BAC Information

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BAC

Clone NameB6Ng01-021H08
Chromosome4 (Build37)
Map Location 65,784,763 - 65,785,626
singlet/doubletsinglet
Overlap geneAstn2
Upstream genePappa, Trim32
Downstream geneLOC667499, Tlr4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021H08.bB6Ng01-021H08.g
ACCDH853957DH853958
length1,147866
definitionDH853957|Mus musculus domesticus DNA, BAC clone: B6Ng01-021H08, 5' end.DH853958|Mus musculus domesticus DNA, BAC clone: B6Ng01-021H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacataaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatcaaaacgctgacaccattgcataccctagcaagattttgttgaaa
ggacccagatgtagctatctcttgtgaactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tgagagctagagaagaacccaagagctaaagggatctgcaaccctatagt
gaacaacattatgactacagtaccctgagctctgactctagctgcatatg
tatcaagatgctaatcgcatccctggaagaaaggcccatggaccgcaact
ttgattgcctgttacggaatgccaggccaaatggaatgtggtgtgag
gaattctctaataagaatcagaaagttaactaatcccatggtctttccta
acttcacaggataatatgaccaatgaacatccattagttgctttatcttc
cttgcataaatctataatgaaggagacgtgcaaaatgagattagaataga
ccttggacctcaaggcagtcttcagaggggtccagtaaggtccagactcc
atgaaagcgccagcctagattatctgaagaaaggttggccatctgagcag
ctatgtaggcctgcagaaatggcatccaaagtgtaagattaacatgcacc
tctctttacaccaatctgacgagaggccctgggtatgagcatggtgcagt
atgtggagctagaacatccatcattattatatgagttcaaatctcagctt
tatggccttggaagatcacctaatttctctgagtctgtgtctacttctaa
acagcagtgaatgatagttgccttttaaacttgttaggagaaggaaatga
gaaaacataaagaaatgccaagatcatttcctggcaaagtgttggtgctt
gggaactgtgaaatttttttctaacacatattagaagtgtctacaaaaat
taaagagagtgaaggatatgctactgaaacttgaacccaaatctatgccc
atttcagtgaaagtgcatacagaaattacattatgaatggcagattggtt
acacagtagagtctgggtttaggcacagtatgttctgcaggctacatgtt
ttaacttgcccggtatctggaaatctggaaatcagtgtgcacctctgtgt
ctttgtagaattttcagtctcctcttctctcttctctcttcttctcttct
tcttctctcttcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_65784763_65785626
seq2: B6Ng01-021H08.g_67_932 (reverse)

seq1  AGAAGAAGA-AGAAGAAGAAGAAGAAGAAGA-AGAAGA-AGAAGAGGAGA  47
      ||||||||| ||||||||||| ||||||||| |||||| |||||||||||
seq2  AGAAGAAGAGAGAAGAAGAAG-AGAAGAAGAGAGAAGAGAGAAGAGGAGA  49

seq1  CTGAAAATTCTACAAAGACACAGAGGTGCACACTGATTTCCAGATTTCCA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTCTACAAAGACACAGAGGTGCACACTGATTTCCAGATTTCCA  99

seq1  GATACCGGGCAAGTTAAAACATGTAGCCTGCAGAACATACTGTGCCTAAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCGGGCAAGTTAAAACATGTAGCCTGCAGAACATACTGTGCCTAAA  149

seq1  CCCAGACTCTACTGTGTAACCAATCTGCCATTCATAATGTAATTTCTGTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACTCTACTGTGTAACCAATCTGCCATTCATAATGTAATTTCTGTA  199

seq1  TGCACTTTCACTGAAATGGGCATAGATTTGGGTTCAAGTTTCAGTAGCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTCACTGAAATGGGCATAGATTTGGGTTCAAGTTTCAGTAGCAT  249

seq1  ATCCTTCACTCTCTTTAATTTTTGTAGACACTTCTAATATGTGTTAGAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCACTCTCTTTAATTTTTGTAGACACTTCTAATATGTGTTAGAAA  299

seq1  AAAATTTCACAGTTCCCAAGCACCAACACTTTGCCAGGAAATGATCTTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCACAGTTCCCAAGCACCAACACTTTGCCAGGAAATGATCTTGG  349

seq1  CATTTCTTTATGTTTTCTCATTTCCTTCTCCTAACAAGTTTAAAAGGCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTATGTTTTCTCATTTCCTTCTCCTAACAAGTTTAAAAGGCAA  399

seq1  CTATCATTCACTGCTGTTTAGAAGTAGACACAGACTCAGAGAAATTAGGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTCACTGCTGTTTAGAAGTAGACACAGACTCAGAGAAATTAGGT  449

seq1  GATCTTCCAAGGCCATAAAGCTGAGATTTGAACTCATATAATAATGATGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCAAGGCCATAAAGCTGAGATTTGAACTCATATAATAATGATGG  499

seq1  ATGTTCTAGCTCCACATACTGCACCATGCTCATACCCAGGGCCTCTCGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTAGCTCCACATACTGCACCATGCTCATACCCAGGGCCTCTCGTC  549

seq1  AGATTGGTGTAAAGAGAGGTGCATGTTAATCTTACACTTTGGATGCCATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGTGTAAAGAGAGGTGCATGTTAATCTTACACTTTGGATGCCATT  599

seq1  TCTGCAGGCCTACATAGCTGCTCAGATGGCCAACCTTTCTTCAGATAATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGCCTACATAGCTGCTCAGATGGCCAACCTTTCTTCAGATAATC  649

seq1  TAGGCTGGCGCTTTCATGGAGTCTGGACCTTACTGGACCCCTCTGAAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGGCGCTTTCATGGAGTCTGGACCTTACTGGACCCCTCTGAAGAC  699

seq1  TGCCTTGAGGTCCAAGGTCTATTCTAATCTCATTTTGCACGTCTCCTTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAGGTCCAAGGTCTATTCTAATCTCATTTTGCACGTCTCCTTCA  749

seq1  TTATAGATTTATGCAAGGAAGATAAAGCAACTAATGGATGTTCATTGGTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATTTATGCAAGGAAGATAAAGCAACTAATGGATGTTCATTGGTC  799

seq1  ATATTATCCTGTGAAGTTAGGAAAGACCATGGGATTAGTTAACTTTCTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCCTGTGAAGTTAGGAAAGACCATGGGATTAGTTAACTTTCTGA  849

seq1  TTCTTATTAGAGAATTC  864
      |||||||||||||||||
seq2  TTCTTATTAGAGAATTC  866