BAC Information

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BAC

Clone NameB6Ng01-020E09
Chromosome4 (Build37)
Map Location 24,558,777 - 24,559,812
singlet/doubletsinglet
Overlap geneKlhl32
Upstream geneLOC100040464, LOC623873, LOC664973, F730047E07Rik
Downstream gene1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020E09.bB6Ng01-020E09.g
ACCDH853119DH853120
length1,0131,032
definitionDH853119|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E09, 5' end.DH853120|Mus musculus domesticus DNA, BAC clone: B6Ng01-020E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgatttcttcctctattgtaattgaaattttggctgggtata
atagcctgggctggcatttgtgtgctcttagtgtctgtataacatatgtc
caggatcttttggttttcatagtttctggtgaaacatctggtgtaattct
gataggcctgatttatatgttacttgaccttttacccttactcattttaa
tattctatctttatttagtgcattttttgttctgattattatgtgtcagg
aggaatttcttttctggtccagtctatttggagttctgtaggcttcttgt
atgttcatgggcatatctttctttaggtttgggaagttttcttctataat
tttgtggaagatatttgctggtcctttaagttgaaaatcttcattctcat
ctcctcctcttatctgtaggtttggtcttctcattgtgtcctggatttcc
tggatgttttgagttaggatctttttgctttttgcattttctttgattgt
tgtgctgatgttctctatggaatcttctgcacctgagattctctcttcca
tctcttgtattctgttgatgatgcttgcatctatggttccatatttcttt
cctagggtttctatctctagcgttgcctcactttcggttttttttttatt
gtgtctacttcccttttaggtctagaatggttttgttcaattccatcacc
tgtttggatgtgttttcctgtttctttaaggacttctacctgtttgcttg
tgttttcctgtttttctttaaggacttgtaactctttagcagtgttctcc
tgtatttctttaagtgagttattaaagtccttcttgatgtcctctaccat
catcatgagatatgcttttaaatctgggtctagcttttcgggtgtgtggg
gtgcacaggactgggcgagggggagtcctgcttctgatatggatgtggtc
ttgggttctgtagaaaatctaagttgcctttcccccctggtaatctcgga
gtagttgttttat
gaattctttaaaaagagcatgtgtgtacaaacatgaaacagaactcattt
caccagtgttaatgcagtcttcctccttaaccatgtgtgcaccgaactca
ggcttctgcaattagtgatctctcatgagacagctgacccatgaacatcc
aatctctgcaatctatggctcctaataatatcaggagacacacttataaa
aggagaaatgccttcctcagttaagtcattgttaaaacacacacacacac
acacacacacacacacacacacacacacacagcagaaacactggaaacac
tgtgcacatacttgtggtacccagcccagatgcaacctgccaaaggcaac
ctgttgtttcaaatcctaatattgcactaatggacagtaaacctgcaggt
cacgccatggtggaatactgtcacaatcaaacaggtcacgccatggtgga
atactgtcacaatccaagtcatggaaagggtgacaacatacagcagacat
ttgcattgtttgtagatatttggacagaaggaaaagaaaataaaagcatt
tcttcttcgaggggaaaagggaaattaaatcttcatcaaaaggacacaga
aaggacccagctgttagaggcacaccattcccagactttcatacacatac
catttgtgtttgtcctagacataggacaccattggctgtattaagtcaaa
tggcattatttgatttgagactaacaaggtcatagggatgtctcccaccc
caaatgggcatcccttacagaaggacatcgctacaatcaaaatcctctct
accatatgcaaagctctgtggcattacatgtagcatgaaactagagggcc
cgaagctgtgcaataccattgaggaactgaaggctttccccgcaaaatgc
tttcttttccccagtagctgaaagtgcatacagtggcactctgatgaaca
gttctgtggagatctttaaacgcatttaattacggtatggaattcctagg
aacgcctacctggttaggttctataccatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24558777_24559812
seq2: B6Ng01-020E09.g_67_1097

seq1  GAATTCTTTAAAAAGAGCATGTGTGTACAAACATGAAACAGAACTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAAGAGCATGTGTGTACAAACATGAAACAGAACTCATTT  50

seq1  CACCAGTGTTAATGCAGTCTTCCTCCTTAACCATGTGTGCACCGAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTGTTAATGCAGTCTTCCTCCTTAACCATGTGTGCACCGAACTCA  100

