BAC Information

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BAC

Clone NameB6Ng01-015C07
Chromosome4 (Build37)
Map Location 56,707,403 - 56,808,727
singlet/doubletdoublet
Overlap geneActl7b, Actl7a, Ikbkap
Upstream genenone
Downstream geneBC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015C07.bB6Ng01-015C07.g
ACCDH849484DH849485
length1,070783
definitionDH849484|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C07, 5' end.DH849485|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,807,659 - 56,808,727)(56,707,403 - 56,708,188)
sequence
gaattcagtttatagctatagaaatgtcttagaaaactagcaatctttaa
agcagtagaggagggccctggggacttttatgttgaatttatacagtcag
tagctaaggagaagcatctggaggctggcctgctcagagcttgtgtttca
gggcattatgtgtgcatgcatctgtctacctcttccacctgggcctcctc
attctggctcagtagcttctggtgccccagacacttggaaatgactgatt
tgttacatgaactcctaagctcaacagaccctgattatgatgacaaaaga
ctttgaagtgatcgcagaggagcagatccaccaggatgattttggagaag
gtaagcgtttcttggaaacattctgtgacctgttttacccattttcttac
tcataacattcgttgtcataagccgaaagttcatctcagttctttacaga
catgtcactaacctcccttcagatctgacaggtagctttctcgatattct
ggtgaatggaaatctatccatgaggtctcctggatatcacttaaacctga
ggaaagatttacactagaattacagggaaagaattattgaggttagaata
aggggagcatgtttagagtacagtgtattagtgggccacaagaaaggagt
aggggcagttagaaggcagtgttcttttccttccagctagactagatcag
ctttagatcagctagagttttgcttttcttttttttttttaccttgcagt
aaattagaggaaagatagttgaagtttgtgctttaagtttctttgtgagg
gcagacataggctccagtctgcagatccctgctgtgagcccatcactcac
tatcggtctgattggaagacttttcttatttaactctggtcctctacctc
ttggggacctgtcggagaagctcaggctgagcacagcagtagccaccacc
tcttcatgttgtggtgcagagtgtccttggaggtgtatcatcacaccttg
ggacatgcatcatgcaagcagactagaaatgggctgtgttgaggcatatt
tattgattgtaaggtagtct
gaattcttctggtagtcacttctagaaggaatttttcacttagcagttaa
tgtgcaagacattgaaaaatatcgcccatagcatcctccattttgactta
ttaaaagaatacaggtttccttccatggctatttctcacactgctcacaa
attaaaatcaagacaatatgcagccttgtggtacacattgaccaatgaaa
tttcccttcatgctatgctgtgtgggggagcacaggctagcttcctggga
tatggaagaccgcacaaagtaaacagttgcctatctgatgccccacagat
cagccaacatggcaagcaccagatctgtgagggtggccaccatagatcag
tcaggctacccagctgcctgcacaactgccagtcaaccacgcactcatga
acaataatcgtcaatcattacttttcacgacattaaatttttgacttaac
ttatgcaccaaatctaactgaaacagaaaccatgtgagagcaaacagaag
tgaggaagagactggccacagaaatgctaacatgagaaagatttgaagtt
gcatctttttctcaattacctaagcttctggcttctgtagcaagaatcca
atatggctcctcatgatgcccacttccattattcacacactcaattcctt
ctccttgggtgtcagctagacttagttttttgcttctaatgaatagtatt
tggcaaagctaaggaagtctggtaatggtgaggttacctttttctgggac
ttttatctggtgggtttctctcctctctcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56807659_56808727
seq2: B6Ng01-015C07.b_49_1118 (reverse)

seq1  AGACTACC-TACAATTCAATAAATTATGGCTCAACACAG-CCATTTCTAG  48
      |||||||| ||||| |||||||| |||| |||||||||| ||||||||||
seq2  AGACTACCTTACAA-TCAATAAA-TATGCCTCAACACAGCCCATTTCTAG  48

seq1  TCTGCTTGCATGATGCATGTCC--AAGTGTGATGATACACCCTCCAAGGA  96
      ||||||||||||||||||||||  | ||||||||||||| ||||||||||
seq2  TCTGCTTGCATGATGCATGTCCCAAGGTGTGATGATACA-CCTCCAAGGA  97

