MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-021H11
Chromosome	4 (Build37)
Map Location	69,940,267 - 69,941,332
singlet/doublet	singlet
Overlap gene	Cdk5rap2
Upstream gene	LOC622491, LOC433716, LOC100039888, LOC242497, LOC671064
Downstream gene	Megf9, LOC100039565
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC622491 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 104 ESTs, 2 Proteins

name	LOC433716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 97 ESTs, 3 Proteins pseudo : _no_value

name	LOC100039888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 906 ESTs, 12 Proteins

name	LOC242497 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242497
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 137 ESTs, 7 Proteins pseudo : _no_value

name	LOC671064 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Cdk5rap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214444 MGI:2384875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Megf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230316 MGI:1918264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039565 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC622491 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252577 GeneID:622491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 104 ESTs, 2 Proteins product : similar to ZH10 protein transcript_id : XM_886923.3

name	LOC100039888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252581 GeneID:100039888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 709 ESTs, 12 Proteins product : similar to Pr22, transcript variant 2 transcript_id : XM_001474088.1

name	LOC100039888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252579 GeneID:100039888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 905 ESTs, 12 Proteins product : similar to Pr22, transcript variant 1 transcript_id : XM_001474074.1

name	Cdk5rap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130243 GeneID:214444 MGI:2384875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDK5 regulatory subunit associated protein 2 transcript_id : NM_145990.3

name	Megf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803271 GeneID:230316 MGI:1918264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple EGF-like-domains 9 transcript_id : NM_172694.2

name	LOC622491 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82893558 GeneID:622491
definition	codon_start : 1 product : similar to ZH10 protein protein_id : XP_892016.1

name	LOC100039888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252580 GeneID:100039888
definition	codon_start : 1 product : similar to Pr22 isoform 1 protein_id : XP_001474124.1

name	LOC100039888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252582 GeneID:100039888
definition	codon_start : 1 product : similar to Pr22 isoform 2 protein_id : XP_001474138.1

name	Cdk5rap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50657347 GeneID:214444 MGI:2384875
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0042808 - neuronal Cdc2-like kinase binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007420 - brain development [Evidence ISS]; GO:0045664 - regulation of neuron differentiation [Evidence ISS] codon_start : 1 product : CDK5 regulatory subunit associated protein 2 protein_id : NP_666102.2

name	Megf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370004 CCDS:CCDS18273.1 GeneID:230316 MGI:1918264
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : EGF-like-domain, multiple 5 protein_id : NP_766282.1

name	LOC100039565 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039565
definition	number : 1 pseudo : _no_value

name	LOC100039565 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039565
definition	number : 2 pseudo : _no_value

name	LOC433716 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252578 GeneID:433716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 97 ESTs, 3 Proteins product : similar to ribosomal protein L7-like 1 pseudo : _no_value transcript_id : XR_031539.1

name	LOC242497 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252569 GeneID:242497
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 137 ESTs, 7 Proteins product : similar to eukaryotic translation initiation factor 3, subunit 8, 110kDa pseudo : _no_value transcript_id : XR_030981.1

name	LOC671064 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252583 GeneID:671064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to 3-hydroxyisobutyrate dehydrogenase pseudo : _no_value transcript_id : XR_031571.1

