BAC Information

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BAC

Clone NameB6Ng01-016J23
Chromosome4 (Build37)
Map Location 92,992,091 - 92,993,023
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269, LOC384125
Downstream geneTusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016J23.bB6Ng01-016J23.g
ACCDH850538DH850539
length1,2071,001
definitionDH850538|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J23, 5' end.DH850539|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctgcaccccatttttaatggggttatttgattt
tttggagtccaccttcttgagttctttatatatatttgatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagaagctttgcagttttat
gaggtctcatttgtagattctccattttacagcacaaaccattgctgttc
tattcaggaattttccccctgagcccatgtctttgaggcttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ccacttagatttcaccttagtacaaggagataggaatggatcaattcaca
ttcttctacatgataaccaccagttgtgccagcaccatttgttaaaaatg
gtgtctttgttccactggatgattttagctcccttgtcaaagatcaagtg
accataggtatgttggttcatttcaaggtcttcaattctattccattggt
ctacttgtctgtctctataacagtaccatgcagtttttatcacaattgct
ctttagtacaactttaggtcaggcatggtgattccaacagaggttctttt
atccttgagaagagtttttgatatcctaggatttttattattccagatga
atttgcagattgccctttctaattcgttgaagaatcgagttggtattttg
atggggattgcattgaatctctagattgcttttggcaagatagccatttt
tacaatgttaatcctgtcaatccatgagcatgggagatctttccatcttc
tgaaatcttctttaatttctttcttcggagacttgaagttcttatcatac
agatctttcacttccttagttagagtcacgccaaggtatttatattattt
gtgactattgagaagggtgttgtttccctaatttctttctcaccttgttt
atccttgttacagaaaggcaatgacttggtttgagtattttatatcagta
ctttactgaagctgttatcagttaggagtccttgtggaattttaggtcac
gttatatacatcaattcactggcaaagtgaaattcggactcgttcttcct
aatgaatctactcgaatgctgccgaatgctcatgtctgactctaaggact
catagat
gaattccaggacagccagagctacacagagaaaccctgtctcaaaaaaca
aaacaaaacaaaacaacaacaaaaagaataactaataagagaatgcatat
gatattacaagacaatattatgcatatttttctttgatactcacatggca
gaaagggtgagtactggttgttcgatgacctttgagccaactataccact
cctacagatgtcatttagaagaattagttgcttctcaaaggtcccacttc
ctaataatattatgaaaatgagattactgtcttaatatgtgaccttcagg
gatgatggtacattcagtacatgcattggccaatgccaagttaaaacaac
atgatgaaatatcttgcccattgatagtgttcatttaccaactgggaaag
ccagagactgggtctacctaattttactctacacacaaactacaagaatt
tacactgtgctagatagttttatttcaacttgatgcaatctaaagacatc
caaagaggagggaattccaattaagagttaatcctgcgctccagccctcc
ctacccaacccacacagagagacattttaatccccaggagttctcacata
cccaggaacacaggtgaggccccaacccctgccccaatacaggtcctaac
tgggacctcccagaccccctagggctcagaggaagcaggaactgccacag
ccagagacacattccttccaactcaccacctcctgttctctattctctcc
ctcctgccctgcccacaaccagagacagctttaccataaaggagttctga
caaagccaggcgcacagttcagatgctccagataccccatacccagaaac
agcctgaccaaaggaggcttaacataaccaggctcacagtaggaacaggt
tccagtcaggacagcaattccagttaatgagataaccagatggtgagagc
aagcacagacattaacacagaaaccaatgctacttgtcaacatcagaacc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92992091_92993023
seq2: B6Ng01-016J23.g_67_999 (reverse)

seq1  ATCTCATTAACTGGAATTGCTGTCCCTGACTGGAACCTGTTCCTACTGTG  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATCTCATTAACTGGAATTGCTGT-CCTGACTGGAACCTGTTCCTACTGTG  49

