BAC Information

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BAC

Clone NameB6Ng01-018O08
Chromosome4 (Build37)
Map Location 56,913,526 - 57,080,004
singlet/doubletdoublet
Overlap geneD730040F13Rik, 6430704M03Rik, Epb4.1l4b
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1
Downstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018O08.bB6Ng01-018O08.g
ACCDH852160DH852161
length7211,196
definitionDH852160|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O08, 5' end.DH852161|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,079,287 - 57,080,004)(56,913,526 - 56,914,732)
sequence
gaattcagctctttgtgttaaaaccatgtggccggcattactagaataac
caccttctcctaacacacttgagtaggaatttggcatctgtagacttcag
agatcctaaggtgactctggatggatggtatgtgccttgcttctcagatg
gtcatttgtttctgcttaaaggtgactcctaacttggagtcctatattag
tctcccccacccccaccccattgctgtgacaaaatacccagtactgtcta
ctctataaagtaaaataagttcatttaattcatagctctggaggttcaag
agtagtgctggtctccgctcagctctggtaagggatttgtggtgtaagaa
caggagtgtatgtggaaggagagattacatggtgagatggggagccagta
cacaagggtccaggagaactaaccagggtccctctgaagacccctaaaga
ctcaatcacctcgctgttgggtggccagcccttgcaggagagagaataaa
aataagaaagtaaaaacagccccacctgccgtgaccccgccctcttctgc
ctccccttgcatttgctcccagtgaccatccagggctgtgcttgttcatg
gcagatctgcgggcactctaggcatggatctctccacagggttgctagga
gaccctgtacttggccagtctttagcgtccctgtggtcgacccatcatat
tttgggctataagtggactgg
gaattcaacaggcaggcttcatttacaaaaactccttacaaaaaaatctt
gaaaatgcttcactgtgcctacaaaaatatgcaccattaactgtttgacc
ttgtgggataaagaatgaatgaacaaagccaccaattctaagagacaatg
cctgtatttgtaatttggcaagcatacttttggggccccagtcactctgg
aatttttaatcaaaaaatttacatagtttctaagtcacacaaatagaaaa
ctcttaagaaattaccagaatacagcaattgtagactgggagtctccaac
aacaaccaagtaaccctttttacttgaaaagagatcaactagagacaaca
cagaggacagtgctggaatgttcactcaatcatcaaagtagagtttgagt
ttaatcagcaggcttagaaaggagggattagcaaaggcgggatcaggaag
aaagcccatgaaattcaaaaacgcaaccgatttgtagaggtaaaactgca
tcccaactcaaaaatggcaaacatgagctgggctggcattaatttattca
atagtggcaacataaccaaaagatgcctcaaacagagtccccggccatga
aatgtaagcccagaggagactcacaagcagctaagcaacttggtcacaga
gggcagggcagttagaacgaacaagcggcctcagcatcctcctgcttcgc
tgcttccctcccgagtccaccaccatccaacctccctctgagtgtcattc
tacagaacccaggaagcacaaaaacagaacactgcaaggattcaggggtc
aaaatatgaacagaactcttttccgacaaagatggggttaccttcctgtc
agactaggagcccagagactggctataagctccactgagccttttctggt
tccttttcctgctctagccttataggaaatgaactgcacaaggaagtctc
atatgccacttcagctctgccactgctctttaaagtataaaaataataag
agaagctattatgtgcctccttgttttagtttagttgacaatctacacca
gctttattctaattagtaataaagacttaaatctagtcagaaataaggag
aattgctcagcagttagaagcacttgttgctcttacacaggaaccagaat
tcgttctagcacctcaataagggctcggaacctctgttatctcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57079287_57080004
seq2: B6Ng01-018O08.b_44_764 (reverse)

seq1  CCAGTCCACTTATAG-CCAAACTCTGATGGGACGA-CACAGGGACGCT-A  47
      ||||||||||||||| ||||| | ||||||| ||| |||||||||||| |
seq2  CCAGTCCACTTATAGCCCAAAATATGATGGGTCGACCACAGGGACGCTAA  50

seq1  AGACTGGCCAAGTACAGGGTCTCCTAGCAACCCTGTGGAGAGATCCATGC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGCCAAGTACAGGGTCTCCTAGCAACCCTGTGGAGAGATCCATGC  100

