BAC Information

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BAC

Clone NameB6Ng01-015G23
Chromosome4 (Build37)
Map Location 58,917,324 - 59,038,483
singlet/doubletdoublet
Overlap geneAI314180, LOC100041581, Ltb4dh, 2010203O07Rik
Upstream geneD630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267
Downstream geneGng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G23.bB6Ng01-015G23.g
ACCDH849694DH849695
length4591,028
definitionDH849694|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G23, 5' end.DH849695|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,917,324 - 58,917,788)(59,037,459 - 59,038,483)
sequence
atggagtttcaaagaactatccagtatcatcgaaaaacaaaactagaatc
acactctttgtaatactaacagaataaaacagctttaaaaaaaaaaatca
cagtgcatattaaagtaacagaatcaagaatacccaattaccataaagat
gactcctctaataccttttttcagaagttaaaataagtgattccataata
atgttcctgaaactataaaatggttttttttgtatagcagattatcagtt
ataaactgtcatccattgtctctgcctgtgcacattgctaactaatattt
tcaaattttggattttttcttctttttttgctcattcttttatatttatc
accacagaaatagaaatatcaggcacatacaaactaacatgaacttcact
ggttctctcaggtaactaggaaaggaaaaaggaaaaatgggggtgggggg
agtgaagat
gaattcattacacaccaatgaagaaaggactaatagcaaactgtaaggaa
ggcatttatatgaataaaacccacaaggtattttgaagacttcaattaca
cgaatcgatgaaaaacaggcagcaatgaacagccatgctcagacagcccc
accccctcctccctgcactaacagggctgtaagggcctcaagtcttcttg
ggtgtctctaaaacgaagagatttcattttggtggaagagtgcagtgaag
tacagtgattactgtaagcaacggcctttctttccttcatcctgggaatt
tgaagcacagtgaacagaggggaggggaaaaccctccatctttctgtaga
gtccaccttgattcatgcaatgactgtgcccaagctctcacataagcagc
cctcagtggacaattctagaaatagaatacagaaataaaaaaagacagac
aaaagaatatccaaagatagtctgagtcttcactggctgaacatctctct
cttctccttatgaagaggtgtgctagtcagtctttactgtcaagctgatg
acttcaaactaactgtgaacagaacctcactgaggttggcctgtgggtat
gtctgagggatcgccttgataattgatgtaggaagccccagccagcagta
ccattccctagcaaggaaatgctgaacaacacgagaggcaaagatacata
tattctttccttactcttgtgggtatgatattacgaggtgtttgagcttt
agcctttcaccagaatgatggactgtaacctgcaactgtaagccacagaa
gtccttccctctacctactgcttcctggcatggtgtttgtcagagtacca
gaaaaatacaaacaatcagagatgtttggaaaatggtgagatacactagt
actggtatctctttcttgttcctatgacataattttgttcttagataata
aatgagtgacaggtggctaccgctgattcttcacaaccctaaagaataat
gaaccagaggtcaagcctgggtctacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_58917324_58917788
seq2: B6Ng01-015G23.b_47_511

seq1  GAATTCATGGAGTTTCAAAGAACTATCCAGTATCATCGAAAAACAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAGTTTCAAAGAACTATCCAGTATCATCGAAAAACAAAACT  50

seq1  AGAATCACACTCTTTGTAATACTAACAGAATAAAACAGCTTTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACACTCTTTGTAATACTAACAGAATAAAACAGCTTTAAAAAAAA  100

seq1  AAATCACAGTGCATATTAAAGTAACAGAATCAAGAATACCCAATTACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGTGCATATTAAAGTAACAGAATCAAGAATACCCAATTACCAT  150

seq1  AAAGATGACTCCTCTAATACCTTTTTTCAGAAGTTAAAATAAGTGATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGACTCCTCTAATACCTTTTTTCAGAAGTTAAAATAAGTGATTCC  200

seq1  ATAATAATGTTCCTGAAACTATAAAATGGTTTTTTTTGTATAGCAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGTTCCTGAAACTATAAAATGGTTTTTTTTGTATAGCAGATTA  250

seq1  TCAGTTATAAACTGTCATCCATTGTCTCTGCCTGTGCACATTGCTAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATAAACTGTCATCCATTGTCTCTGCCTGTGCACATTGCTAACTA  300

seq1  ATATTTTCAAATTTTGGATTTTTTCTTCTTTTTTTGCTCATTCTTTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCAAATTTTGGATTTTTTCTTCTTTTTTTGCTCATTCTTTTATA  350

seq1  TTTATCACCACAGAAATAGAAATATCAGGCACATACAAACTAACATGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACCACAGAAATAGAAATATCAGGCACATACAAACTAACATGAAC  400

seq1  TTCACTGGTTCTCTCAGGTAACTAGGAAAGGAAAAAGGAAAAATGGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGTTCTCTCAGGTAACTAGGAAAGGAAAAAGGAAAAATGGGGGT  450

