BAC Information

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BAC

Clone NameB6Ng01-018C11
Chromosome4 (Build37)
Map Location 92,879,066 - 92,880,210
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269
Downstream geneLOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018C11.bB6Ng01-018C11.g
ACCDH851635DH851636
length9691,128
definitionDH851635|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C11, 5' end.DH851636|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatgttcaatgagctgtgtggatgttgttctaagcaataggg
caccactgtccatttgcagaggacaaccttttgtctttagtatcagcctg
agttgtttggaggatttctatggggcatcctttgaaaactgtatgaaacc
ctgtcgaggtactggaaaccttgccaggttacaagagttagccaattgag
actccatatctagaagtctatgttaagatccctgcatctctgggatgagc
catacttgatcatgatggatgttgtttttgatctgttcttggattcagta
ttcaaatattttattgagtatttttgcataaatgttcatgaagaaaattg
ggctgtaattctctttgttgagtgtttgtgtggtttgggtatcaggtaac
tgttgcctcataaaatgaatttgaaaatgtttctttattctactttgtga
aataattttgggcgtattggcaggaatattttgaaaatctagtagaattt
caccctaaaactatttgaccctggattttctttggttgggaaacctttaa
tgactgcttctatttcactaggattataggtctatttaagtttcttatct
gatcttgatttaactttgataagtgatacctgtcaataaaattattattt
attattttttgtttatttttttagaatttcaaatttggtggagtataggt
ttgtaaaaattttcatatggttctctggatttcctacatgtctgctgtta
tatacactttttcttttctgatttagttagttaagatattctctctctgt
cttttatttgtttaaataaaggtttttctatgttgctgatttctcagaga
agcaactattttatttcaacaattctttgtactgtgtactttgtttcatt
ttatgattttgtccttaatttgactattcttgccttccattctctgggtg
actacttccttttgttaaa

gaattcaattagaataaaacaggagttatagatgcagatatactgggcag
aaaatatactgattcttcactgttctcaatggccaactagatagttgtat
ttaagtaaatacatgtttgagaataaatgcaggcattttagaaaataaga
ataataaacttggaattgttagaagtatagaatatattttccaaattttt
tgtttggctctggtaagcctttggatttcatgtataccttgccttgaaag
tgctgtttatcaagtcatcaaaagaaagtttgttttagggcacctaaagc
actatctacagaacttaaatccttatatgtatgacaccagataatttgta
catcacctatgcccaacttctagtgtcacaaggcatttcagagtttctta
aactgcccatcgcatgaatggactgttgaaacattagctgcctaggattt
ttaacaaggtaataaagactgtaacagatttagtgcaaatataagtaatt
ttcctgaacatacttgatgcatggttagtgagcatcttagagactgagga
ccatcatgaagagaagccatcaggaggtttctttgaatgctgacaatgaa
acaaagatgcacacaatataattgttcttggcggaggaacacaaatgaag
taaatggaatgaaatacagtaataagtacaagtacatgtgacactaatac
atattcttaaacaatgaaggcattgtacagagtaatacctacattgtgac
cattcatgagaagcaaacaatactattcatcaaatgcaaacaagtgaata
atctgttaaaagtttcccaggagaaggtccacattactacatttcagaat
aagtatgctaagactttctgaggaaggcataaatatatgagtttttgcca
tgtttcagaaaatttggaaaagatgacttttgtttggtgaaagatgtagg
atgttactgtttgctctacattcctattttgtaattatagaaagtgtttt
agccaatcattcaggtgatatgataagccagacttgtcaagatgattttt
tcagcatcattattgtcaatatttaggacatttactcatttaaatcagtg
gataactgtttgcctctttaagtcgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92879066_92880210
seq2: B6Ng01-018C11.g_68_1195 (reverse)

seq1  ATTCTGACTTAAAAAGAGCAAACAGTATATCAACTGATATTTAAAATGAG  50
      |||| |||||||| || ||||||||| |||| |||||   || |||||||
seq2  ATTC-GACTTAAAGAG-GCAAACAGT-TATCCACTGA---TTTAAATGAG  44

seq1  TAAAATTGTCCTAAATATTGACATAAATTGATTGCTGAAAAAAATTCATC  100
      ||||  ||||||||||||||||| | | ||| |||||||||||  |||||
seq2  TAAA--TGTCCTAAATATTGACA-ATAATGA-TGCTGAAAAAA--TCATC  88

seq1  TTGAC-AGTCTTGGCTTATCATATCACCTGAATGATTGGCTAAAACACTT  149
      ||||| |||| ||||||||||||||||||||||||||||||||||||| |
seq2  TTGACAAGTC-TGGCTTATCATATCACCTGAATGATTGGCTAAAACAC-T  136