seq1  CTAGAGTGCCCGCAGATCTGCCATGAACAAGCACAGCCCTGGATGGTCAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTGCCCGCAGATCTGCCATGAACAAGCACAGCCCTGGATGGTCAC  150

seq1  TGGGAGCAAATGCAAGGGGAGGCAGAAGAGGGCGGGGTCACGGCAGGTGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCAAATGCAAGGGGAGGCAGAAGAGGGCGGGGTCACGGCAGGTGG  200

seq1  GGCTGTTTTTACTTTCTTATTTTTATTCTCTCTCCTGCAAGGGCTGGCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTTTACTTTCTTATTTTTATTCTCTCTCCTGCAAGGGCTGGCCA  250

seq1  CCCAACAGCGAGGTGATTGAGTCTTTAGGGGTCTTCAGAGGGACCCTGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGCGAGGTGATTGAGTCTTTAGGGGTCTTCAGAGGGACCCTGGT  300

seq1  TAGTTCTCCTGGACCCTTGTGTACTGGCTCCCCATCTCACCATGTAATCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCCTGGACCCTTGTGTACTGGCTCCCCATCTCACCATGTAATCT  350

seq1  CTCCTTCCACATACACTCCTGTTCTTACACCACAAATCCCTTACCAGAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCACATACACTCCTGTTCTTACACCACAAATCCCTTACCAGAGC  400

seq1  TGAGCGGAGACCAGCACTACTCTTGAACCTCCAGAGCTATGAATTAAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGGAGACCAGCACTACTCTTGAACCTCCAGAGCTATGAATTAAATG  450

seq1  AACTTATTTTACTTTATAGAGTAGACAGTACTGGGTATTTTGTCACAGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATTTTACTTTATAGAGTAGACAGTACTGGGTATTTTGTCACAGCA  500

seq1  ATGGGGTGGGGGTGGGGGAGACTAATATAGGACTCCAAGTTAGGAGTCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTGGGGGTGGGGGAGACTAATATAGGACTCCAAGTTAGGAGTCAC  550

seq1  CTTTAAGCAGAAACAAATGACCATCTGAGAAGCAAGGCACATACCATCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGCAGAAACAAATGACCATCTGAGAAGCAAGGCACATACCATCCA  600

seq1  TCCAGAGTCACCTTAGGATCTCTGAAGTCTACAGATGCCAAATTCCTACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTCACCTTAGGATCTCTGAAGTCTACAGATGCCAAATTCCTACT  650

seq1  CAAGTGTGTTAGGAGAAGGTGGTTATTCTAGTAATGCCGGCCACATGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTGTTAGGAGAAGGTGGTTATTCTAGTAATGCCGGCCACATGGTT  700

seq1  TTAACACAAAGAGCTGAATTC  718
      |||||||||||||||||||||
seq2  TTAACACAAAGAGCTGAATTC  721

seq1: chr4_56913526_56914732
seq2: B6Ng01-018O08.g_69_1264

seq1  GAATTCAACAGGCAGGCTTCATTTACAAAAACTCCTTACAAAAAAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGCAGGCTTCATTTACAAAAACTCCTTACAAAAAAATCTT  50

seq1  GAAAATGCTTCACTGTGCCTACAAAAATATGCACCATTAACTGTTTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCTTCACTGTGCCTACAAAAATATGCACCATTAACTGTTTGACC  100

seq1  TTGTGGGATAAAGAATGAATGAACAAAGCCACCAATTCTAAGAGACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGATAAAGAATGAATGAACAAAGCCACCAATTCTAAGAGACAATG  150

seq1  CCTGTATTTGTAATTTGGCAAGCATACTTTTGGGGCCCCAGTCACTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTTGTAATTTGGCAAGCATACTTTTGGGGCCCCAGTCACTCTGG  200

seq1  AATTTTTAATCAAAAAATTTACATAGTTTCTAAGTCACACAAATAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAATCAAAAAATTTACATAGTTTCTAAGTCACACAAATAGAAAA  250

seq1  CTCTTAAGAAATTACCAGAATACAGCAATTGTAGACTGGGAGTCTCCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGAAATTACCAGAATACAGCAATTGTAGACTGGGAGTCTCCAAC  300

seq1  AACAACCAAGTAACCCTTTTTACTTGAAAAGAGATCAACTAGAGACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCAAGTAACCCTTTTTACTTGAAAAGAGATCAACTAGAGACAACA  350

