BAC Information

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BAC

Clone NameB6Ng01-015G03
Chromosome4 (Build37)12 (Build37)
Map Location 38,988,021 - 38,988,96175,224,376 - 75,224,719
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039448, LOC665520, LOC100039487
Downstream gene1700009N14Rik, LOC435775, LOC329824, LOC621880
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G03.bB6Ng01-015G03.g
ACCDH849654DH849655
length973344
definitionDH849654|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G03, 5' end.DH849655|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(38,988,021 - 38,988,961)(75,224,376 - 75,224,719)
sequence
gaattcagaactcttcagctgaggaacggcggtaccggtaagtagaaaga
aattaatgtgagtctctgagaagcatgctctcctaagaaataggatctcg
gtaaagagaaaaataggatctccggctctggagacaagaaagtgaaagta
agagagaaagtgaaagtaagaggataatagggacagtctatgggttactt
tttttttctagccattggagtaatttttctgagtcttttttgttgttgtg
gcgactgtgtggaacatgaaagactaggtatggggtcgtcacagtcacac
ccaattttttcagcgctcgatgagctgctaagagtgaagggcgcaaaact
atatcttttgggtcatattcaaccttctgtatctccatggaatacccaaa
attttgttatcagaaagaaattgggcaaatggaggttgttacaggatctg
caagctattaatgcacagatgcaggtgatgggctccattcagaggggtct
gtctctcttatctgctctgccagaaaagtggcctctaaaagattgtttct
tttccattccattaaataagaaagataaacctagatttgcattcaccttg
ccttctattaatcatatggagcctgataaaaggtaccaatggcgggtatt
acctcaaggaatggcaaatagccctaccatatgtcagttatatgtaggaa
aagccttgcaaccagttagggatggtttcccctccttaaaaatttgtcat
tatatggatgatattgtgatttgtggacctgaagaagaaagtatacagca
agcttatggcttgcttaatgaaactttaaaaataatggcttgattattgc
accagaaaaagtacagcagtctgacgttagtcatttttaggagccactat
tactttacgatgtgtcaccccacaaagattagtattagaaaagatcatct
aaagacactaaatgattttcaaa
caggttggcaagtgtggttgaaagggaatggcccccataggtgcatacat
tttaatgttcagtcatcagggagtggcattatttgaaaagaatttggaag
catgaacttggagtgtttggaggtggtgttgaggtttcaaaagtgaaaac
aaggcccagagtctctctgcctatggattaggatatagctctcagctccc
caacaaaatgatttctttcataagagttgccatggctatggtgtttcttc
acaggtataaaacagtgaataagacagcaagggagaaaatatgaatgacc
agaaaccaggataggatgggggaagaattgggtatgtagagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38988021_38988961
seq2: B6Ng01-015G03.b_49_900

seq1  ATTCAGAACTCTTCAGCTGGGGACCGGTGGTAATAAAGGTTCCTGTAAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGCTGCTGAGGATTCAACAGCGTGAATTCAGAACTCTTCAGCTGAGGA  100
                                 |||||||||||||||||||||||
seq2  ---------------------------ATTCAGAACTCTTCAGCTGAGGA  23

seq1  ACGGCGGTACCGGTAAGTAGAAAGAAATTAATGTGAGTCTCTGAGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCGGTACCGGTAAGTAGAAAGAAATTAATGTGAGTCTCTGAGAAGCA  73

seq1  TGCTCTCCTAAGAAATAGGATCTCGGTAAAGAGAAAAATAGGATCTCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCCTAAGAAATAGGATCTCGGTAAAGAGAAAAATAGGATCTCCGG  123

seq1  CTCTGGAGACAAGAAAGTGAAAGTAAGAGAGAAAGTGAAAGTAAGAGGAA  250
      ||||||||||||||||||||||||||||||                 |||
seq2  CTCTGGAGACAAGAAAGTGAAAGTAAGAGA-----------------GAA  156

seq1  AGTGAAAGTAAGAGGATAATAGGGACAGTCTATGGGTTACTTTCTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGTGAAAGTAAGAGGATAATAGGGACAGTCTATGGGTTACTTTTTTTTTC  206

seq1  TAGCCATTGGAGTAATTTTTCTGAGTCTTTTTTGTTGTTGTGGCGACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTGGAGTAATTTTTCTGAGTCTTTTTTGTTGTTGTGGCGACTGT  256