clone name	MSMg01-290L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-021H11.b	B6Ng01-021H11.g
ACC	DH853963	DH853964
length	1,115	1,054
definition	DH853963\|Mus musculus domesticus DNA, BAC clone: B6Ng01-021H11, 5' end.	DH853964\|Mus musculus domesticus DNA, BAC clone: B6Ng01-021H11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaagggggttatttgatt ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcctcggttttttgttattccagatg aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt aatggggattgcattgaatctgtagattgctttcggcaagatagccattt ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata cagatcaaagcctactttcatgatggttctcaatgcttgaacctctcttc tagtcaccaccaacagagtagtggagagaggatatgcggaatgggactgt taaatttgttcttggacaaatcacatccacctgaattgcaagaatcagta gtcagtctaggccgacggggtgcctgatactctcaaatacttacgaatac ccagcatccgttgta	gaattcctaagcagagatgtgttctggtgaagaagcaaagaggtgatgat tctggtacctccctgaaggctgtgggatgctgggttctgacagctgtttt gtagcagagaagtaactgtacacactgcttcatagcatcagaatggagaa ttacgtttattttctgaccactaaattactgcttttgtgccttccaaaca gaattagatatatcattagcaaaattgcttttgattgttttaaattatac accaaaactgtaatttctagaaaaggtttttctaaagatatcagtagaga ctaaaacaaaaaaatatatatactgccattatattaatggtactcaaaat gcaaatttgtgcaatttggctagaatagaactgctcttctgtgccccagc tccttcagtttgtacctgtgtattaggaaacctgggtaggtttagttttt gtctttgtttttatgtttgcttttttctattgtgtgggagatgccatcct gtgttctggaaattggataattgaattgacttaatttttctaaatatatt cattttcttttttaaataaaaactatctttgccatagttttaaaatggga gagatttttatctattcatttatgtttatcatctgttttgtgtatgaggg acttgctgaatctattatcttacttaatttgttcaacaaatatatgtagg tattataaccactgtacataggaagaaacacagtgccccaagacttacag aactgttcagaatggctccattggtgagtactgagaggatagttgcttgc ttggtttcagaggaaggcagacatttgctctctttgtggactttgtagtg gcagaattggtaatcctgtttcttagctagaactctgatattgtagttaa aagaacatcagagcagagtaacggttagtactatcagaggtctttatact ctgctgcttaagcttgccttagcacttgaataggatcagggcaaccagac tcctggtttttgcaggcatatggaggtagatgccagtgcctccagcacat ggat
quality values	Open. Hide. 61 61 22 33 61 61 47 61 61 41 61 61 26 19 47 61 61 61 47 47 61 61 61 61 61 55 49 52 55 43 52 52 55 52 30 36 55 61 61 59 61 61 61 59 61 61 59 61 59 59 59 61 61 61 59 61 59 59 59 61 61 52 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 45 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 53 53 53 53 61 61 61 61 61 61 46 61 61 53 61 61 61 61 61 53 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 53 61 61 61 61 45 61 61 61 61 61 61 61 61 61 53 39 61 61 61 61 52 61 61 34 61 61 61 61 61 57 57 57 50 57 53 57 53 53 52 53 57 52 47 53 57 53 53 51 50 57 57 57 43 42 33 57 57 57 47 50 53 57 47 53 53 45 52 53 57 53 53 53 57 57 40 53 40 50 53 46 57 53 50 53 57 57 53 38 57 50 50 50 21 47 34 45 52 53 57 50 57 45 38 53 45 43 37 41 47 32 47 34 14 57 32 57 50 52 57 57 53 38 41 45 47 52 53 53 52 28 53 53 38 53 45 50 57 57 57 53 53 42 42 42 45 45 53 45 42 22 46 29 57 57 57 57 53 57 37 45 45 42 41 29 41 28 30 37 24 40 53 42 38 57 52 33 38 21 57 53 24 29 50 37 52 37 36 36 37 50 33 38 35 32 52 42 30 28 53 38 53 52 25 39 52 23 33 52 40 17 34 39 38 50 52 17 11 57 57 29 37 