BAC Information

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BAC

Clone NameB6Ng01-020M07
ChromosomeX (Build37)4 (Build37)
Map Location 31,391,026 - 31,391,8918,331,065 - 8,331,631
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533, LOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606
Downstream geneLOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781, LOC100039515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020M07.bB6Ng01-020M07.g
ACCDH853468DH853469
length939782
definitionDH853468|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M07, 5' end.DH853469|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(31,391,026 - 31,391,891)(8,331,065 - 8,331,631)
sequence
gaattcacaaaattcacatggccatccccaatgttctacaagtagtgaac
aattgcaggcaggagtgaggggtttccttcagtggggattcctgaaagtt
ggtcagagagctctagggacgtagttttcattaatcattatcaacactga
gtaaggctttctggtaatggagctgacattgaatcatctgtgttcctttc
agtgacctcaacaaactcattggttcactaagctaaaatcaggtgctatg
atgttggctttgtttcactcaacgtcctacttggagtaaacatatacttg
ttcatatattttcaggaaaatttacacaacagaaggtagaaacttctaaa
caaaagaatatttctctttgctagtttagtctactcactctatatggaat
ataaggatggaaaagaacaccaccaccccctacattaatttgggccacac
ctttagtgggacacctacataaggacattggaagaaggaagattcactct
ctgcttgcacttacttgccagcacatctgttgggacctacttccacagaa
gaccagctgaaacaactagcctcatgagactgagcaactactagattctt
ggacttcccatccacagcagtccattgttgggttagttggactacagact
aagtcatcacaataaattctgttaatatatagacacattccataagttct
ttaactctagagaaccttgacgaatagagaagttggtaccaggtactggt
attgctgtgataggtctcatcatgctttgtttggaagaatgtggattttg
aggctttggatttggaaagtaatggaatgctttaagtgggggcttaatgg
gacatcctagtaggaatatggaagactttgtgctgagagtgatttgaact
atgcagatctggctcaaaaggattcatcgaggagaattt
gaattcttttatcatgtttaggtatgggccttgaattcctgatctttaca
agacttttatcatgaatggatgttggatcttgtcgaatgctttttctgca
tctaacgagatgatcatgtggtttttgtctttgagtttgtttatatagtg
gattacgttgatggatttccatatattaagccatacctgcatccctggaa
taaaacctacttggtcaggatggatgattgttttaatgtgttcttggatt
cggttagcgagaattttattgaggatttttgcatcgatattcataaggga
atttggtctgaagttctctatctttgttggatctttctgtggtttaggta
tctgagtaattgtggcttcataggatgagttgggtagactaccttctact
tctattttgtggaatagtttgtgcagaactggaattagatcttctttgaa
agtctgatagaactctgcactaaacccatctggtcctgggcttttttttg
gttgggagactattaaagactgcttctatttctttaggtgatatgggact
gtttagatcgttaacttgatcctggtttaactttggtacctggtatctgt
ctagaaatttgtccattttgtccaggttttccagttttgttgagtatatc
cttacgtagaaggatatgatggtgttttggatcttcaggatctgttgtta
tgtctcccttttatttctgattttgttcattaggatgcttttccctgtac
cctctagtgagtcgggctaagtttatctatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31391026_31391891
seq2: B6Ng01-020M07.b_42_907

seq1  GAATTCACAAAATTCACATGGCCATCCCCAATGTTCTACAAGTAGTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAATTCACATGGCCATCCCCAATGTTCTACAAGTAGTGAAC  50

seq1  AATTGCAGGCAGGAGTGAGGGGTTTCCTTCAGTGGGGATTCCTGAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGGCAGGAGTGAGGGGTTTCCTTCAGTGGGGATTCCTGAAAGTT  100

seq1  GGTCAGAGAGCTCTAGGGACGTAGTTTTCATTAATCATTATCAACACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAGAGCTCTAGGGACGTAGTTTTCATTAATCATTATCAACACTGA  150

seq1  GTAAGGCTTTCTGGTAATGGAGCTGACATTGAATCATCTGTGCTCCTTTC  200
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTAAGGCTTTCTGGTAATGGAGCTGACATTGAATCATCTGTGTTCCTTTC  200

seq1  AGTGACCTCAACAAACTCATTGGTTCACTAAGCTAAAATCAGGTGCAATG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTGACCTCAACAAACTCATTGGTTCACTAAGCTAAAATCAGGTGCTATG  250

seq1  ATGTTGGCTTTGTTTCACTCAACGTCCTACTTGGAATAAACATATACTTG  300
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGTTGGCTTTGTTTCACTCAACGTCCTACTTGGAGTAAACATATACTTG  300

seq1  TTCATATATTTTCAGGAAAATTTACACAACCGAAGGTAGAAACTTCTAAA  350
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCATATATTTTCAGGAAAATTTACACAACAGAAGGTAGAAACTTCTAAA  350

seq1  CAAAAGAATATTTCTCTTCGTTAGTTTAGTCTACTCACTCTATATGGAAA  400
      |||||||||||||||||| | |||||||||||||||||||||||||||| 
seq2  CAAAAGAATATTTCTCTTTGCTAGTTTAGTCTACTCACTCTATATGGAAT  400

