BAC Information

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BAC

Clone NameB6Ng01-016C22
Chromosome4 (Build37)
Map Location 45,821,126 - 45,983,563
singlet/doubletdoublet
Overlap geneIgfbpl1, 1300002K09Rik
Upstream geneZcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580, Aldh1b1
Downstream geneTdrd7, Tmod1, BC057893, AU014645, Xpa, LOC624430, LOC666379, LOC666389, Foxe1, 5830415F09Rik, Hemgn, LOC100040643, Anp32b, Nans, Trim14, Coro2a, Tbc1d2, Gabbr2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016C22.bB6Ng01-016C22.g
ACCDH850226DH850227
length1,025942
definitionDH850226|Mus musculus domesticus DNA, BAC clone: B6Ng01-016C22, 5' end.DH850227|Mus musculus domesticus DNA, BAC clone: B6Ng01-016C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,982,543 - 45,983,563)(45,821,126 - 45,822,055)
sequence
gaattctgtatataaaataaatcatgaaacaatgtgcatgaaccctaagt
ctgaggtcctttatgcttatagatatgtccccccctttgctgtatccgat
atacaaagaaaagtcatgtgctgcagctagttttccataaccagctttat
ttacgaatagttgccacaagcaaatatttttaagtacggcagtctgatga
gttttaacaaatgtatccagttgcgcaacaaccatcacaatcaagatgca
taactagttttatttgtagaagttccctgagccttctacctagccctgtt
ccctccctcttcccaccactcctggcagctgggtgagagttcagtcccct
cagctttgttttctcaggagcaccatatgtagggaaccgcaggatgtgca
gcctttgtgcctgggttttcacttagtgtaatgcgttcgtgactcattcc
tgttgagcttatcaatagttacttcctgttgatggctgtcactgtatggc
tatgcacaactagtttattcctcgaatttagtgtgcatttttgttgtttc
tagtctgggggggggggcctgttctggtccaagcacctataaataaccat
tgtgtagtcaaatggttttctcacatacataccagggaatagaattaatg
tcaggatgtaggagaaatgtattgttgattgtatatatttatggatatga
gtatatgctttatgtgtatttaaccatagataatgtagaaattatatgca
taattacgtgtgaatggcaaagtgcaaacttaaagtggccacatctcttt
gtactcccatttttatccacgactccgccccctgtaaagcatggattcca
ctcatttctcagtacttcagcatcaccaggcttttaaatggagcttgacc
ctgtaagggtggaacatggccgctgcggcactgagggaccggtctcatat
tgagccttaactccgctttctccttaaggcttgaagcatcttttctcgtc
cacagtgggcttttgattttgttct
gaattcattaagctgcagacaccagagcaatgtggtttcccttaattaat
taaaatatcacgtaataagtctctctgatttaacgttcatgagttcccag
ggaagcccgagaatgaggaaagtcattagaggggacagttccctgctgca
tggctctgattgtctgccctacatcctcaatcctgggagacaggagagtg
gcattttctaaagataggaattaatttcattgcaaaacctgtaggaaaac
tatgcaccttactaagagccaggtctttggtggtctaggatagtaaggga
acaagcacctttggggttgaacacaggctttataatcactgtggtacccc
cttacctgtagagaatacattccaagactcctcagagacaatgttcagac
tgtgtttcatgtgtatgcgtgtccacgtttgtgcagataaacaggtgtat
gcgggcacatgagcatgcaggtgcacacatgagtgtgtgtacctgtggaa
ggcagaggatctcagatgtcattcttcagaagtgaccttattttttgagc
cagggtctctcgttggctggtagcttgctgattagggctaggctgtctag
acagtgagccccagggatctagctatctttacttcccaggtctggaattg
aaggtttgcaccattgtaccctgctgctgccgctgcctcctcctcctcct
cctagtacacaccagatgaaggcatcggatcccattacagatggctgtga
gttcaccatgtggtgctgggacgtgaaactcatgacctctgggaagagca
gtcagtgctctttaaccactgagccatctctccaggccccacgcccaagc
tttcttatgtgggttttgtggctcaagcccgggtccacgactttgtgttg
aaagcactttttccttataattctatgtttttttttttccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45982543_45983563
seq2: B6Ng01-016C22.b_41_1065 (reverse)

seq1  AGAACAAATACAAAAG-CCACTGTGTACAGGAAAAGATGCTCCACGCCAT  49
      ||||||||  |||||| |||||||| ||  ||||||||||| || ||| |
seq2  AGAACAAAATCAAAAGCCCACTGTGGACGAGAAAAGATGCTTCAAGCC-T  49