52 37 53 57 57 14 36 19 22 42 27 13 18 37 36 37 39 36 37 40 40 21 29 17 44 20 8 27 29 20 53 52 52 23 19 23 34 32 23 33 20 43 37 37 32 18 19 57 57 57 29 28 32 29 25 24 53 15 31 37 44 29 32 41 37 37 28 40 30 29 28 28 39 20 27 32 30 15 29 14 26 30 39 24 26 22 31 14 33 24 20 13 8 20 17 14 19 10 32 38 20 24 29 15 34 25 32 13 25 30 45 44 11 29 28 19 46 33 29 27 45 24 29 25 34 34 11 27 46 29 29 21 13 45 29 31 29 25 33 51 51 51 19 28 25 28 23 25 29 33 21 7 15 9 29 25 51 36 28 28 38 28 29 24 33 51 9 20 46 23 29 31 14 31 29 15 31 29 29 27 15 51 28 17 14 15 15 14 14 29 21 29 29 29 21 26 29 9 19 7 9 12 28 46 12 25 28 17 33 41 12 24 17 12 8 30 30 17 25 19 22 28 9 26 8 29 14 17 7 15 9 14 14 8 8 17 15 20 20 25 8 23 46 7 10 14 11 29 22 9 31 32 14 11 51 19 7 11 34 31 31 38 13 8 6 6 13 34 8 6 8 12 27 7 9 21 28 19 5 8 10 19 19 9 25 12 6 8 14 28 10 29 29 19 10 5 6 7 25 7 17 6 5 25 35 28 14 5 17 7 6 5 11 14 24 7 27 32 16 12 10 9 9 8 6 8 5 1 13 11 12 5 9 6 29 29 23 13 10 12 6 4 6 5 4 3 4 5 27 30 17 12 8 11 5 5 11 8 4 9 3 5 4 3	Open. Hide. 55 61 50 47 61 55 52 52 49 34 22 43 21 25 55 43 43 40 47 47 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 59 61 59 61 59 61 61 59 61 61 61 61 61 61 59 55 59 59 61 61 59 61 61 61 61 61 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 45 61 43 61 61 61 50 61 61 50 53 61 50 61 61 61 53 61 61 61 61 61 53 47 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 53 61 61 53 53 53 57 57 57 57 57 45 53 57 57 53 43 37 57 53 53 57 46 47 57 53 38 53 57 57 57 53 53 53 57 53 57 57 57 53 52 47 47 31 47 50 34 53 57 57 57 47 47 34 53 53 57 53 57 53 50 57 50 47 30 57 57 57 57 47 36 57 50 57 53 57 42 30 53 57 57 57 45 57 45 41 52 52 45 57 40 50 57 39 37 22 53 53 57 57 38 52 36 53 50 43 53 42 47 44 38 34 40 47 47 45 53 47 47 32 45 53 50 40 50 50 50 48 48 40 41 33 37 50 35 20 57 38 57 57 23 7 17 52 30 33 52 30 50 47 52 50 50 42 53 52 36 30 19 41 38 38 32 53 28 23 41 30 42 43 28 37 33 53 38 30 36 27 44 33 50 43 42 52 18 42 53 30 35 18 50 29 42 36 52 40 53 50 37 24 47 42 37 24 31 50 38 37 30 9 26 41 34 30 34 9 34 37 37 13 43 31 28 40 47 24 37 31 41 23 37 36 53 37 25 36 42 24 27 26 31 33 39 37 25 41 18 24 30 18 29 16 53 9 25 30 29 44 35 17 33 8 23 35 6 53 44 29 21 8 40 31 16 31 14 10 15 8 28 16 20 15 12 9 44 30 23 32 23 22 7 23 25 45 44 24 12 45 11 27 15 25 51 28 31 18 25 29 13 47 30 28 26 19 32 43 23 24 32 25 9 14 10 21 35 33 22 21 8 47 12 15 22 28 51 23 20 20 30 17 36 25 17 18 29 31 35 18 6 7 8 16 37 7 18 24 25 22 38 43 41 31 10 22 29 17 14 34 23 23 8 37 6 20 9 9 37 14 35 24 27 29 9 33 8 9 30 28 28 20 31 46 20 23 17 33 18 19 6 24 7 21 11 51 26 18 17 17 28 26 28 29 35 13 41 15 10 29 33 16 13 31 14 29 15 39 7 18 19 27 35 7 15 12 41 14 28 20 31 11 11 29 9 23 35 19 11 14 12 5 11 10 23 15 22 17 9 8 24 7 5 10 29 17 32 16 8 10 5 10 6 17 17 9 21 28 9 9 28 5 9 10 7 8 12 26 19 38 7 30 8 16 6 6 13 11 19 6 10 9 15 12 14 20 10 15 9 10 5 7 16 6 6 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_69940267_69941332
seq2: B6Ng01-021H11.g_67_1120 (reverse)