seq1  GTGGAACATGAAAGACTAGGTATGGGGTC------GTCACACCCAATTTT  394
      |||||||||||||||||||||||||||||      |||||||||||||||
seq2  GTGGAACATGAAAGACTAGGTATGGGGTCGTCACAGTCACACCCAATTTT  306

seq1  TTCAGTGCTCGATGAGCTGCTAAGACTGAAGGGCGCAAAACTATATCTTT  444
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCAGCGCTCGATGAGCTGCTAAGAGTGAAGGGCGCAAAACTATATCTTT  356

seq1  TGGGTCATATTCAACCTTCTGTATCTCCATGGAATACCCAAAATTTTGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCATATTCAACCTTCTGTATCTCCATGGAATACCCAAAATTTTGTT  406

seq1  ATCAGAAAGAAATCGGGCAAATGGAGGTTGTTACAGGATCTGCAAGCTAC  544
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  ATCAGAAAGAAATTGGGCAAATGGAGGTTGTTACAGGATCTGCAAGCTAT  456

seq1  TAATGCACAGATGCAGGTGATGGGCTCCATTCAGAGGGGTCTGTCTCTCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCACAGATGCAGGTGATGGGCTCCATTCAGAGGGGTCTGTCTCTCT  506

seq1  TATCTGCTCTGCCAGAAAAGTGGCCTCTAAAAGATTGTTTCTTTTCCATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCTCTGCCAGAAAAGTGGCCTCTAAAAGATTGTTTCTTTTCCATT  556

seq1  CCATTAAATAAGAAAGATAAACCTAGATTTGCATTCACCTTGCCTTCTAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAATAAGAAAGATAAACCTAGATTTGCATTCACCTTGCCTTCTAT  606

seq1  TAATCATATGGAGCCTGATAAAAGGTACCAATGGCGGGTATTACCTCAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATATGGAGCCTGATAAAAGGTACCAATGGCGGGTATTACCTCAAG  656

seq1  GAATGGTAAATAGCCTTACCATATGTCAGTTATATGTAGGAAAAGCCTTG  794
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  GAATGGCAAATAGCCCTACCATATGTCAGTTATATGTAGGAAAAGCCTTG  706

seq1  CAACCAGTTAGGGATGGTTTTCCCTCCTTAAAAATTTGTCATTATATGGA  844
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAACCAGTTAGGGATGGTTTCCCCTCCTTAAAAATTTGTCATTATATGGA  756

seq1  CGATATTGTGATTTGTGGACCTGAAGAAGAAAGTATACAGCAAGCTTATG  894
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGTGATTTGTGGACCTGAAGAAGAAAGTATACAGCAAGCTTATG  806

seq1  GCTTGCTTAATGAAACTTTAAAAAATAATGGCTTGATTATTGCACCA  941
      ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTTGCTTAATGAAACTTT-AAAAATAATGGCTTGATTATTGCACCA  852

seq1: chr12_75224376_75224719
seq2: B6Ng01-015G03.g_73_416

seq1  CAGGTTGGCAAGTGTGGTTGAAAGGGAATGGCCCCCATAGGTGCATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGGCAAGTGTGGTTGAAAGGGAATGGCCCCCATAGGTGCATACAT  50

seq1  TTTAATGTTCAGTCATCAGGGAGTGGCATTATTTGAAAAGAATTTGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTCAGTCATCAGGGAGTGGCATTATTTGAAAAGAATTTGGAAG  100

seq1  CATGAACTTGGAGTGTTTGGAGGTGGTGTTGAGGTTTCAAAAGTGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTTGGAGTGTTTGGAGGTGGTGTTGAGGTTTCAAAAGTGAAAAC  150

seq1  AAGGCCCAGAGTCTCTCTGCCTATGGATTAGGATATAGCTCTCAGCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCAGAGTCTCTCTGCCTATGGATTAGGATATAGCTCTCAGCTCCC  200

seq1  CAACAAAATGATTTCTTTCATAAGAGTTGCCATGGCTATGGTGTTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATGATTTCTTTCATAAGAGTTGCCATGGCTATGGTGTTTCTTC  250

seq1  ACAGGTATAAAACAGTGAATAAGACAGCAAGGGAGAAAATATGAATGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTATAAAACAGTGAATAAGACAGCAAGGGAGAAAATATGAATGACC  300

seq1  AGAAACCAGGATAGGATGGGGGAAGAATTGGGTATGTAGAGAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGGATAGGATGGGGGAAGAATTGGGTATGTAGAGAGT  344