seq1  CATGGAGAAAGGCGAGTTAAAGCCTCAATATGAGACCGGTCCCTCAGTGC  99
       | ||||||||  ||||| ||| |||||||||||||||||||||||||||
seq2  TAAGGAGAAAGCGGAGTT-AAGGCTCAATATGAGACCGGTCCCTCAGTGC  98

seq1  CGCAGCGGCAATGTTCCACCCTTACAGGGTCAAGCTCCATTTTAAAAGCC  149
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  CGCAGCGGCCATGTTCCACCCTTACAGGGTCAAGCTCCA-TTTAAAAGCC  147

seq1  TGGTGATGCTG-AGTACTGAG-AATGAGTGGACT-CATGCTTTACAGGGG  196
      ||||||||||| ||||||||| |||||||||| | |||||||||||||||
seq2  TGGTGATGCTGAAGTACTGAGAAATGAGTGGAATCCATGCTTTACAGGGG  197

seq1  GCGGAGTCGTGGATAAAAATGGGAGTACAAAGAGATGTGGCCAC-TTAAG  245
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCGGAGTCGTGGATAAAAATGGGAGTACAAAGAGATGTGGCCACTTTAAG  247

seq1  ATTGCACTTTGACATTCACATGTAATTATGCATATAA-TTATACATTATC  294
       |||||||||| |||||||| |||||||||||||||| || |||||||||
seq2  TTTGCACTTTGCCATTCACACGTAATTATGCATATAATTTCTACATTATC  297

seq1  TATGGTTAAATACACAT-AAGCATATACTCATATCCATAAATATATACAA  343
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATGGTTAAATACACATAAAGCATATACTCATATCCATAAATATATACAA  347

seq1  TCAACAATACATTTCTCCTACATCCTGACATTAATTCTATTCCCTGGTAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATACATTTCTCCTACATCCTGACATTAATTCTATTCCCTGGTAT  397

seq1  GTATGTGAGAAAACCATTTGACTACACAATGGTTATTTATAGGTGCTTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGAGAAAACCATTTGACTACACAATGGTTATTTATAGGTGCTTGG  447

seq1  ACCAGAACAGGCCCCCCCCCCCAGACTAGAAACAACAAAAATGCACACTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAACAGGCCCCCCCCCCCAGACTAGAAACAACAAAAATGCACACTA  497

seq1  AATTCGAGGAATAAACTAGTTGTGCATAGCCATACAGTGACAGCCATCAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGAGGAATAAACTAGTTGTGCATAGCCATACAGTGACAGCCATCAA  547

seq1  CAGGAAGTAACTATTGATAAGCTCAACAGGAATGAGTCACGAACGCATTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTAACTATTGATAAGCTCAACAGGAATGAGTCACGAACGCATTA  597

seq1  CACTAAGTGAAAACCCAGGCACAAAGGCTGCACATCCTGCGGTTCCCTAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTGAAAACCCAGGCACAAAGGCTGCACATCCTGCGGTTCCCTAC  647

seq1  ATATGGTGCTCCTGAGAAAACAAAGCTGAGGGGACTGAACTCTCACCCAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTGCTCCTGAGAAAACAAAGCTGAGGGGACTGAACTCTCACCCAG  697

seq1  CTGCCAGGAGTGGTGGGAAGAGGGAGGGAACAGGGCTAGGTAGAAGGCTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGAGTGGTGGGAAGAGGGAGGGAACAGGGCTAGGTAGAAGGCTC  747

seq1  AGGGAACTTCTACAAATAAAACTAGTTATGCATCTTGATTGTGATGGTTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACTTCTACAAATAAAACTAGTTATGCATCTTGATTGTGATGGTTG  797

seq1  TTGCGCAACTGGATACATTTGTTAAAACTCATCAGACTGCCGTACTTAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCAACTGGATACATTTGTTAAAACTCATCAGACTGCCGTACTTAAA  847

seq1  AATATTTGCTTGTGGCAACTATTCGTAAATAAAGCTGGTTATGGAAAACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCTTGTGGCAACTATTCGTAAATAAAGCTGGTTATGGAAAACT  897

seq1  AGCTGCAGCACATGACTTTTCTTTGTATATCGGATACAGCAAAGGGGGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAGCACATGACTTTTCTTTGTATATCGGATACAGCAAAGGGGGGG  947

seq1  ACATATCTATAAGCATAAAGGACCTCAGACTTAGGGTTCATGCACATTGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCTATAAGCATAAAGGACCTCAGACTTAGGGTTCATGCACATTGT  997