seq1  ATCCATGCTGCTTGAGGCACTTGCATTCTTACCTCACTATGCCTGCATAT  50
      ||||||| |||| |||||||| ||||   ||||||  |||||||||  | 
seq2  ATCCATG-TGCTGGAGGCACTGGCAT--CTACCTCCATATGCCTGC--AA  45

seq1  AACCCAGGAGTCTGGTTTGCACTGATCCTATTCAAGGTGCTAAGGCCAAG  100
      || |||||||||||| |||| |||||||||||||| ||||||||| ||||
seq2  AAACCAGGAGTCTGG-TTGCCCTGATCCTATTCAA-GTGCTAAGG-CAAG  92

seq1  CCTAAAGCAAGCAGAGTATAAAGACCTCTTGATAAGTACTTACCGTTACT  150
       || |||| ||||||||||||||||||| |||| |||||| |||||||||
seq2  -CTTAAGC-AGCAGAGTATAAAGACCTC-TGAT-AGTACTAACCGTTACT  138

seq1  CTGCTCTGATGTTCTTTTTAACTAC-ATATCAGAGTTCTAGCTTAAGAAC  199
      |||||||||||||| |||||||||| ||||||||||||||||| |  |||
seq2  CTGCTCTGATGTTC-TTTTAACTACAATATCAGAGTTCTAGCTAAGAAAC  187

seq1  AGGATTACCAATTCTGCCACTACAAAGTCCACAAAGGGAGCAAATGTCTG  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGATTACCAATTCTGCCACTACAAAGTCCACAAAGAGAGCAAATGTCTG  237

seq1  CCTTCCTCTGAAACCAAGCAAGCAACTATCCTCTCAGTACTCACCAATGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCTGAAACCAAGCAAGCAACTATCCTCTCAGTACTCACCAATGG  287

seq1  AGCCATTCTGAACAGTTCTGTAAGTCTTGGGGCACTGTGTTTCTTCCTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCTGAACAGTTCTGTAAGTCTTGGGGCACTGTGTTTCTTCCTAT  337

seq1  GTACAGTGGTTATAATACCTACATATATTTGTTGAACAAATTAAGTAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGGTTATAATACCTACATATATTTGTTGAACAAATTAAGTAAGA  387

seq1  TAATAGATTCAGCAAGTCCCTCATACACAAAACAGATGATAAACATAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGATTCAGCAAGTCCCTCATACACAAAACAGATGATAAACATAAAT  437

seq1  GAATAGATAAAAATCTCTCCCATTTTAAAACTATGGCAAAGATAGTTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGATAAAAATCTCTCCCATTTTAAAACTATGGCAAAGATAGTTTTT  487

seq1  ATTTAAAAAAGAAAATGAATATATTTAGAAAAATTAAGTCAATTCAATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAAGAAAATGAATATATTTAGAAAAATTAAGTCAATTCAATTA  537

seq1  TCCAATTTCCAGAACACAGGATGGCATCTCCCACACAATAGAAAAAAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTCCAGAACACAGGATGGCATCTCCCACACAATAGAAAAAAGCA  587

seq1  AACATAAAAACAAAGACAAAAACTAAACCTACCCAGGTTTCCTAATACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAAACAAAGACAAAAACTAAACCTACCCAGGTTTCCTAATACAC  637

seq1  AGGTACAAACTGAAGGAGCTGGGGCACAGAAGAGCAGTTCTATTCTAGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAAACTGAAGGAGCTGGGGCACAGAAGAGCAGTTCTATTCTAGCC  687

seq1  AAATTGCACAAATTTGCATTTTGAGTACCATTAATATAATGGCAGTATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCACAAATTTGCATTTTGAGTACCATTAATATAATGGCAGTATAT  737

seq1  ATATTTTTTTGTTTTAGTCTCTACTGATATCTTTAGAAAAACCTTTTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTTGTTTTAGTCTCTACTGATATCTTTAGAAAAACCTTTTCTA  787

seq1  GAAATTACAGTTTTGGTGTATAATTTAAAACAATCAAAAGCAATTTTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACAGTTTTGGTGTATAATTTAAAACAATCAAAAGCAATTTTGCT  837

seq1  AATGATATATCTAATTCTGTTTGGAAGGCACAAAAGCAGTAATTTAGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATATCTAATTCTGTTTGGAAGGCACAAAAGCAGTAATTTAGTGG  887

seq1  TCAGAAAATAAACGTAATTCTCCATTCTGATGCTATGAAGCAGTGTGTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATAAACGTAATTCTCCATTCTGATGCTATGAAGCAGTGTGTAC  937

seq1  AGTTACTTCTCTGCTACAAAACAGCTGTCAGAACCCAGCATCCCACAGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTCTCTGCTACAAAACAGCTGTCAGAACCCAGCATCCCACAGCC  987

seq1  TTCAGGGAGGTACCAGAATCATCACCTCTTTGCTTCTTCACCAGAACACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGAGGTACCAGAATCATCACCTCTTTGCTTCTTCACCAGAACACA  1037

seq1  TCTCTGCTTAGGAATTC  1066
      |||||||||||||||||
seq2  TCTCTGCTTAGGAATTC  1054

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information