BAC Information

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BAC

Clone NameB6Ng01-016P19
Chromosome4 (Build37)
Map Location 141,698,431 - 141,858,929
singlet/doubletdoublet
Overlap gene9030409G11Rik
Upstream geneFbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik, Fblim1, BC025833, Slc25a34, Plekhm2, Ddi2, Agmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51
Downstream geneEG665983, LOC546484, 6330411D24Rik, Prdm2, LOC666018, EG626575, LOC433776, Pdpn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016P19.bB6Ng01-016P19.g
ACCDH850797DH850798
length875645
definitionDH850797|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P19, 5' end.DH850798|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,698,431 - 141,699,306)(141,858,287 - 141,858,929)
sequence
gaattcccattctgaagggcccaggaatctgcattaaagatgtctgtagt
ctggggctagagagatggctcagtggttaagagcaacgactgctcttctg
gaagacccagtttcgattcccagcacccacactgtggctcacaactatct
gtagctacagttccagaggatctgataccttcgcagagacaaacatgcat
gcaaaacaccaatgcacatcaaataaaaataagtcattaatatatatata
aagtgtatgtatgtctggggtcttatctaggggaaccttatgcagatgga
tagcgcacagacagaaaatgtgaaacatcttaatactagagatgctgccc
tcaagaccttctctgtgtgcctttctcatactgttgacaaaaatggggcc
agacctaccagcagccaggggctggaaatgcccactgcccgtggttccgt
ctttgaagaatgaagctaacgataatccagagacctaggtgcaaggggaa
gatgctcaccgcagcagcaacaggatacggggtgtgtggtgtgcacagtg
ggcttacaggatagagatgtgtagtgtgcacagtgagcctaccaggtcag
gcagagtgtatgctcgggtgccagcacacgtgtgtgactcaaagaggggt
tctattcctctctgtcttgggcagcccaaaactggcattgagatgattga
cagttcagagcaacaaggctgggagaggacaaggtggggtggagggaggc
tccaggcacccaaggtagctatacccacctgtacatagggttgtgtggtt
ctttctgaactgggccgggactgttcgccctttagccaaagagaagaaga
ttgatgcatctacacaggacacacg
gaattcaaatccaagctttaacctgctctggtagaccccagtgctggtga
catatacacatgtgtttaccagggaggacctgagcctcaaaaaagagaaa
tgagtgggttaggtggctgagatgcaaatccacccagcggcctcccaggg
gtcaggtgcagtcctctgtctttaacaatggtttctggaggcactccaga
agctgggggcaggggtgggggaggaacaggtttaaaagagggaaggcagt
tggtgctgttgctgatgctggggcagagttgtacctctggctggggctgg
cctggatttcaatatctgataaggtacagagcctctgacaaggcagcatc
cttcttgctggaaggatgtttgtcccagtctcctattgctgacttgcctg
cagggctgccagcagagaatagtagactgctgcctctactccctgagaaa
acacttccgcattccttatctggcctctgcagagtgggctttctttcaca
tagatgcagaaactgaagctgtgtagaagagagactcagacacatctcca
ctgagtctgtccatggactcctcctctgacaaccacaagatgagtgtctc
aggtcgcccagcagatccctgtgggttggggtggtttctatctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_141698431_141699306
seq2: B6Ng01-016P19.b_47_921

seq1  GAATTCCCATTCTGAAGGGCCCAGGAATCTGCATTAAAGATGTCTGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCTGAAGGGCCCAGGAATCTGCATTAAAGATGTCTGTAGT  50

seq1  CTGGGGCTAGAGAGATGGCTCAGTGGTTAAGAGCAACGACTGCTCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTAGAGAGATGGCTCAGTGGTTAAGAGCAACGACTGCTCTTCTG  100

seq1  GAAGACCCAGTTTCGATTCCCAGCACCCACACTGTGGCTCACAACTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCAGTTTCGATTCCCAGCACCCACACTGTGGCTCACAACTATCT  150

seq1  GTAGCTACAGTTCCAGAGGATCTGATACCTTCGCAGAGACAAACATGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTACAGTTCCAGAGGATCTGATACCTTCGCAGAGACAAACATGCAT  200

seq1  GCAAAACACCAATGCACATCAAATAAAAATAAGTCATTAATATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACACCAATGCACATCAAATAAAAATAAGTCATTAATATATATATA  250

seq1  AAGTGTATGTATGTCTGGGGTCTTATCTAGGGGAACCTTATGCAGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATGTATGTCTGGGGTCTTATCTAGGGGAACCTTATGCAGATGGA  300

seq1  TAGCGCACAGACAGAAAATGTGAAACATCTTAATACTAGAGATGCTGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGCACAGACAGAAAATGTGAAACATCTTAATACTAGAGATGCTGCCC  350

seq1  TCAAGACCTTCTCTGTGTGCCTTTCTCATACTGTTGACAAAAATGGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACCTTCTCTGTGTGCCTTTCTCATACTGTTGACAAAAATGGGGCC  400

seq1  AGACCTACCAGCAGCCAGGGGCTGGAAATGCCCACTGCCCGTGGTTCCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTACCAGCAGCCAGGGGCTGGAAATGCCCACTGCCCGTGGTTCCGT  450