seq1  TTCATGATTTATTTTATATACAGAATTC  1021
      ||||||||||||||||||||||||||||
seq2  TTCATGATTTATTTTATATACAGAATTC  1025

seq1: chr4_45821126_45822055
seq2: B6Ng01-016C22.g_71_1012

seq1  GAATTCATTAAGCTGCAGACACCAGAGCAATGTGGTTTCCCTTAATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAGCTGCAGACACCAGAGCAATGTGGTTTCCCTTAATTAAT  50

seq1  TAAAATATCACGTAATAAGTCTCTCTGATTTAACGTTCATGAGTTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATCACGTAATAAGTCTCTCTGATTTAACGTTCATGAGTTCCCAG  100

seq1  GGAAGCCCGAGAATGAGGAAAGTCATTAGAGGGGACAGTTCCCTGCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCGAGAATGAGGAAAGTCATTAGAGGGGACAGTTCCCTGCTGCA  150

seq1  TGGCTCTGATTGTCTGCCCTACATCCTCAATCCTGGGAGACAGGAGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGATTGTCTGCCCTACATCCTCAATCCTGGGAGACAGGAGAGTG  200

seq1  GCATTTTCTAAAGATAGGAATTAATTTCATTGCAAAACCTGTAGGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCTAAAGATAGGAATTAATTTCATTGCAAAACCTGTAGGAAAAC  250

seq1  TATGCACCTTACTAAGAGCCAGGTCTTTGGTGGTCTAGGATAGTAAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACCTTACTAAGAGCCAGGTCTTTGGTGGTCTAGGATAGTAAGGGA  300

seq1  ACAAGCACCTTTGGGGTTGAACACAGGCTTTATAATCACTGTGGTACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCACCTTTGGGGTTGAACACAGGCTTTATAATCACTGTGGTACCCC  350

seq1  CTTACCTGTAGAGAATACATTCCAAGACTCCTCAGAGACAATGTTCAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTGTAGAGAATACATTCCAAGACTCCTCAGAGACAATGTTCAGAC  400

seq1  TGTGTTTCATGTGTATGCGTGTCCACGTTTGTGCAGATAAACAGGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCATGTGTATGCGTGTCCACGTTTGTGCAGATAAACAGGTGTAT  450

seq1  GCGGGCACATGAGCATGCAGGTGCACACATGAGTGTGTGTACCTGTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGCACATGAGCATGCAGGTGCACACATGAGTGTGTGTACCTGTGGAA  500

seq1  GGCAGAGGATCTCAGATGTCATTCTTCAGAAGTGACCTTATTTTTTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGATCTCAGATGTCATTCTTCAGAAGTGACCTTATTTTTTGAGC  550

seq1  CAGGGTCTCTCGTTGGCTGGTAGCTTGCTGATTA-GGCTAGGCTGTCTAG  599
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGGGTCTCTCGTTGGCTGGTAGCTTGCTGATTAGGGCTAGGCTGTCTAG  600

seq1  ACAGTGAGCCCCAGGGATCTAGCTATCTTTACTTCCCAGGTCTGGAATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGCCCCAGGGATCTAGCTATCTTTACTTCCCAGGTCTGGAATTG  650

seq1  AAGGTTTGCACCATTGTACCCTGCTGCTGCCGCTGCCTCCTCCTCCTCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGCACCATTGTACCCTGCTGCTGCCGCTGCCTCCTCCTCCTCCT  700

seq1  CCTAGTACACACCAGATGAAGGCATCGGATCCCATTACAGATGGCTGTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTACACACCAGATGAAGGCATCGGATCCCATTACAGATGGCTGTGA  750

seq1  G-TCACCATGTGGTTGCTGGGACGTG-AACTCAGGACCTCT-GGAAGAGC  796
      | ||||||||||| |||||||||||| |||||| ||||||| ||||||||
seq2  GTTCACCATGTGG-TGCTGGGACGTGAAACTCATGACCTCTGGGAAGAGC  799

seq1  AGTCAGTGCTC-TTAACCACTGAGCCATCTCTCCA-GCCCCACGCCC-AG  843
      ||||||||||| ||||||||||||||||||||||| ||||||||||| ||
seq2  AGTCAGTGCTCTTTAACCACTGAGCCATCTCTCCAGGCCCCACGCCCAAG  849

seq1  C-TTCTTATGTGGGTTTTGTGGCTCAAGCCCGGGTCCACGAC-TTGTGTG  891
      | |||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  CTTTCTTATGTGGGTTTTGTGGCTCAAGCCCGGGTCCACGACTTTGTGTT  899

seq1  GAAAGCACTTTT--CCTAT-ATTCTATG-TTTTTTTTTTCCTA  930
      ||||||||||||  | ||| |||||||| ||||||||||||||
seq2  GAAAGCACTTTTTCCTTATAATTCTATGTTTTTTTTTTTCCTA  942