BAC Information

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BAC

Clone NameB6Ng01-020F23
Chromosome4 (Build37)
Map Location 152,694,632 - 152,695,642
singlet/doubletsinglet
Overlap genenone
Upstream geneRpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833, LOC100042089
Downstream geneAjap1, BC039966, A430005L14Rik, Dffb, BC046331, Lrrc47, 1190007F08Rik, Ccdc27, Trp73, Wdr8, 1200015A19Rik, Megf6, Arhgef16, Prdm16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F23.g
ACCDH853191
length1,009
definitionDH853191|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgagatgaatctcagatctttgctgttgctatacacaaccgag
ccattctatctttggtctcctcctttattagggtgcttgggggtcagcac
ccttctgaaccccaaggaaccccaaccttaggtggtcctccctctctctg
aaccctgaggataggcataggctctgtcccaggattggtagagtcgtctg
caaggcagagactaagagtgtggctgtcaatcctgggagggctcctccca
cactcttcatttctttgagtcacaccccagcccctgccctgtgggatgtg
gcctgacggatgcacatgacaggacaggcgaccccagcagggtctccaca
gagtcatgttcctgtcacgctaacgagggagagagaaatatgtatgcggc
ggaagccccgctaatggtgtctgtggatcagccgctgtaaatggacctgc
ttgtctctgcttattctatttactcaaaaaaaaaatcctccttaaaaaat
taagatttggagggaatttgtcaaaaggccattacctgcagacgttccac
tggccgcctctctgggcgcacttgtgcataattaatcagcagtgtggctc
tcacagtcccagcataaaagttaaaacccgttttaaggcgctctgtattt
tatgctcggcatcactgtcaggcaggtttcggggggagacaggtatttgt
atgtggtgccaagctggagttcccatagcaacaggctttctccttcctca
cgctgaactcctagaaatgagcttcatctgatcactcttgggctcaccta
aagcgttgtgggtaagagactgtgagtggctaccagagccttccaggaac
tgcggatgctccgttcccaggcctgtgttgtgtgtagatgtggccgtgtg
agctgctggccagtcccagcagcaacagtagcatgatacatcattacaac
caacatcaccactgtatcaccatctacgcccatgtgaccatcagcaacag
aaatatcac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_152694632_152695642
seq2: B6Ng01-020F23.g_65_1073

seq1  GAATTCTTGAGATGAATCTCAGATCTTTGCTGTTGCTATACACAACCGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGATGAATCTCAGATCTTTGCTGTTGCTATACACAACCGAG  50

seq1  CCATTCTATCTTTGGTCTCCTCCTTTATTAGGGTGCTTGGGGGTCAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTATCTTTGGTCTCCTCCTTTATTAGGGTGCTTGGGGGTCAGCAC  100

seq1  CCTTCTGAACCCCAAGGAACCCCAACCTTAGGTGGTCCTCCCTCTCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGAACCCCAAGGAACCCCAACCTTAGGTGGTCCTCCCTCTCTCTG  150

seq1  AACCCTGAGGATAGGCATAGGCTCTGTCCCAGGATTGGTAGAGTCGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAGGATAGGCATAGGCTCTGTCCCAGGATTGGTAGAGTCGTCTG  200

seq1  CAAGGCAGAGACTAAGAGTGTGGCTGTCAATCCTGGGAGGGCTCCTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGAGACTAAGAGTGTGGCTGTCAATCCTGGGAGGGCTCCTCCCA  250

seq1  CACTCTTCATTTCTTTGAGTCACACCCCAGCCCCTGCCCTGTGGGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCATTTCTTTGAGTCACACCCCAGCCCCTGCCCTGTGGGATGTG  300

seq1  GCCTGACGGATGCACATGACAGGACAGGCGACCCCAGCAGGGTCTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACGGATGCACATGACAGGACAGGCGACCCCAGCAGGGTCTCCACA  350

seq1  GAGTCATGTTCCTGTCACGCTAACGAGGGAGAGAGAAATATGTATGCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGTTCCTGTCACGCTAACGAGGGAGAGAGAAATATGTATGCGGC  400

seq1  GGAAGCCCCGCTAATGGTGTCTGTGGATCAGCCGCTGTAAATGGACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCCGCTAATGGTGTCTGTGGATCAGCCGCTGTAAATGGACCTGC  450

seq1  TTGTCTCTGCTTATTCTATTTACTCAAAAAAAAAATCCTCCTTAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGCTTATTCTATTTACTCAAAAAAAAAATCCTCCTTAAAAAAT  500

seq1  TAAGATTTGGAGGGAATTTGTCAAAAGGCCATTACCTGCAGACGTTCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTGGAGGGAATTTGTCAAAAGGCCATTACCTGCAGACGTTCCAC  550

seq1  TGGCCGCCTCTCTGGGCGCACTTGTGCATAATTAATCAGCAGTGTGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCCTCTCTGGGCGCACTTGTGCATAATTAATCAGCAGTGTGGCTC  600

seq1  TCACAGTCCCAGCATAAAAGTTAAAACCCGTTTTAAGGCGCTCTGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTCCCAGCATAAAAGTTAAAACCCGTTTTAAGGCGCTCTGTATTT  650

seq1  TATGCTCGGCATCACTGTCAGGCAGGTTTCGGGGGGAGACAGGTATTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATGCTCGGCATCACTGTCAGGCAGGTTTCGGGGGGAGACAGGTATTTGT  700

seq1  ATGTGGTGCCAAGCTGGAGTTTCCATAGCAACAGGCTTTCTCCTTCCTCA  750
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTGGTGCCAAGCTGGAGTTCCCATAGCAACAGGCTTTCTCCTTCCTCA  750

seq1  CGCTGAACTCCTAG-AATGAGCTTCATCTGATCACTCTTGGGCTCACCTA  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGCTGAACTCCTAGAAATGAGCTTCATCTGATCACTCTTGGGCTCACCTA  800

seq1  AAGCGTTGTGGGTAAGAGACTGTGAGTGGCTACCAGAGCCTTCCAGGAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTTGTGGGTAAGAGACTGTGAGTGGCTACCAGAGCCTTCCAGGAAC  850

seq1  TGCGGATGCTCCGTTCCCAGGCCTGTGTTGTGTGTAGATGTGGCCGTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGATGCTCCGTTCCCAGGCCTGTGTTGTGTGTAGATGTGGCCGTGTG  900

seq1  AGCTGCTGGCCAGTCACCAGCAGCAACAGTAGCATGATACCATCATTACA  949
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  AGCTGCTGGCCAGTC-CCAGCAGCAACAGTAGCATGATA-CATCATTACA  948

seq1  ACCAACATCACCACTGTCATCACCATCATCGCCAATGTGACCATCAGCAA  999
      ||||||||||||||||| |||||||||  |||| ||||||||||||||||
seq2  ACCAACATCACCACTGT-ATCACCATCTACGCCCATGTGACCATCAGCAA  997

seq1  CAGAAATATCAC  1011
      ||||||||||||
seq2  CAGAAATATCAC  1009