seq1  TTCTATAATTACAAAATAGGAATGTAGAGGCAAACAGTTAACATCCTACA  199
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  TTCTATAATTACAAAATAGGAATGTAGA-GCAAACAG-TAACATCCTACA  184

seq1  TCTTTCACCATATCAAAAGTCATCTTTTTCCAAATTTTCTGAAACATGGC  249
      |||||||||| | ||||||||||| |||||||||||||||||||||||||
seq2  TCTTTCACCA-AACAAAAGTCATC-TTTTCCAAATTTTCTGAAACATGGC  232

seq1  AAAAACTCATATATTTATGCCTTCCTCAGAAAGTCTTAGCATACTTATTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCATATATTTATGCCTTCCTCAGAAAGTCTTAGCATACTTATTC  282

seq1  TGAAATGTAGTAATGTGGACCTTCTCCTGGGAAACTTTTAACAGATTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTAGTAATGTGGACCTTCTCCTGGGAAACTTTTAACAGATTATT  332

seq1  CACTTGTTTGCATTTGATGAATAGTATTGTTTGCTTCTCATGAATGGTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTTGCATTTGATGAATAGTATTGTTTGCTTCTCATGAATGGTCA  382

seq1  CAATGTAGGTATTACTCTGTACAATGCCTTCATTGTTTAAGAATATGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAGGTATTACTCTGTACAATGCCTTCATTGTTTAAGAATATGTAT  432

seq1  TAGTGTCACATGTACTTGTACTTATTACTGTATTTCATTCCATTTACTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCACATGTACTTGTACTTATTACTGTATTTCATTCCATTTACTTC  482

seq1  ATTTGTGTTCCTCCGCCAAGAACAATTATATTGTGTGCATCTTTGTTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTCCTCCGCCAAGAACAATTATATTGTGTGCATCTTTGTTTCA  532

seq1  TTGTCAGCATTCAAAGAAACCTCCTGATGGCTTCTCTTCATGATGGTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGCATTCAAAGAAACCTCCTGATGGCTTCTCTTCATGATGGTCCT  582

seq1  CAGTCTCTAAGATGCTCACTAACCATGCATCAAGTATGTTCAGGAAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTAAGATGCTCACTAACCATGCATCAAGTATGTTCAGGAAAATT  632

seq1  ACTTATATTTGCACTAAATCTGTTACAGTCTTTATTACCTTGTTAAAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATTTGCACTAAATCTGTTACAGTCTTTATTACCTTGTTAAAAAT  682

seq1  CCTAGGCAGCTAATGTTTCAACAGTCCATTCATGCGATGGGCAGTTTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCAGCTAATGTTTCAACAGTCCATTCATGCGATGGGCAGTTTAAG  732

seq1  AAACTCTGAAATGCCTTGTGACACTAGAAGTTGGGCATAGGTGATGTACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGAAATGCCTTGTGACACTAGAAGTTGGGCATAGGTGATGTACA  782

seq1  AATTATCTGGTGTCATACATATAAGGATTTAAGTTCTGTAGATAGTGCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGGTGTCATACATATAAGGATTTAAGTTCTGTAGATAGTGCTT  832

seq1  TAGGTGCCCTAAAACAAACTTTCTTTTGATGACTTGATAAACAGCACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCCCTAAAACAAACTTTCTTTTGATGACTTGATAAACAGCACTTT  882

seq1  CAAGGCAAGGTATACATGAAATCCAAAGGCTTACCAGAGCCAAACAAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAGGTATACATGAAATCCAAAGGCTTACCAGAGCCAAACAAAAA  932

seq1  ATTTGGAAAATATATTCTATACTTCTAACAATTCCAAGTTTATTATTCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAAATATATTCTATACTTCTAACAATTCCAAGTTTATTATTCTT  982

seq1  ATTTTCTAAAATGCCTGCATTTATTCTCAAACATGTATTTACTTAAATAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAAATGCCTGCATTTATTCTCAAACATGTATTTACTTAAATAC  1032

seq1  AACTATCTAGTTGGCCATTGAGAACAGTGAAGAATCAGTATATTTTCTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTAGTTGGCCATTGAGAACAGTGAAGAATCAGTATATTTTCTGC  1082

seq1  CCAGTATATCTGCATCTATAACTCCTGTTTTATTCTAATTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATATCTGCATCTATAACTCCTGTTTTATTCTAATTGAATTC  1128


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