BAC Information

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BAC

Clone NameB6Ng01-014N21
Chromosome4 (Build37)
Map Location 110,703,016 - 110,704,067
singlet/doubletsinglet
Overlap genenone
Upstream geneElavl4
Downstream geneLOC100040381, 2310026E23Rik, Spata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N21.bB6Ng01-014N21.g
ACCDH849288DH849289
length1,1831,028
definitionDH849288|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N21, 5' end.DH849289|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgggctccaacagcagcagactggaagccattactctacttta
tgagtatcattatttgtggcagtcagaatacttctttccctgacatctct
gtaacagcctttcttctcaaacacatcttataatacctactcatggactc
cactccccggaaaacaccaaagtaataaagcaaaggtatattgtctccca
ggaactgccattccacatgtaaaataatgcactcaggaatacacacaatc
ctaagacatctggtggcagtgtttgatacagataatagctatggtttctt
gtgtgcttgtctgatgtaccctagagaatatatttacttaggttagagaa
aaatttattttagcatatacagcctagatgtgttagtctatgtgttaagg
gtctgacatcaaaaagtgcatatgaataataaatctgctaagggaaatca
tgtgaaagaaaagggggaaggacctgtggtaagctgggactgctgtgtga
actacatgaaggataaagggaaagatagaaggcagcttaggtagaaacag
tgcagttctgaggacaattatatgagagagtccttgagccatttatatgc
ctaaggagacctttattagcttgggacaagagagccttaatagccaaact
gagctgagtatgttctgagaaatgtcagtggtaagtgaggcctcaatgtg
aacaatatatgtcaacacaaagttgaaaccctgagtgtactggatggttt
tgtgtgtcaacttgacacaaactgaagttattacagagaaagaagcctcc
cttgaggaaatgcctacatgagattcaactctaaggcattttctgatgga
agggtcctgcctattgtgggtggtgccatcactgggctgttagtcttgga
ttctatgagagagcagctgagtgagcagggattcaggcagtagtacatct
tctatgctcctgcatcagctcgcttctgtgctgggtgagagttccgcttg
aattctttggtggatgaataaaccctttctctctgactgcttcttgtcat
ggatgatttgtgcgggaaatcaaactctgaccaaggcaattggtacagga
agtccgaattcttggtacaacagtgtactggtggagtgactggaccctga
atgtaggacctctatcattgagtgtgtatagac
gaattctctgaagtgaaacaacaacaagaagaacagatgtctagtagaac
acagaaaggatcagatatgatcaatttgatatttaaattgttgtacagat
gaagggagccttggaggggggctataacaagccatttgactagaacatct
gtgaagatagagcagaggccatatactctgtcatacatgcaaatctaatg
ctgacccctgctgtctgttctatggtttgttgccctagaatactgcttgt
ttatgtgaggcgaatactctgttgtgataccagctttcaaagttttagca
tgaggcaatccaggacagaaaagaggaattaatataggcattttaaataa
ataaacaaaggcatgctatctttctggccatagctttgcaggtatcatct
atcttctctcagtccttctaatttcttattggtagaaacttgacctatag
aaattccttccatattttgcattgtgccacataatccttagtgtctgatg
aagaaatattcaacaacatcattgtcactggcagcagcaaagtgagtcac
agggtaaagaacgaatcaccaaagaggtaggtgttatgcagtatttcatg
gtggcccaccatgtagcctggtgtttcattggaagcaccaatggaagctg
aaccattataagtgtgtgggcaacaagatattgccatacttcttttacaa
caactgggaagttgagaagtgggtcttttctacaacataaaactctaaat
gtgcaaccacattataggcactggccacatagaaaggacaatgccacatg
gcctctaccatgaaagcacaataagcccaatgaagacaatcatcatcttc
ctgctcaactttcaggatgttgttggtgctcaatgaccttcctatttggg
ccattgtatcatcaaaagttttcttttgtatgtgtgagaaaatctagaga
agagaaataagatatatctcagactatttctgacatattttttaaattat
ttttcctatcactaacgtccactcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110703016_110704067
seq2: B6Ng01-014N21.g_67_1094

seq1  GAATTCTCTGAAGTGAAACAACAACAAGAAGAACAGATGTCTAGTAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAAGTGAAACAACAACAAGAAGAACAGATGTCTAGTAGAAC  50

seq1  ACAGAAAGGATCAGATATGATCAATTTGATATTTAAATTGTTGTACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGGATCAGATATGATCAATTTGATATTTAAATTGTTGTACAGAT  100