seq1  GGGGGGAGTGAAGAT  465
      |||||||||||||||
seq2  GGGGGGAGTGAAGAT  465

seq1: chr4_59037459_59038483
seq2: B6Ng01-015G23.g_66_1093 (reverse)

seq1  TTGTAGA-CCAGGC-TGACCTCGGTGTTCATTATTCTTTAGGGTTGTGGA  48
      ||||||| |||||| ||||||| | ||||||||||||||||||||||| |
seq2  TTGTAGACCCAGGCTTGACCTCTG-GTTCATTATTCTTTAGGGTTGTGAA  49

seq1  GAATCAGCGTTAG-CACCTGTCACTCA-TTATTATCTAAGAACAAATTTA  96
      ||||||||| ||| ||||||||||||| |||||||||||||||||| |||
seq2  GAATCAGCGGTAGCCACCTGTCACTCATTTATTATCTAAGAACAAAATTA  99

seq1  TGTCATAAGGAAC-AGAAAGAGATACCAGTACTAGTGTATCTCACCATTT  145
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTCAT-AGGAACAAGAAAGAGATACCAGTACTAGTGTATCTCACCATTT  148

seq1  TCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCA  198

seq1  TGCCAGGAAGCAGTAGGTAGAGGGAAGGACTTCTGTGGCTTACAGTTGCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGAAGCAGTAGGTAGAGGGAAGGACTTCTGTGGCTTACAGTTGCA  248

seq1  GGTTACAGTCCATCATTCTGGTGAAAGGCTAAAGCTCAAACACCTCGTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAGTCCATCATTCTGGTGAAAGGCTAAAGCTCAAACACCTCGTAA  298

seq1  TATCATACCCACAAGAGTAAGGAAAGAATATATGTATCTTTGCCTCTCGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATACCCACAAGAGTAAGGAAAGAATATATGTATCTTTGCCTCTCGT  348

seq1  GTTGTTCAGCATTTCCTTGCTAGGGAATGGTACTGCTGGCTGGGGCTTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCAGCATTTCCTTGCTAGGGAATGGTACTGCTGGCTGGGGCTTCC  398

seq1  TACATCAATTATCAAGGCGATCCCTCAGACATACCCACAGGCCAACCTCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAATTATCAAGGCGATCCCTCAGACATACCCACAGGCCAACCTCA  448

seq1  GTGAGGTTCTGTTCACAGTTAGTTTGAAGTCATCAGCTTGACAGTAAAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTCTGTTCACAGTTAGTTTGAAGTCATCAGCTTGACAGTAAAGA  498

seq1  CTGACTAGCACACCTCTTCATAAGGAGAAGAGAGAGATGTTCAGCCAGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAGCACACCTCTTCATAAGGAGAAGAGAGAGATGTTCAGCCAGTG  548

seq1  AAGACTCAGACTATCTTTGGATATTCTTTTGTCTGTCTTTTTTTATTTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCAGACTATCTTTGGATATTCTTTTGTCTGTCTTTTTTTATTTCT  598

seq1  GTATTCTATTTCTAGAATTGTCCACTGAGGGCTGCTTATGTGAGAGCTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTATTTCTAGAATTGTCCACTGAGGGCTGCTTATGTGAGAGCTTG  648

seq1  GGCACAGTCATTGCATGAATCAAGGTGGACTCTACAGAAAGATGGAGGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTCATTGCATGAATCAAGGTGGACTCTACAGAAAGATGGAGGGT  698

seq1  TTTCCCCTCCCCTCTGTTCACTGTGCTTCAAATTCCCAGGATGAAGGAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTCCCCTCTGTTCACTGTGCTTCAAATTCCCAGGATGAAGGAAA  748

seq1  GAAAGGCCGTTGCTTACAGTAATCACTGTACTTCACTGCACTCTTCCACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCGTTGCTTACAGTAATCACTGTACTTCACTGCACTCTTCCACC  798

seq1  AAAATGAAATCTCTTCGTTTTAGAGACACCCAAGAAGACTTGAGGCCCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAATCTCTTCGTTTTAGAGACACCCAAGAAGACTTGAGGCCCTT  848

seq1  ACAGCCCTGTTAGTGCAGGGAGGAGGGGGTGGGGCTGTCTGAGCATGGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCTGTTAGTGCAGGGAGGAGGGGGTGGGGCTGTCTGAGCATGGCT  898

seq1  GTTCATTGCTGCCTGTTTTTCATCGATTCGTGTAATTGAAGTCTTCAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGCTGCCTGTTTTTCATCGATTCGTGTAATTGAAGTCTTCAAAA  948

seq1  TACCTTGTGGGTTTTATTCATATAAATGCCTTCCTTACAGTTTGCTATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGTGGGTTTTATTCATATAAATGCCTTCCTTACAGTTTGCTATTA  998

seq1  GTCCTTTCTTCATTGGTGTGTAATGAATTC  1025
      ||||||||||||||||||||||||||||||
seq2  GTCCTTTCTTCATTGGTGTGTAATGAATTC  1028