BAC Information

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BAC

Clone NameB6Ng01-015I08
Chromosome4 (Build37)
Map Location 64,198,820 - 64,199,868
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015I08.bB6Ng01-015I08.g
ACCDH849752DH849753
length1,0251,050
definitionDH849752|Mus musculus domesticus DNA, BAC clone: B6Ng01-015I08, 5' end.DH849753|Mus musculus domesticus DNA, BAC clone: B6Ng01-015I08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgacttgtagaatacttgtagagttacacaatgactccataa
tctgatttcatgatatgtttatcctggtctatggaagcctcctagacact
agaatccattgcccattctttttcagcccattaatagaatttatatattt
gtatgattccctactatttgtatgtttcacaaaacaatatcattcaatgt
gcagttttatgactgagttgtttaaattagcaaaatattttctgttacct
tcacagttttggcactaatggtaaatatgacatttagaaagtaaatcctt
aaaaccacatgctattgaggtttacatcaagtttcttgcctagtaaacaa
gctattgcttcgatgtttctctaagatagctgggagacacatgggggaaa
actgaaacttgacagcccagaaacctagggtaagagcaagtactattgtt
ctactaaaagaacctagaaatataacaaataaaaggaaaaaagtataaaa
ttcctaatgacattctgctgtatggatggagaagtgccctgctcagccat
catagtgaatcttccttctgcagggaatgagaacaaatacagagaccccc
ccccccagacataaaatattcagagagtgagagatagtggaatattcagc
cctaaatgggatgcctctctaaaatccctctcctctggtatcagagggcc
tgcagaagaggaggcaaaatgtataagagccaaagggatagaagccaaca
agaaaacaatgtcttctaaaataaacaaaatgctcttagggggaggtggc
atgtccagaagaagttggccaatagaaaatgagctcaatggcgcattgga
ggttgctcttctcataatgttctgtaagagctttcttttttaccttacct
tatacgtttttaatattatacatgtccttgcatatctactatggtttcag
ttactgtttttatgatctgagtatgtgacagtagtctgagtctgtgtctg
ttcagtgcagggggagaagggggga
gaattctttgtgcaagaaaatctcgtaagcagcgagaggttatgagcctt
ggatggagtatccaataagaagttttagatactgattctgaaatcattga
ctccgtgattctgaatgaagtgtgctcattgatttcacgtagaacctgct
tacttcttaactggcaaaggaatacactatggagacagaggggaggattt
ctcagactctgagttagttataaaagttgtcaaagtaacgcaatgtcaaa
tgctttcaaagaggaaacttcacgaaaaacagctatatctcaaatgtcca
gcacataaatataaacagatttgttctacacaggccattaattgctttca
caaagtcagtgtgcttacttgaaccctacttgaactagctgtttgctggt
gcagtcactactgaaagaaagatttcttaaaggctttgggttgctcccac
ttcttgtcatagaatgatccaaattttatgtctgtttattactttgtagc
ccagctggaccccagaaggatggagttgttgcgaccatggaaaaacacaa
ctgcacacagataccgaaatgaagccagtgatgtcctggaggcttagata
aacatttagtctcataaataaatacattatcagaccacacaaaatatttc
ttaaccagacgcctcctcagaagtcatcttccaagtatcattttaagttt
ttccatgttcgaagaatcaagaaggttattgatcatgtacgggctaacca
acccttaactatatgtttccagacaatatagtaatatggtttcttgtaga
cattgatatagaatctgaacacatacttaagtagtcaataacattccagg
gtgaaaatcaactttgcacacagtagacaacagattgtaattttaagaat
tttccatttcatttctcaaaaagatatattcacttttctttgattaaaca
aacatctaaacaatcttgttgaccaggcactctcctagacactgacagta
gcttgaaaacttgcttcatttgtaatcaattcccttactgatataaaggt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64198820_64199868
seq2: B6Ng01-015I08.g_67_1112

seq1  GAATTCTTTGTGCAAGAAAATCTCGTAAGCAGCGAGAGGTTATGAGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGCAAGAAAATCTCGTAAGCAGCGAGAGGTTATGAGCCTT  50

seq1  GGATGGAGTATCCAATAAGAAGTTTTAGATACTGATTCTGAAATCATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGTATCCAATAAGAAGTTTTAGATACTGATTCTGAAATCATTGA  100

