BAC Information

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BAC

Clone NameB6Ng01-018D15
Chromosome4 (Build37)
Map Location 70,279,816 - 70,425,133
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979, LOC667638
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D15.bB6Ng01-018D15.g
ACCDH851689DH851690
length2941,110
definitionDH851689|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D15, 5' end.DH851690|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,424,841 - 70,425,133)(70,279,816 - 70,280,941)
sequence
gaattcaaacattttgtatcttccttcactcttcgtcacacaatttctac
tacaatagcctatcaatactttcttcaagtccttactgtgctcttcatag
acattccatgaagtctaacagccactgttagactcagcagaaccgcagcc
tatatttcactctaataaatattgtgtgtgtgtatgcgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgcgtgcgtgttcttttagagaattctagcta
aaatattatagctgttatacattattcattcataaatgcagaat
gaattccagaaaggtttggtctacatagtgagtttctagccagccagggc
tgcacaatgaggccctgtctaaaaaacaacacacaaaacaaaaaagaagg
agataaggaagaggagggaggctccttgctcccacagtgagagttacatc
tgtccaggagaccatgtttagctcacatgactcttttttgattgtttaat
gctgccaccacatcttgtttttatagtgtttcttcatccatgtggaagga
atatgctaccaaaatgagtgaaatctccagccaccacacctacttcttgt
tttatgtttcattacaactttctatcatagaacattttaaatttcccttt
atttcttcagggagaaaatctttaaggatggaagaatctgctcagtggtt
aagagaacttgctgttcttatcgaggacaagggttcaagtgcccagcact
tacagggtggtatagcgctggatggggatatcatgtctcagtacaaacca
caaaaccaaatataaaacaaccaagggcatagtggtgtacatctattctc
tcaacacttcagaggtgaaggcaggaggattaggaatttgagatcagcct
aagctacatctcaagttctaagcaagacaaggctacaaccttgtctcaaa
agcaagcaagcaagcaaacagaaaaccatatcaattatcatttactaaag
cagaaaagggaaaatagaaggaaaaatgtcatgttccttcagaagaaaaa
aaaattgccaaggatctcttcataacactgctccaattgtgcagtctcta
gctggctgatggataggagttgggttctgcttcccacaccaacaactcca
aaccacagaagaaactggatgacaaagctggaggatagtaaggttaagac
ccatacctttgaacagaatccacctttgacaagtatcaaatgtcttgagt
cttttttctgactcagagagttgatagtcttatttatagacatggggtcc
taaactggcacatctgccttctatgacacccacccctgttcttctgttag
caccgtcaaagcatgtgggcatccaacacctgctaagcatgtattgtaaa
cagagaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70424841_70425133
seq2: B6Ng01-018D15.b_41_333 (reverse)

seq1  TTCTGCATTTATGTATGGATAATGTATAACAGCTATACTATATTAGCTAG  50
      ||||||||||||| ||| ||||||||||||||||||| ||| ||||||||
seq2  TTCTGCATTTATGAATGAATAATGTATAACAGCTATAATATTTTAGCTAG  50

seq1  AATTCTCTAGAGGAACAGGAATGAACACACACACACACACACACACACAC  100
      ||||||||| | ||||| | | | ||||||||||||||||||||||||||
seq2  AATTCTCTAAAAGAACACGCACGCACACACACACACACACACACACACAC  100

seq1  ACACACGCATACACACACACAATATTTATTAGAGTGAAATATAGGCTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGCATACACACACACAATATTTATTAGAGTGAAATATAGGCTGCG  150

seq1  GTTCTGCTGAGTCTAACAGTGGCTGTTAGACTTCATGGAATGTCTATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCTGAGTCTAACAGTGGCTGTTAGACTTCATGGAATGTCTATGAA  200

seq1  GAGCACAGTAAGGACTTGAAGAAAGTATTGATAGGCTATTGTAGTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGTAAGGACTTGAAGAAAGTATTGATAGGCTATTGTAGTAGAAA  250

seq1  TTGTGTGACGAAGAGTGAAGGAAGATACAAAATGTTTGAATTC  293
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGACGAAGAGTGAAGGAAGATACAAAATGTTTGAATTC  293

seq1: chr4_70279816_70280941
seq2: B6Ng01-018D15.g_67_1176

seq1  GAATTCCAGAAAGGTTTGGTCTACATAGTGAGTTTCTAGCCAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGGTTTGGTCTACATAGTGAGTTTCTAGCCAGCCAGGGC  50

seq1  TGCACAATGAGGCCCTGTCTAAAAAACAACACACAAAACAAAAAAGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATGAGGCCCTGTCTAAAAAACAACACACAAAACAAAAAAGAAGG  100

seq1  AGATAAGGAAGAGGAGGGAGGCTCCTTGCTCCCACAGTGAGAGTTACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGGAAGAGGAGGGAGGCTCCTTGCTCCCACAGTGAGAGTTACATC  150

