BAC Information

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BAC

Clone NameB6Ng01-015H07
Chromosome4 (Build37)
Map Location 37,051,909 - 37,052,808
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132
Downstream geneLOC545600, LOC621458, LOC277771
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015H07.bB6Ng01-015H07.g
ACCDH849710DH849711
length955904
definitionDH849710|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H07, 5' end.DH849711|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctagaagaaggagaaaaaacgaaaataagctatttcagagccct
cctagggacagacagaaaatgggagacgtcctgcttcctctctggctcct
atgaaaatatttttagcttcgaataggatatctgtgttctattgtctgtt
ttttggtgcaccaaattgtctatatgtctgttaattcatgtttgtttttg
tttggatggttgaatgattgttgttctgtgtttcatgttgaaaaatataa
aaagcagtctcagtctgcacagcaaaagttgacaagttagctgcatggtg
gctgggagacaagtacagctgaaaaagccctgctcagggtcgattgcaaa
tggagcttttaaaggggcaggcagccttttgcttgtaacagaaagttagc
ttaaagttggaaacccaaggttggagttattctaaacaacataagaaaac
aggtaatatgcaaaagcagtgtacaaagggtagaaagggtatgtttgaaa
ataaagtacatatctttacaaatagaaggaaaaccctttcaaggtataat
ggatataggagcagataaaagcattatatctagtaagtggtggcccgctt
cttggcctgttaatcaatcgtcacatagcttacaaggattaggatatgag
gctaccccaaactataagtgcaaaatcctttacaatggcaagataaagaa
ggaaggacaggactttttcagccttatgtactcccttttacctgtaaacg
tatggggaagagatgtgttgtcagccatgaacttttatactaactaatga
ctattctcaaaaagcaaggaaatgatgaaaggaatggaatatatacctgg
actagttttggaaaattttacaagatagaatttcacagttaaagccacag
aaaattcatgccagaaagggctggggttttctaggggccactggaggagc
ctttg
gaattcaatttgtataagcatttggctagtttgttgaaattttattaaaa
caaaataaaatcatagaatgattcatatttgactaatctccatgtgttgg
gaaaattcaaaaaaattccagtaatattaaatgacattgaaataatattt
actttgattatgcctttggttgtgtagttttctatgatggaggcattgta
ctcagttcacaggccttgaggtctaaaaatcagaataggaaatctgtctc
tagtagaggtcagccttgtatccaatgtaatagtgatatccaatattcaa
tcagtaacagatgtgcgacaccattgttataaagctcagtaataacttct
atacaacctctcttccactgtgctcctcacacaatgtgtccctgcactga
gttgcacaggaaaagaatgtgcaacatgcctagactcaaagactagggag
tggatatagtagtgatttgatcacacaatgacttcctttttttctgcagc
ttcatattcaattagcaagaattatatattaagctaactgtgtattctgt
aaatgtcctaggaatcattaacaaaccattaagagtaatttacaagccgc
atatgaagtacatgtcactggatacttcaaatgtactcatacagctcaaa
taatgtctttgcttctcttggaatttaaggtttttcttttccaaataaaa
acattttttaaggtgattatccattttgtagcaagaaatcttaaatacag
aattagtagagttagagttaatgatgtttttaatgaatttgaaattgtca
aatgctgacctttttgtgaaagcaaatttatcttattgtctgggagagtg
aataataactgtgcaactatagaaagctgtctggatagatataaatttag
tagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37051909_37052808
seq2: B6Ng01-015H07.g_71_974

seq1  GAATTCAATTTGTATAAGCATTTGGCTAGTTTGTTGAAATTTTATTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTGTATAAGCATTTGGCTAGTTTGTTGAAATTTTATTAAAA  50

seq1  CAAAATAAAATCATAGAATGATTCATATTTGACTAATCTCCATGTGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAATCATAGAATGATTCATATTTGACTAATCTCCATGTGTTGG  100

seq1  GAAAATTCAAAAAAATTCCAGTAATATTAAATGACATTGAAATAATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCAAAAAAATTCCAGTAATATTAAATGACATTGAAATAATATTT  150

seq1  ACTTTGATTATGCCTTTGGTTGTGTAGTTTTCTATGATGGAGGCATTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATTATGCCTTTGGTTGTGTAGTTTTCTATGATGGAGGCATTGTA  200

seq1  CTCAGTTCACAGGCCTTGAGGTCTAAAAATCAGAATAGGAAATCTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCACAGGCCTTGAGGTCTAAAAATCAGAATAGGAAATCTGTCTC  250

seq1  TAGTAGAGGTCAGCCTTGTATCCAATGTAATAGTGATATCCAATATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAGGTCAGCCTTGTATCCAATGTAATAGTGATATCCAATATTCAA  300

seq1  TCAGTAACAGATGTGCGACACCATTGTTATAAAGCTCAGTAATAACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAACAGATGTGCGACACCATTGTTATAAAGCTCAGTAATAACTTCT  350

seq1  ATACAACCTCTCTTCCACTGTGCTCCTCACACAATGTGTCCCTGCACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACCTCTCTTCCACTGTGCTCCTCACACAATGTGTCCCTGCACTGA  400

seq1  GTTGCACAGGAAAAGAATGTGCAACATGCCTAGACTCAAAGACTAGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCACAGGAAAAGAATGTGCAACATGCCTAGACTCAAAGACTAGGGAG  450

seq1  TGGATATAGTAGTGATTTGATCACACAATGACTTCCTTTTTTTCTGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATAGTAGTGATTTGATCACACAATGACTTCCTTTTTTTCTGCAGC  500

seq1  TTCATATTCAATTAGCAAGAATTATATATTAAGCTAACTGTGTATTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTCAATTAGCAAGAATTATATATTAAGCTAACTGTGTATTCTGT  550

seq1  AAATGTCCTAGGAATCATTAACAAACCATTAAGAGTAATTTACAAGCCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTAGGAATCATTAACAAACCATTAAGAGTAATTTACAAGCCGC  600

seq1  ATATGAAGTACATGTCACTGGATACTTCAAATGTACTCATACAGCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGTACATGTCACTGGATACTTCAAATGTACTCATACAGCTCAAA  650

seq1  TAATGTCTTTGCTTCTCTTGGAATTTAAGGTTTT--CTTTCCAAATAAAA  698
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  TAATGTCTTTGCTTCTCTTGGAATTTAAGGTTTTTCTTTTCCAAATAAAA  700

seq1  ACATTTTTTAAGGTGATTATCCA-TTTGTAGCAAGAAATCTTAAATACAG  747
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACATTTTTTAAGGTGATTATCCATTTTGTAGCAAGAAATCTTAAATACAG  750

seq1  AATTAGTAGAGTTAGAGTTAATGATG-TTTTAATGAATTTGAAATTGTCA  796
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATTAGTAGAGTTAGAGTTAATGATGTTTTTAATGAATTTGAAATTGTCA  800

seq1  AATGCTGACCTTTTTGTGAAAGCAAATTTATCTTATTGTCTGGGAGAGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGACCTTTTTGTGAAAGCAAATTTATCTTATTGTCTGGGAGAGTG  850

seq1  AATAATAACTGTGCAACTATAGAAAGCTGTCTGGATAGATATAAATTTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAACTGTGCAACTATAGAAAGCTGTCTGGATAGATATAAATTTAG  900

seq1  TAGC  900
      ||||
seq2  TAGC  904