seq1  CTCCGTGATTCTGAATGAAGTGTGCTCATTGATTTCACGTAGAACCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTGATTCTGAATGAAGTGTGCTCATTGATTTCACGTAGAACCTGCT  150

seq1  TACTTCTTAACTGGCAAAGGAATACACTATGGAGACAGAGGGGAGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTAACTGGCAAAGGAATACACTATGGAGACAGAGGGGAGGATTT  200

seq1  CTCAGACTCTGAGTTAGTTATAAAAGTTGTCAAAGTAACGCAATGTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTCTGAGTTAGTTATAAAAGTTGTCAAAGTAACGCAATGTCAAA  250

seq1  TGCTTTCAAAGAGGAAACTTCACGAAAAACAGCTATATCTCAAATGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAAAGAGGAAACTTCACGAAAAACAGCTATATCTCAAATGTCCA  300

seq1  GCACATAAATATAAACAGATTTGTTCTACACAGGCCATTAATTGCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAATATAAACAGATTTGTTCTACACAGGCCATTAATTGCTTTCA  350

seq1  CAAAGTCAGTGTGCTTACTTGAACCCTACTTGAACTAGCTGTTTGCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGTGTGCTTACTTGAACCCTACTTGAACTAGCTGTTTGCTGGT  400

seq1  GCAGTCACTACTGAAAGAAAGATTTCTTAAAGGCTTTGGGTTGCTCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCACTACTGAAAGAAAGATTTCTTAAAGGCTTTGGGTTGCTCCCAC  450

seq1  TTCTTGTCATAGAATGATCCAAATTTTATGTCTGTTTATTACTTTGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCATAGAATGATCCAAATTTTATGTCTGTTTATTACTTTGTAGC  500

seq1  CCAGCTGGACCCCAGAAGGATGGAGTTGTTGCGACCATGGAAAAACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGACCCCAGAAGGATGGAGTTGTTGCGACCATGGAAAAACACAA  550

seq1  CTGCACACAGATACCGAAATGAAGCCAGTGATGTCCTGGAGGCTTAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACACAGATACCGAAATGAAGCCAGTGATGTCCTGGAGGCTTAGATA  600

seq1  AACATTTAGTCTCATAAATAAATACATTATCAGACCACACAAAATATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAGTCTCATAAATAAATACATTATCAGACCACACAAAATATTTC  650

seq1  TTAACCAGACGCCTCCTCAGAAGTCATCTTCCAAGTATCATTTTAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGACGCCTCCTCAGAAGTCATCTTCCAAGTATCATTTTAAGTTT  700

seq1  TTCCATGTTCGAAGAATCAAGAAGGTTATTGATCATGTACGGGCTAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTTCGAAGAATCAAGAAGGTTATTGATCATGTACGGGCTAACCA  750

seq1  ACCC-TAACTATATGTTTCCAGACAATATAGTAATATGGTTTCTTGTAGA  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTAACTATATGTTTCCAGACAATATAGTAATATGGTTTCTTGTAGA  800

seq1  CATTGATATAGAATCTGAACACATACTTAAGTAGCCAATAACATTCCAGG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CATTGATATAGAATCTGAACACATACTTAAGTAGTCAATAACATTCCAGG  850

seq1  GTGAATATCAACTTGCAACACAGTAGACAACAGATTGTAA-TGTAAGAAT  898
      ||||| ||||||||   ||||||||||||||||||||||| | |||||||
seq2  GTGAAAATCAACTTTGCACACAGTAGACAACAGATTGTAATTTTAAGAAT  900

seq1  TTTCCATTTCATTTCTCAAAAAGATATATTCACTTTTCCTTTGATTAAAC  948
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCCATTTCATTTCTCAAAAAGATATATTCACTTTT-CTTTGATTAAAC  949

seq1  AAACATCTAAACAATTCTTGTTGACCAGGCACTCTCCTAGACACTGACAG  998
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAACATCTAAACAA-TCTTGTTGACCAGGCACTCTCCTAGACACTGACAG  998

seq1  TAGCTTGAAAAACCTTGCTTCATTTGTAAATCAATTCCCTTACTGATATA  1048
      |||||||||||  |||||||||||||| ||||||||||||||||||||||
seq2  TAGCTTGAAAA--CTTGCTTCATTTGT-AATCAATTCCCTTACTGATATA  1045

seq1  A  1049
      |
seq2  A  1046