seq1  TGTCCAGGAGACCATGTTTAGCTCACATGACTCTTTTTTGATTGTTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGAGACCATGTTTAGCTCACATGACTCTTTTTTGATTGTTTAAT  200

seq1  GCTGCCACCACATCTTGTTTTTATAGTGTTTCTTCATCCATGTGGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCACCACATCTTGTTTTTATAGTGTTTCTTCATCCATGTGGAAGGA  250

seq1  ATATGCTACCAAAATGAGTGAAATCTCCAGCCACCACACCTACTTCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTACCAAAATGAGTGAAATCTCCAGCCACCACACCTACTTCTTGT  300

seq1  TTTATGTTTCATTACAACTTTCTATCATAGAACATTTTAAATTTCCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTCATTACAACTTTCTATCATAGAACATTTTAAATTTCCCTTT  350

seq1  ATTTCTTCAGGGAGAAAATCTTTAAGGATGGAAGAATCTGCTCAGTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCAGGGAGAAAATCTTTAAGGATGGAAGAATCTGCTCAGTGGTT  400

seq1  AAGAGAACTTGCTGTTCTTATCGAGGACAAGGGTTCAAGTGCCCAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACTTGCTGTTCTTATCGAGGACAAGGGTTCAAGTGCCCAGCACT  450

seq1  TACAGGGTGGTATAGCGCTGGATGGGGATATCATGTCTCAGTACAAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTGGTATAGCGCTGGATGGGGATATCATGTCTCAGTACAAACCA  500

seq1  CAAAACCAAATATAAAACAACCAAGGGCATAGTGGTGTACATCTATTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAAATATAAAACAACCAAGGGCATAGTGGTGTACATCTATTCTC  550

seq1  TCAACACTTCAGAGGTGAAGGCAGGAGGATTAGGAATTTGAGATCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTTCAGAGGTGAAGGCAGGAGGATTAGGAATTTGAGATCAGCCT  600

seq1  AAGCTACATCTCAAGTTCTAAGCAAGACAAGGCTACAACCTTGTCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACATCTCAAGTTCTAAGCAAGACAAGGCTACAACCTTGTCTCAAA  650

seq1  AGCAAGCAAGCAAGCAAACAGAAAACCATATCAATTATCATTTACTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAAGCAAGCAAACAGAAAACCATATCAATTATCATTTACTAAAG  700

seq1  CAGAAAAGGGAAAATAGAAGGAAAAATGTCATGTTCCTTCAGAAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGGGAAAATAGAAGGAAAAATGTCATGTTCCTTCAGAAGAAAAA  750

seq1  AAAATTGCCAAGGATCTCTTCATAACACTGCTCCAATTGTGCAGTCTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCCAAGGATCTCTTCATAACACTGCTCCAATTGTGCAGTCTCTA  800

seq1  GCTGGCTGATGGATAGGAGTTGGGTTCTGCTTCCCCACACCAACAACTCC  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTGGCTGATGGATAGGAGTTGGGTTCTGCTT-CCCACACCAACAACTCC  849

seq1  AAAACCACAGAAGAAACTGGATGACAAAGCTGGAGGATAGTAAGGTTAAG  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAACCACAGAAGAAACTGGATGACAAAGCTGGAGGATAGTAAGGTTAAG  898

seq1  ACCCATACCTTTGAACAGAATCCACCTTTGACAAGTATCAAATGTCTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATACCTTTGAACAGAATCCACCTTTGACAAGTATCAAATGTCTTGA  948

seq1  GTTCTTTTTTTCTGAACATCAGAGAGTTGATAGTCTTATTTATAGACAGT  1000
      ||   ||||||||||   |||||||||||||||||||||||||||||| |
seq2  GT--CTTTTTTCTGA--CTCAGAGAGTTGATAGTCTTATTTATAGACA-T  993

seq1  GGGGTCCTAAAACTGGCACCATCTGGCTTCTGATGACACCCACTCCTGTT  1050
      |||||||| ||||||||| |||||| ||||| ||||||||||| ||||||
seq2  GGGGTCCT-AAACTGGCA-CATCTGCCTTCT-ATGACACCCACCCCTGTT  1040

seq1  CTTCTGTTAGCACCGTAGAAGCAGTGTGGGCATCCAAACACCTGCTAAGC  1100
      ||||||||||||||||  ||||| ||||||||||| ||||||||||||||
seq2  CTTCTGTTAGCACCGTCAAAGCA-TGTGGGCATCC-AACACCTGCTAAGC  1088

seq1  AATGTAATTGTAAAACAAGAGAAATT  1126
       |||| ||||||||   |||||||||
seq2  -ATGT-ATTGTAAA--CAGAGAAATT  1110