seq1  CAGAGGACAGTGCTGGAATGTTCACTCAATCATCAAAGTAGAGTTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACAGTGCTGGAATGTTCACTCAATCATCAAAGTAGAGTTTGAGT  400

seq1  TTAATCAGCAGGCTTAGAAAGGAGGGATTAGCAAAGGCGGGATCAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGCAGGCTTAGAAAGGAGGGATTAGCAAAGGCGGGATCAGGAAG  450

seq1  AAAGCCCATGAAATTCAAAAACGCAACCGATTTGTAGAGGTAAAACTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCATGAAATTCAAAAACGCAACCGATTTGTAGAGGTAAAACTGCA  500

seq1  TCCCAACTCAAAAATGGCAAACATGAGCTGGGCTGGCATTAATTTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTCAAAAATGGCAAACATGAGCTGGGCTGGCATTAATTTATTCA  550

seq1  ATAGTGGCAACATAACCAAAAGATGCCTCAAACAGAGTCCCCGGCCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGCAACATAACCAAAAGATGCCTCAAACAGAGTCCCCGGCCATGA  600

seq1  AATGTAAGCCCAGAGGAGACTCACAAGCAGCTAAGCAACTTGGTCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGCCCAGAGGAGACTCACAAGCAGCTAAGCAACTTGGTCACAGA  650

seq1  GGGCAGGGCAGTTAGAACGAACAAGCGGCCTCAGCATCCTCCTGCTTCGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGGCAGTTAGAACGAACAAGCGGCCTCAGCATCCTCCTGCTTCGC  700

seq1  TGCTTCCCTCCCGAGTCCACCACCATCCAACCTCCCTCTGAGTGTCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCTCCCGAGTCCACCACCATCCAACCTCCCTCTGAGTGTCATTC  750

seq1  TACAGAACCCAGGAAGCACAAAAACAGAACACTGCAAGGATTCAGGGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACCCAGGAAGCACAAAAACAGAACACTGCAAGGATTCAGGGGTC  800

seq1  AAAATATGAACAGAACTC-TTTCCGACAAAGATGGGGTTACCTTCCTGTC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAATATGAACAGAACTCTTTTCCGACAAAGATGGGGTTACCTTCCTGTC  850

seq1  AGACTAGGAGCCCAGAGACTGGCTATAAGCTCCACTGAGCC-TTTCTGGT  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGACTAGGAGCCCAGAGACTGGCTATAAGCTCCACTGAGCCTTTTCTGGT  900

seq1  TCCTTTTCCTGCTCTAGCCTTATAGGAAATGAACTGCACAAGGAAGTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCCTGCTCTAGCCTTATAGGAAATGAACTGCACAAGGAAGTCTC  950

seq1  AGTATGCCACTTCAGCTCTGCCACTGCTCTTTAAAGTATAAAAATAATAA  998
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  A-TATGCCACTTCAGCTCTGCCACTGCTCTTTAAAGTATAAAAATAAT-A  998

seq1  AGAGAAGCTATAATGTGCCTCCTTGTATTAGTTTAGTTGACAATCTAACA  1048
      ||||||||||| |||||||||||||| ||||||||||||||||||| |||
seq2  AGAGAAGCTATTATGTGCCTCCTTGTTTTAGTTTAGTTGACAATCT-ACA  1047

seq1  CCAGGCTCTATTCTAAAGTAGTAATAAAGAACTTAAAATCTAGTCAGGGA  1098
      ||| ||| |||||| || ||||||||||| |||| ||||||||||| | |
seq2  CCA-GCTTTATTCT-AATTAGTAATAAAG-ACTT-AAATCTAGTCA-GAA  1092

seq1  ATATGGAGAAATGGCTCAGCAGTTAAGAGCACTGGCTGCTCTTACACAGG  1148
      ||| |||| ||| ||||||||||||  |||||| | ||||||||||||||
seq2  ATAAGGAG-AATTGCTCAGCAGTTAGAAGCACTTGTTGCTCTTACACAGG  1141

seq1  ACCCAGATTCCGTTCATAGCATCCACATAGTGGGCTCGGAACCATCTGTT  1198
      | ||||| | ||||| ||||| || ||    |||||||||||| ||||||
seq2  AACCAGAATTCGTTC-TAGCA-CCTCAATAAGGGCTCGGAACC-TCTGTT  1188

seq1  ATCTACAAT  1207
      |||| ||||
seq2  ATCT-CAAT  1196