seq1  CACTCTGCCACCAC-ACATGAAGA-GTGGTGGCTACTGCTGTGCTCAGCC  144
      ||||||| |||||| ||||||||| |||||||||||||||||||||||||
seq2  CACTCTG-CACCACAACATGAAGAGGTGGTGGCTACTGCTGTGCTCAGCC  146

seq1  TGGAGCTTCTCCGACAGGTCCCCAAGAGGTAGAGGACCAGAGTTAAATAA  194
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GAGCTTCTCCGACAGGTCCCCAAGAGGTAGAGGACCAGAGTTAAATAA  195

seq1  GAAAAGTCTTCCAATCAGACCGATAGTGAGTGATGGGCTCACAGCAGGGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCTTCCAATCAGACCGATAGTGAGTGATGGGCTCACAGCAGGGA  245

seq1  TCTGCAGACTGGAGCCTATGTCTGCCCTCACAAAGAAACTTAAAGCACAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGACTGGAGCCTATGTCTGCCCTCACAAAGAAACTTAAAGCACAA  295

seq1  ACTTCAACTATCTTTCCTCTAATTTACTGCAAGGTTAAAAAAAAAAAGAA  344
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTTCAACTATCTTTCCTCTAATTTACTGCAAGGTAAAAAAAAAAAAGAA  345

seq1  AAGCAAAACTCTAGCTGATCTAAAGCTGATCTAGTCTAGCTGGAAGGAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACTCTAGCTGATCTAAAGCTGATCTAGTCTAGCTGGAAGGAAA  395

seq1  AGAACACTGCCTTCTAACTGCCCCTACTCCTTTCTTGTGGCCCACTAATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTGCCTTCTAACTGCCCCTACTCCTTTCTTGTGGCCCACTAATA  445

seq1  CACTGTACTCTAAACATGCTCCCCTTATTCTAACCTCAATAATTCTTTCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTACTCTAAACATGCTCCCCTTATTCTAACCTCAATAATTCTTTCC  495

seq1  CTGTAATTCTAGTGTAAATCTTTCCTCAGGTTTAAGTGATATCCAGGAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTCTAGTGTAAATCTTTCCTCAGGTTTAAGTGATATCCAGGAGA  545

seq1  CCTCATGGATAGATTTCCATTCACCAGAATATCGAGAAAGCTACCTGTCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGGATAGATTTCCATTCACCAGAATATCGAGAAAGCTACCTGTCA  595

seq1  GATCTGAAGGGAGGTTAGTGACATGTCTGTAAAGAACTGAGATGAACTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAAGGGAGGTTAGTGACATGTCTGTAAAGAACTGAGATGAACTTT  645

seq1  CGGCTTATGACAACGAATGTTATGAGTAAGAAAATGGGTAAAACAGGTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTATGACAACGAATGTTATGAGTAAGAAAATGGGTAAAACAGGTCA  695

seq1  CAGAATGTTTCCAAGAAACGCTTACCTTCTCCAAAATCATCCTGGTGGAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTTTCCAAGAAACGCTTACCTTCTCCAAAATCATCCTGGTGGAT  745

seq1  CTGCTCCTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCT  795

seq1  GTTGAGCTTAGGAGTTCATGTAACAAATCAGTCATTTCCAAGTGTCTGGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTTAGGAGTTCATGTAACAAATCAGTCATTTCCAAGTGTCTGGG  845

seq1  GCACCAGAAGCTACTGAGCCAGAATGAGGAGGCCCAGGTGGAAGAGGTAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGAAGCTACTGAGCCAGAATGAGGAGGCCCAGGTGGAAGAGGTAG  895

seq1  ACAGATGCATGCACACATAATGCCCTGAAACACAAGCTCTGAGCAGGCCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCATGCACACATAATGCCCTGAAACACAAGCTCTGAGCAGGCCA  945

seq1  GCCTCCAGATGCTTCTCCTTAGCTACTGACTGTATAAATTCAACATAAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGATGCTTCTCCTTAGCTACTGACTGTATAAATTCAACATAAAA  995