seq1  ATAAGGATGGAAAAGAACACCACCACCCCCTACATTAATTTGGGCCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGATGGAAAAGAACACCACCACCCCCTACATTAATTTGGGCCACAC  450

seq1  CTTTAGTGGGACACCTACATAAGGACATTGGAAGAAGGAAGATTCACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTGGGACACCTACATAAGGACATTGGAAGAAGGAAGATTCACTCT  500

seq1  CTGCTTTCACTTACTTGCCAGCACATCTGTTGGGACCTTCTTCCACAGAA  550
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGCTTGCACTTACTTGCCAGCACATCTGTTGGGACCTACTTCCACAGAA  550

seq1  GACCAGCTGAAACAACTAGCCTCATGAGACTGAGCAACTACTAGATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCTGAAACAACTAGCCTCATGAGACTGAGCAACTACTAGATTCTT  600

seq1  GGACTTCCCATCCACAGCAGTCCATTGTTGGGTTAGTTGGACTACAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCCCATCCACAGCAGTCCATTGTTGGGTTAGTTGGACTACAGACT  650

seq1  AAGTCATCACAATAAATTCTGTTAATATATAGACACATTCCATAAGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCACAATAAATTCTGTTAATATATAGACACATTCCATAAGTTCT  700

seq1  TTAACTCTAGAGAACCTTGACGAATAGAGAAGTTGGTACCAGGCACTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAACTCTAGAGAACCTTGACGAATAGAGAAGTTGGTACCAGGTACTGGT  750

seq1  ATTGCTGTGATAGGTCTCATCATGCTTTGTTTGGAAGAATGTGGATTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTGATAGGTCTCATCATGCTTTGTTTGGAAGAATGTGGATTTTG  800

seq1  AGGCTTTGGATTTGGAAAGTAATGGAATGCTTTAAGTGGGGGCTTAATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGGATTTGGAAAGTAATGGAATGCTTTAAGTGGGGGCTTAATGG  850

seq1  GACATCCTAGTAGGAA  866
      ||||||||||||||||
seq2  GACATCCTAGTAGGAA  866

seq1: chr4_8331065_8331631
seq2: B6Ng01-020M07.g_288_850 (reverse)

seq1  AGATAGATAAACCCTTAGCTAGACTCACTAAAGGGTACAGGG-AAAGCAT  49
      |||||||||||  ||||||  ||||||||| ||||||||||| |||||||
seq2  AGATAGATAAA--CTTAGCCCGACTCACTAGAGGGTACAGGGAAAAGCAT  48

seq1  CCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTG  99
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTAATGAACAAAATCAGAAAT-AAAAGGGAGACATAACAACAGATCCTG  97

seq1  AAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACA  149
      |||  |||||||||||||||| ||||||||||  |||| |||||||||||
seq2  AAG--ATCCAAAACACCATCATATCCTTCTACGTAAGGATATACTCAACA  145

seq1  AAACTGGAAAACCTGGACTAAATGGACAAATTTCTAGACAGATACCAGGT  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAACTGGAAAACCTGGACAAAATGGACAAATTTCTAGACAGATACCAGGT  195

seq1  ACCAAAGTTAAATCAGGATCAAGTTAATGATCTAAACAGTCCCATATCCC  249
      |||||||||||| |||||||||||||| |||||||||||||||||||| |
seq2  ACCAAAGTTAAACCAGGATCAAGTTAACGATCTAAACAGTCCCATATCAC  245

seq1  CTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAGCCAAAAAAAAGCCC  299
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  CTAAAGAAATAGAAGCAGTCTTTAATAGTCTCCCAACCAAAAAAAAGCCC  295

seq1  AGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATC  349
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACTTTCAAAGAAGATC  345

seq1  TAATTCCAGTTCTGCACAAACTATTCCACAAAATAGAAGAAGAAGGTACT  399
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  TAATTCCAGTTCTGCACAAACTATTCCACAAAATAGAAGTAGAAGGTAGT  395

seq1  CTACCCAACTCATTCTATGAAGCTACAATTACTCTGATACCTAAACCACA  449
      ||||||||||||| ||||||||| |||||||||| |||||||||||||||
seq2  CTACCCAACTCATCCTATGAAGCCACAATTACTCAGATACCTAAACCACA  445

seq1  GAAAGATCCAACAAAGATAGAGATCTTCAGACCAATTTCCCTTATGAATA  499
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  GAAAGATCCAACAAAGATAGAGAACTTCAGACCAAATTCCCTTATGAATA  495

seq1  TCGATGCAAAAATACTCAATAAAATTCTCGCTAACCGAACCCAAGAAAAC  549
      ||||||||||||| ||||||||||||||||||||||||| ||||||| ||
seq2  TCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACAC  545

seq1  ATTAAAGCAATCATCCAT  567
      |||||| |||||||||||
seq2  ATTAAAACAATCATCCAT  563