  -GATTGAACCTATCAAGGTCTCGTTTATTAGGCTGAGGTGCCTTCTTTTT  148
       |||   |||||||| |||||||||||||||  |||||||||| ||||||
seq2  GGAT---ACCTATCAGGGTCTCGTTTATTAGTATGAGGTGCCTGCTTTTT  146

seq1  AAAGCATACATTGCGGGGAATATGGGAGGGGTCGAGGGAGAATTATACAA  198
       |||||||||||| ||||| ||||||||||| ||||||||||||||||||
seq2  -AAGCATACATTGAGGGGACTATGGGAGGGGCCGAGGGAGAATTATACAA  195

seq1  AGAACAAAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAGGCGCCA  248
      ||||||||||||||| |||||||||||||||||||| || ||| | ||||
seq2  AGAACAAAGAAGTGGTCATCTGCTGACATGGGGGCCAAAATCA-GTGCCA  244

seq1  GGCAGTGGGCACTCTGGATCTTATCTCTGGAACATCGATCCTCCTTGACA  298
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  GGCAGTGGGCACTCTGCATCTTATCTCTGGAGCATCGATCCTCCTTGACA  294

seq1  GCCTTGGGGGTCAGGCTGTGCTCAGGCGTAACTCATGTCCTTGGATGGCA  348
      |||||||  |||| |||| ||||| ||||||||||||| ||| |||||||
seq2  GCCTTGGCTGTCA-GCTGGGCTCAAGCGTAACTCATGTACTTCGATGGCA  343

seq1  TGGGAACTCAGGAAG-AGATAGGGAAGAGGGGACTATAATTCAGCTTTTA  397
      | ||||||||||||| |||||||||| | |||||| | ||||||||||||
seq2  TTGGAACTCAGGAAGAAGATAGGGAA-AAGGGACTTTCATTCAGCTTTTA  392

seq1  CAGCCTCAGGTGCCAGGAAAGGAATAGGGAGGAAAGGGGGG  438
      |||||||||  |||| |||||||||||||| ||||||||||
seq2  CAGCCTCAGTGGCCAAGAAAGGAATAGGGA-GAAAGGGGGG  432