seq1  GTCCCCAGGGCCCTCCTCTACTGCTTTAAAGATTGCTAGTTTTCTAAGAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGGGCCCTCCTCTACTGCTTTAAAGATTGCTAGTTTTCTAAGAC  1045

seq1  ATTTCTATAGCTATAAACTGAATTC  1069
      |||||||||||||||||||||||||
seq2  ATTTCTATAGCTATAAACTGAATTC  1070

seq1: chr4_56707403_56708188
seq2: B6Ng01-015C07.g_71_853

seq1  GAATTCTTCTGGTAGTCACTTCTAGAAGGAATTTTTCACTTAGCAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGTAGTCACTTCTAGAAGGAATTTTTCACTTAGCAGTTAA  50

seq1  TGTGCAAGACATTGAAAAATATCGCCCATAGCATCCTCCATTTTGACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAGACATTGAAAAATATCGCCCATAGCATCCTCCATTTTGACTTA  100

seq1  TTAAAAGAATACAGGTTTCCTTCCATGGCTATTTCTCACACTGCTCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAATACAGGTTTCCTTCCATGGCTATTTCTCACACTGCTCACAA  150

seq1  ATTAAAATCAAGACAATATGCAGCCTTGTGGTACACATTGACCAATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATCAAGACAATATGCAGCCTTGTGGTACACATTGACCAATGAAA  200

seq1  TTTCCCTTCATGCTATGCTGTGTGGGGGAGCACAGGCTAGCTTCCTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCATGCTATGCTGTGTGGGGGAGCACAGGCTAGCTTCCTGGGA  250

seq1  TATGGAAGACCGCACAAAGTAAACAGTTGCCTATCTGATGCCCCACAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGACCGCACAAAGTAAACAGTTGCCTATCTGATGCCCCACAGAT  300

seq1  CAGCCAACATGGCAAGCACCAGATCTGTGAGGGTGGCCACCATAGATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAACATGGCAAGCACCAGATCTGTGAGGGTGGCCACCATAGATCAG  350

seq1  TCAGGCTACCCAGCTGCCTGCACAACTGCCAGTCAACCACGCACTCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTACCCAGCTGCCTGCACAACTGCCAGTCAACCACGCACTCATGA  400

seq1  ACAATAATCGTCAATCATTACTTTTCACGACATTAAATTTTTGACTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATCGTCAATCATTACTTTTCACGACATTAAATTTTTGACTTAAC  450

seq1  TTATGCACCAAATCTAACTGAAACAGAAACCATGTGAGAGCAAACAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCACCAAATCTAACTGAAACAGAAACCATGTGAGAGCAAACAGAAG  500

seq1  TGAGGAAGAGACTGGCCACAGAAATGCTAACATGAGAAAGATTTGAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGAGACTGGCCACAGAAATGCTAACATGAGAAAGATTTGAAGTT  550

seq1  GCATCTTTTTCTCAATTACCTAAGCTTCTGGCTTCTGTAGCAAGAATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTTTCTCAATTACCTAAGCTTCTGGCTTCTGTAGCAAGAATCCA  600

seq1  ATATGGCTCCTCATGATGCCCACTTCCATTATTCACAACACTCACATCCT  650
      |||||||||||||||||||||||||||||||||||| |||||||  ||||
seq2  ATATGGCTCCTCATGATGCCCACTTCCATTATTCAC-ACACTCAATTCCT  649

seq1  TCTCCTTGGGTGTCAGCTAGACTTAGTATTTTGCTTCTAATGAATAGTAT  700
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTCCTTGGGTGTCAGCTAGACTTAGTTTTTTGCTTCTAATGAATAGTAT  699

seq1  TTGGCAAAGCTAAGGAAGTCTGGTCAATGGTGAGGTTACCATTTACTGGG  750
      |||||||||||||||||||||||| ||||||||||||||| ||| |||||
seq2  TTGGCAAAGCTAAGGAAGTCTGGT-AATGGTGAGGTTACCTTTTTCTGGG  748

seq1  ACTTCTATCTTGTGGGTTCTCTCCCCCTCTC-CCCCT  786
      |||| ||||| ||||||| ||| | |||||| |||||
seq2  ACTTTTATCTGGTGGGTT-TCT-CTCCTCTCTCCCCT  783