seq1  AGCCTGGTTATGTTAAGCCTCCTTTGGTCAGGCTGTTTCTGGGTATGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTTATGTTAAGCCTCCTTTGGTCAGGCTGTTTCTGGGTATGGGG  99

seq1  TATCTGGAGCATCTGAACTGTGCGCCTGGCTTTGTCAGAACTCC-TTATG  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATCTGGAGCATCTGAACTGTGCGCCTGGCTTTGTCAGAACTCCTTTATG  149

seq1  GTAAAGCTGTCTCTGGTTGTGGGCAGGGCAGGAGGGAGAGAATAGAGAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGTCTCTGGTTGTGGGCAGGGCAGGAGGGAGAGAATAGAGAAC  199

seq1  AGGAGGTGGTGAGTTGGAAGGAATGTGTCTCTGGCTGTGGCAGTTCCTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGGTGAGTTGGAAGGAATGTGTCTCTGGCTGTGGCAGTTCCTGC  249

seq1  TTCCTCTGAGCCCTAGGGGGTCTGGGAGGTCCCAGTTAGGACCTGTATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGAGCCCTAGGGGGTCTGGGAGGTCCCAGTTAGGACCTGTATTG  299

seq1  GGGCAGGGGTTGGGGCCTCACCTGTGTTCCTGGGTATGTGAGAACTCCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGGGTTGGGGCCTCACCTGTGTTCCTGGGTATGTGAGAACTCCTG  349

seq1  GGGATTAAAATGTCTCTCTGTGTGGGTTGGGTAGGGAGGGCTGGAGCGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAATGTCTCTCTGTGTGGGTTGGGTAGGGAGGGCTGGAGCGCA  399

seq1  GGATTAACTCTTAATTGGAATTCCCTCCTCTTTGGATGTCTTTAGATTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAACTCTTAATTGGAATTCCCTCCTCTTTGGATGTCTTTAGATTGC  449

seq1  ATCAAGTTGAAATAAAACTATCTAGCACAGTGTAAATTCTTGTAGTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTGAAATAAAACTATCTAGCACAGTGTAAATTCTTGTAGTTTGT  499

seq1  GTGTAGAGTAAAATTAGGTAGACCCAGTCTCTGGCTTTCCCAGTTGGTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGTAAAATTAGGTAGACCCAGTCTCTGGCTTTCCCAGTTGGTAA  549

seq1  ATGAACACTATCAATGGGCAAGATATTTCATCATGTTGTTTTAACTTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACTATCAATGGGCAAGATATTTCATCATGTTGTTTTAACTTGGC  599

seq1  ATTGGCCAATGCATGTACTGAATGTACCATCATCCCTGAAGGTCACATAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCAATGCATGTACTGAATGTACCATCATCCCTGAAGGTCACATAT  649

seq1  TAAGACAGTAATCTCATTTTCATAATATTATTAGGAAGTGGGACCTTTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGTAATCTCATTTTCATAATATTATTAGGAAGTGGGACCTTTGA  699

seq1  GAAGCAACTAATTCTTCTAAATGACATCTGTAGGAGTGGTATAGTTGGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACTAATTCTTCTAAATGACATCTGTAGGAGTGGTATAGTTGGCT  749

seq1  CAAAGGTCATCGAACAACCAGTACTCACCCTTTCTGCCATGTGAGTATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCATCGAACAACCAGTACTCACCCTTTCTGCCATGTGAGTATCA  799

seq1  AAGAAAAATATGCATAATATTGTCTTGTAATATCATATGCATTCTCTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATATGCATAATATTGTCTTGTAATATCATATGCATTCTCTTAT  849

seq1  TAGTTATTCTTTTTGTTGTTGTTTTGTTTTGTTTTGTTTTTTGAGACAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATTCTTTTTGTTGTTGTTTTGTTTTGTTTTGTTTTTTGAGACAGG  899

seq1  GTTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTC  933
      ||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTGTAGCTCTGGCTGTCCTGGAATTC  933