BAC Information

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BAC

Clone NameB6Ng01-015B11
Chromosome4 (Build37)
Map Location 107,914,621 - 107,915,474
singlet/doubletsinglet
Overlap geneZyg11b
Upstream geneLrrc42, 2900042B11Rik, Dio1, Yipf1, LOC652920, Tmem48, Glis1, Dmrtb1, LOC100039889, LOC433743, 4933424M12Rik, 4930430J20Rik, Magoh, 0610037L13Rik, Cpt2, Slc1a7, Podn, Scp2, Echdc2, Zyg11a
Downstream geneLOC100040252, 2010305A19Rik, LOC545667, Gpx7, LOC665728, Zcchc11, LOC100040110, Prpf38a, Orc1l, Cc2d1b, Zfyve9, LOC100040326, 3110021N24Rik, Btf3l4, Txndc12, Kti12, Rab3b, Nrd1, Osbpl9, Calr4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015B11.bB6Ng01-015B11.g
ACCDH849445DH849446
length181856
definitionDH849445|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B11, 5' end.DH849446|Mus musculus domesticus DNA, BAC clone: B6Ng01-015B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagcctggcaaggtagcatacaattttaatctcagcactctgaa
tgcaaaggcaggtggatctatgtgaatttgaggccagcctggtctataga
gcaaattcctgaacagacagagctacatagtgagactctgtcccatggtg
gggctcagggggatggtgggagggagtgatg
gaattcctctggcttcggctcaaggtccatgcttgttcacctctggatat
taaatgggcgataattccagctgcgaagtaactgacttctacttcaacac
tgtgtaggagactgctgatgtggtctataaaatccttccacattagttca
gaatgcagctcttgtacttcagctatgttgttctgggagaaaaagaaggt
ataaaagttagtcttctctgaaggaacagctggcggggctgctcgcagac
actgcaccacaagcatcttggtgctctttgacaaagcatgcaagccgggc
agtttgcaaatgaagtaagggaagtcacgggagcgtgagggacaaatgtc
tctcatagtcttgcatgcttgaacacttgatgaacaactgatgaaggtgt
cagaagtcgtagggggtgtggccttgctggagaagtttgtcactgggaga
acagtgacaaggtttcaaagctttgcaccacagtacacctgccccttcta
tgctgtgcttccaatcaaaatgggatttctcaactcctgttcctgacgcc
atcctgccactggctgccatcagagactctttttttgttgttttgttttg
gtttttggtttttcgaaacagggtttctctgtgtagccctggctatcctg
gaactcactctgtagaccaggctggccttgaactcagaaatccgcctgcc
tctgcctcccaggtgctgggattaaaggagtgcgccaccacacctggttc
atagactcttttaaaaaacgttttttttccctagttttgagatttttttt
ccttctttttttaatgtgagtgcctgaatctattctctatctatctatct
atctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_107914621_107915474
seq2: B6Ng01-015B11.g_69_924

seq1  GAATTCCTCTGGCTTCGGCTCAAGGTCCATGCTTGTTCACCTCTGGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGCTTCGGCTCAAGGTCCATGCTTGTTCACCTCTGGATAT  50

seq1  TAAATGGGCGATAATTCCAGCTGCGAAGTAACTGACTTCTACTTCAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGGCGATAATTCCAGCTGCGAAGTAACTGACTTCTACTTCAACAC  100

seq1  TGTGTAGGAGACTGCTGATGTGGTCTATAAAATCCTTCCACATTAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGAGACTGCTGATGTGGTCTATAAAATCCTTCCACATTAGTTCA  150

seq1  GAATGCAGCTCTTGTACTTCAGCTATGTTGTTCTGGGAGAAAAAGAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAGCTCTTGTACTTCAGCTATGTTGTTCTGGGAGAAAAAGAAGGT  200

seq1  ATAAAAGTTAGTCTTCTCTGAAGGAACAGCTGGCGGGGCTGCTCGCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTTAGTCTTCTCTGAAGGAACAGCTGGCGGGGCTGCTCGCAGAC  250

seq1  ACTGCACCACAAGCATCTTGGTGCTCTTTGACAAAGCATGCAAGCCGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACCACAAGCATCTTGGTGCTCTTTGACAAAGCATGCAAGCCGGGC  300

seq1  AGTTTGCAAATGAAGTAAGGGAAGTCACGGGAGCGTGAGGGACAAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCAAATGAAGTAAGGGAAGTCACGGGAGCGTGAGGGACAAATGTC  350

seq1  TCTCATAGTCTTGCATGCTTGAACACTTGATGAACAACTGATGAAGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGTCTTGCATGCTTGAACACTTGATGAACAACTGATGAAGGTGT  400

seq1  CAGAAGTCGTAGGGGGTGTGGCCTTGCTGGAGAAGTTTGTCACTGGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCGTAGGGGGTGTGGCCTTGCTGGAGAAGTTTGTCACTGGGAGA  450

seq1  ACAGTGACAAGGTTTCAAAGCTTTGCACCACAGTACACCTGCCCCTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACAAGGTTTCAAAGCTTTGCACCACAGTACACCTGCCCCTTCTA  500

seq1  TGCTGTGCTTCCAATCAAAATGGGATTTCTCAACTCCTGTTCCTGACGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCTTCCAATCAAAATGGGATTTCTCAACTCCTGTTCCTGACGCC  550

seq1  ATCCTGCCACTGGCTGCCATCAGAGACTCTTTTTTTGTTGTTTTGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCACTGGCTGCCATCAGAGACTCTTTTTTTGTTGTTTTGTTTTG  600

seq1  GTTTTTGGTTTTTCGAAACAGGGTTTCTCTGTGTAGCCCTGGCTATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTTTTTCGAAACAGGGTTTCTCTGTGTAGCCCTGGCTATCCTG  650

seq1  GAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  700

seq1  TCTGCCTCCCAGGTGCTGGGATTAAAGGAGTGCGCCACCACACCTGGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAGGTGCTGGGATTAAAGGAGTGCGCCACCACACCTGGTTC  750

seq1  ATAGACTCTTTTAAAAAACGTTTTTTTTCCCTAGTTTTGAGA-TTTTTTT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAGACTCTTTTAAAAAACGTTTTTTTTCCCTAGTTTTGAGATTTTTTTT  800

seq1  CCTTCTTTTTTTAATGTGAGTGCCTGAATCTA-TCTCTATCTATCTATCT  848
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTTCTTTTTTTAATGTGAGTGCCTGAATCTATTCTCTATCTATCTATCT  850

seq1  ATCTAT  854
      ||||||
seq2  ATCTAT  856