seq1  GAAGGGAGCCTTGGAGGGGGGCTATAACAAGCCATTTGACTAGAACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGCCTTGGAGGGGGGCTATAACAAGCCATTTGACTAGAACATCT  150

seq1  GTGAAGATAGAGCAGAGGCCATATACTCTGTCATACATGCAAATCTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATAGAGCAGAGGCCATATACTCTGTCATACATGCAAATCTAATG  200

seq1  CTGACCCCTGCTGTCTGTTCTATGGTTTGTTGCCCTAGAATACTGCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCCTGCTGTCTGTTCTATGGTTTGTTGCCCTAGAATACTGCTTGT  250

seq1  TTATGTGAGGCGAATACTCTGTTGTGATACCAGCTTTCAAAGTTTTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGAGGCGAATACTCTGTTGTGATACCAGCTTTCAAAGTTTTAGCA  300

seq1  TGAGGCAATCCAGGACAGAAAAGAGGAATTAATATAGGCATTTTAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAATCCAGGACAGAAAAGAGGAATTAATATAGGCATTTTAAATAA  350

seq1  ATAAACAAAGGCATGCTATCTTTCTGGCCATAGCTTTGCAGGTATCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAAGGCATGCTATCTTTCTGGCCATAGCTTTGCAGGTATCATCT  400

seq1  ATCTTCTCTCAGTCCTTCTAATTTCTTATTGGTAGAAACTTGACCTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCTCAGTCCTTCTAATTTCTTATTGGTAGAAACTTGACCTATAG  450

seq1  AAATTCCTTCCATATTTTGCATTGTGCCACATAATCCTTAGTGTCTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTTCCATATTTTGCATTGTGCCACATAATCCTTAGTGTCTGATG  500

seq1  AAGAAATATTCAACAACATCATTGTCACTGGCAGCAGCAAAGTGAGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATTCAACAACATCATTGTCACTGGCAGCAGCAAAGTGAGTCAC  550

seq1  AGGGTAAAGAACGAATCACCAAAGAGGTAGGTGTTATGCAGTATTTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAAAGAACGAATCACCAAAGAGGTAGGTGTTATGCAGTATTTCATG  600

seq1  GTGGCCCACCATGTAGCCTGGTGTTTCATTGGAAGCACCAATGGAAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCACCATGTAGCCTGGTGTTTCATTGGAAGCACCAATGGAAGCTG  650

seq1  AACCATTATAAGTGTGTGGGCAACAAGATATTGCCATACTTCTTTTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTATAAGTGTGTGGGCAACAAGATATTGCCATACTTCTTTTACAA  700

seq1  CAACTGGGAAGTTGAGAAGTGGGTCTTTTCTACAACATAAAACTCTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGGAAGTTGAGAAGTGGGTCTTTTCTACAACATAAAACTCTAAAT  750

seq1  GTGCAACCACATTATAGGCACTGGCCACATAG-AAGGACAATGCCACATG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTGCAACCACATTATAGGCACTGGCCACATAGAAAGGACAATGCCACATG  800

seq1  GCCTCTACCATGAAAGCACAATAAGCCCAATGAAGACAATCATCATCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTACCATGAAAGCACAATAAGCCCAATGAAGACAATCATCATCTTC  850

seq1  CTGCTCAACTTTCAAGGATGTTGTTGGTGCTCAATGACCTTCCTATTTGG  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAACTTTC-AGGATGTTGTTGGTGCTCAATGACCTTCCTATTTGG  899

seq1  GCCATTGGTATCATCAAAAGTTTTCTTTTGTATGTGTGAGAAAAAATCTA  949
      |||||| |||||||||||||||||||||||||||||||||  ||||||||
seq2  GCCATT-GTATCATCAAAAGTTTTCTTTTGTATGTGTGAG--AAAATCTA  946

seq1  GAGAAGAGAAAATTAGGATTAATTATTCTCAGACTATTTTCCTGACCAAT  999
      |||||||||||  || |||  |    |||||||||||||  |||||  ||
seq2  GAGAAGAGAAA--TAAGATATA----TCTCAGACTATTT--CTGAC--AT  986

seq1  AATTTTTTTTTAATTTATTTTTTTCACTTATTCACTTTACGTCCCACTCA  1049
      |    |||||||| ||||||||    | || |||| | |||| |||||||
seq2  A----TTTTTTAAATTATTTTT----CCTA-TCAC-TAACGT-CCACTCA  1025

seq1  CTG  1052
      |||
seq2  CTG  1028