seq1  CTTTGAAGAATGAAGCTAACGATAATCCAGAGACCTAGGTGCAAGGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAATGAAGCTAACGATAATCCAGAGACCTAGGTGCAAGGGGAA  500

seq1  GATGCTCACCGCAGCAGCAACAGGATACGGGGTGTGTGGTGTGCACAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCACCGCAGCAGCAACAGGATACGGGGTGTGTGGTGTGCACAGTG  550

seq1  GGCTTACAGGATAGAGATGTGTAGTGTGCACAGTGAGCCTACCAGGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACAGGATAGAGATGTGTAGTGTGCACAGTGAGCCTACCAGGTCAG  600

seq1  GCAGAGTGTATGCTCGGGTGCCAGCACACGTGTGTGACTCAAAGAGGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGTATGCTCGGGTGCCAGCACACGTGTGTGACTCAAAGAGGGGT  650

seq1  TCTATTCCTCTCTGTCTTGGGCAGCCCAAAACTGGCATTGAGATGATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCTCTCTGTCTTGGGCAGCCCAAAACTGGCATTGAGATGATTGA  700

seq1  CAGTTCAGAGCAACAAGGCTGGGAGAGGACAAGGTGGGGTGGAGGGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGAGCAACAAGGCTGGGAGAGGACAAGGTGGGGTGGAGGGAGGC  750

seq1  TCCAGGCACCCAAGGAAGCTATACCCACCTGTACAATAGGGTTGTGTAGG  800
      ||||||||||||||| |||||||||||||||||| |||||||||||| ||
seq2  TCCAGGCACCCAAGGTAGCTATACCCACCTGTAC-ATAGGGTTGTGT-GG  798

seq1  CTC-TTCTGAACTGGGCCGGGACTG-TCGCCCTATAGCCAAAGGAGAAGA  848
       || ||||||||||||||||||||| ||||||| |||||||| |||||||
seq2  TTCTTTCTGAACTGGGCCGGGACTGTTCGCCCTTTAGCCAAA-GAGAAGA  847

seq1  AGA-TGAAGCAGCAGACACAGGACACACG  876
      ||| ||| ||| |  ||||||||||||||
seq2  AGATTGATGCATC-TACACAGGACACACG  875

seq1: chr4_141858287_141858929
seq2: B6Ng01-016P19.g_71_715 (reverse)

seq1  ACAGA-GGAAACC-CCCCAACCTACAGGGATCTGCTGGGCGACCTGAGAC  48
      |||||  |||||| |||||||| |||||||||||||||||||||||||||
seq2  ACAGATAGAAACCACCCCAACCCACAGGGATCTGCTGGGCGACCTGAGAC  50

seq1  ACTCGTCCTGTGGTTGTCAGAGGAGGAGTCCATGGACAGACTCAGTGGAG  98
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTTGTGGTTGTCAGAGGAGGAGTCCATGGACAGACTCAGTGGAG  100

seq1  ATGTGTCTGAGTCTCTCTTCTACACAGCTTCAGTTTCTGCATCTATGTGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTGAGTCTCTCTTCTACACAGCTTCAGTTTCTGCATCTATGTGA  150

seq1  AAGAAAGCCCACTCTGCAGAGGCCAGATAAGGAATGCGGAAGTGTTTTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCCCACTCTGCAGAGGCCAGATAAGGAATGCGGAAGTGTTTTCT  200

seq1  CAGGGAGTAGAGGCAGCAGTCTACTATTCTCTGCTGGCAGCCCTGCAGGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTAGAGGCAGCAGTCTACTATTCTCTGCTGGCAGCCCTGCAGGC  250

seq1  AAGTCAGCAATAGGAGACTGGGACAAACATCCTTCCAGCAAGAAGGATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGCAATAGGAGACTGGGACAAACATCCTTCCAGCAAGAAGGATGC  300

seq1  TGCCTTGTCAGAGGCTCTGTACCTTATCAGATATTGAAATCCAGGCCAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTCAGAGGCTCTGTACCTTATCAGATATTGAAATCCAGGCCAGC  350

seq1  CCCAGCCAGAGGTACAACTCTGCCCCAGCATCAGCAACAGCACCAACTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCAGAGGTACAACTCTGCCCCAGCATCAGCAACAGCACCAACTGC  400

seq1  CTTCCCTCTTTTAAACCTGTTCCTCCCCCACCCCTGCCCCCAGCTTCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCTTTTAAACCTGTTCCTCCCCCACCCCTGCCCCCAGCTTCTGG  450

seq1  AGTGCCTCCAGAAACCATTGTTAAAGACAGAGGACTGCACCTGACCCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTCCAGAAACCATTGTTAAAGACAGAGGACTGCACCTGACCCCTG  500

seq1  GGAGGCCGCTGGGTGGATTTGCATCTCAGCCACCTAACCCACTCATTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCGCTGGGTGGATTTGCATCTCAGCCACCTAACCCACTCATTTCT  550

seq1  CTTTTTTGAGGCTCAGGTCCTCCCTGGTAAACACATGTGTATATGTCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGAGGCTCAGGTCCTCCCTGGTAAACACATGTGTATATGTCACC  600

seq1  AGCACTGGGGTCTACCAGAGCAGGTTAAAGCTTGGATTTGAATTC  643
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGGGGTCTACCAGAGCAGGTTAAAGCTTGGATTTGAATTC  645