seq1  GGCTTCTGCAATTAGTGATCTCTCATGAGACAGCTGACCCATGAACATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGCAATTAGTGATCTCTCATGAGACAGCTGACCCATGAACATCC  150

seq1  AATCTCTGCAATCTATGGCTCCTAATAATATCAGGAGACACACTTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCAATCTATGGCTCCTAATAATATCAGGAGACACACTTATAAA  200

seq1  AGGAGAAATGCCTTCCTCAGTTAAGTCATTGTTAAAACACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATGCCTTCCTCAGTTAAGTCATTGTTAAAACACACACACACAC  250

seq1  ACACACACACACACACACACACACACACACAGCAGAAACACTGGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAGCAGAAACACTGGAAACAC  300

seq1  TGTGCACATACTTGTGGTACCCAGCCCAGATGCAACCTGCCAAAGGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACATACTTGTGGTACCCAGCCCAGATGCAACCTGCCAAAGGCAAC  350

seq1  CTGTTGTTTCAAATCCTAATATTGCACTAATGGACAGTAAACCTGCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTTCAAATCCTAATATTGCACTAATGGACAGTAAACCTGCAGGT  400

seq1  CACGCCATGGTGGAATACTGTCACAATCAAACAGGTCACGCCATGGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCATGGTGGAATACTGTCACAATCAAACAGGTCACGCCATGGTGGA  450

seq1  ATACTGTCACAATCCAAGTCATGGAAAGGGTGACAACATACAGCAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCACAATCCAAGTCATGGAAAGGGTGACAACATACAGCAGACAT  500

seq1  TTGCATTGTTTGTAGATATTTGGACAGAAGGAAAAGAAAATAAAAGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGTTTGTAGATATTTGGACAGAAGGAAAAGAAAATAAAAGCATT  550

seq1  TCTTCTTCGAGGGGAAAAGGGAAATTAAATCTTCATCAAAAGGACACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCGAGGGGAAAAGGGAAATTAAATCTTCATCAAAAGGACACAGA  600

seq1  AAGGACCCAGCTGTTAGAGGCACACCATTCCCAGACTTTCATACACATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCAGCTGTTAGAGGCACACCATTCCCAGACTTTCATACACATAC  650

seq1  CATTTGTGTTTGTCCTAGACATAGGACACCATTGGCTGTATTAAGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTTTGTCCTAGACATAGGACACCATTGGCTGTATTAAGTCAAA  700

seq1  TGGCATTATTTGATTTGAGACTAACAAGGTCATAGGGATGTCTCCCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTATTTGATTTGAGACTAACAAGGTCATAGGGATGTCTCCCACCC  750

seq1  CAAAT-GGCATCCCTTACAGAAGGACATCGCTACAATCAAAATCCTCTCT  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGGCATCCCTTACAGAAGGACATCGCTACAATCAAAATCCTCTCT  800

seq1  ACCATATGCAAAGCTCTGTGGCATTACATGTAGCATGAAACTAGAGGGGC  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCATATGCAAAGCTCTGTGGCATTACATGTAGCATGAAACTAGAGGGCC  850

seq1  CGAAGCTGTGCAATACCAATGAGGAACTGAAGGCTTTCCCCGCAAAATGC  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGAAGCTGTGCAATACCATTGAGGAACTGAAGGCTTTCCCCGCAAAATGC  900

seq1  TTTCTTTCCCCCAGGTAGCTGAAGGTGCATACAGTGGCACTCTGATGAAC  949
      ||||||| ||||| ||||||||| ||||||||||||||||||||||||||
seq2  TTTCTTTTCCCCA-GTAGCTGAAAGTGCATACAGTGGCACTCTGATGAAC  949

seq1  AGTTCCTGTGGAGATCTTTAAAACGCATTTTAATTACGGTAATGAATTCT  999
      |||| |||||||||||||| ||||||| |||||||||||||  |||||| 
seq2  AGTT-CTGTGGAGATCTTT-AAACGCA-TTTAATTACGGTATGGAATTCC  996

seq1  TAGGAACGCCTTACCTGGTTAGGTTCATATACCATCA  1036
      |||||||||| ||||||||||||||| ||||||||||
seq2  TAGGAACGCC-TACCTGGTTAGGTTC-TATACCATCA  1031