BAC Information

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BAC

Clone NameB6Ng01-021J14
Chromosome4 (Build37)
Map Location 145,705,391 - 145,706,266
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J14.bB6Ng01-021J14.g
ACCDH854058DH854059
length1,0401,207
definitionDH854058|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J14, 5' end.DH854059|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattatagttatgtatggcagactacatcattgaatagaaaga
gtcccccacaaaatcacttagaatcacagctaagtcactcccatattcag
aaatttacaatggtttagaaagtagatcctgctgtggtttaaggaggaac
tagagtattgcattattcatgagaagattagctagagcagaactccctag
cacatactttccctagcccagaggaatagcacagtcaggtatttactaag
agctggctggtggtgggataaacaataaatcagaattagaactatggttt
gcacatgaaagcccttgccccaggagtgtaacaacctcacacctggcttc
taaggatatagctgacctgagacagagctgactttgtctcagttgttaca
ttacctagttcctgccagtctttatgtatgcattcttctgttttgtgtaa
agagtcattaagcattgggtaacctcaatgtaccttggctgatgtgtcac
cccacttccttattttcttttgtattacaagtctgatgctcactttgaga
aattacattcagatcaacattcccttgtgttaaagtctgatagtcactca
acaccgactccttgcccacctgaataccaaaaccctgattttcctgtgag
ttgagggacttcctgagtccagtccatagcacctgagttcaccatgaatt
tcttggcttgaaagaaagctctcatccatgtatcatgttctcagagagat
acatggggatagaactcctgcctcagtccagaagttttccagaacagaga
aactgacattcatgccactgatgaaaaggaagaacctaagagattttatt
tggggctccctttagtgggaagggaggctaccaatggccagatgagacac
agggctaattaataaaaagggaaaattgtgaagagaaagtgatgtggact
cagttgtcttgtcttagtggggactcatgtagtaagcatgctctgtgcca
cagttgacccatggagaatgtcatgggtgtgtgtttaggg
gaattcatacaggagagaaaccttacaaatgtaatgaatgtgacaaatgc
tttactgacaaaggcagtctgagagttcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgagtgtgacaaatgttttaccgaaccatccc
atcttagtattcatcgtagaattcattcaggagagaaaccttacaaatgt
agtgaatgcgacaaatgctttactgacaaaggcagtctgagagttcatca
gagaattcatacaggagagaaaccgtaccaatgcagtgagtgtgacaaat
gctttactgacaaaagcagtcttagagttcatcatagaattcatgcagga
gagaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaagg
ctatctgagagttcatcatagaattcatgcaggagagaaatcttacaaat
gtagtgaatgtgacaaatgctttactcacaaaggctctctgagagttcat
catagaattcatgcaggagagaaaccttacaaatgtagtgaatgtgacaa
atgttttactgagaaaaacagtctgagaaggcatcagagaattcatacag
gagagaaaccttataaatgcagtgaatgtgacaaatgcttttacccgaaa
atcacatcttagtattcatcagagaattcatacaggagagaaactgtaca
aatgcagtgaatgtgacaaatgctttacccaacaatgccatcttagtatt
catcagaaaattcattcaggagagaatcttacaaatgcaatgaatgcgac
aaatgctttactgacaaacacagtctgagaaagcatcagataattcatac
aggagagaaaccttacaatgtaatgaatgtgacaaatcctttactgaaat
ggctgtctgagattcatcagagtattcataaatgagagaaaccttacaat
gtagtgaatgtgacaattgctttactaaaaatccagtttgaggatcatca
gagattctacaggaaagaaccttacaatgtattgattggccaatgtttta
ttaaaatgcagtctgatattcatcagagatctactaaggaacttaaattt
tggaatggacagcttcctgaaagtcgagtgctccagatatctatacggga
aatctcatgattgtaggttacaatgtttgccaatcctatcttgtttttat
cgataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145705391_145706266
seq2: B6Ng01-021J14.b_228_1082

seq1  AGCAGAACTCCCTAGCACATACTTTCCCTAGCCCAGAGGAATAGCACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACTCCCTAGCACATACTTTCCCTAGCCCAGAGGAATAGCACAGT  50

seq1  CAGGTATTTACTAAGAGCTGGCTGGTGGTGGGATAAACAATAAATCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATTTACTAAGAGCTGGCTGGTGGTGGGATAAACAATAAATCAGAA  100

seq1  TTAGAACTATGGTTTGCACATGAAAGCCCTTGCCCCAGGAGTGTAACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTATGGTTTGCACATGAAAGCCCTTGCCCCAGGAGTGTAACAAC  150

seq1  CTCACACCTGGCTTCTAAGGATATAGCTGACCTGAGACAGAGCTGACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACCTGGCTTCTAAGGATATAGCTGACCTGAGACAGAGCTGACTTT  200

seq1  GTCTCAGTTGTTACATTACCTAGTTCCTGCCAGTCTTTATGTATGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGTTGTTACATTACCTAGTTCCTGCCAGTCTTTATGTATGCATTC  250

seq1  TTCTGTTTTGTGTAAAGAGTCATTAAGCATTGGGTAACCTCAATGTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTGTAAAGAGTCATTAAGCATTGGGTAACCTCAATGTACCT  300

seq1  TGGCTGATGTGTCACCCCACTTCCTTATTTTCTTTTGTATTACAAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGATGTGTCACCCCACTTCCTTATTTTCTTTTGTATTACAAGTCTG  350

seq1  ATGCTCACTTTGAGAAATTACATTCAGATCAACATTCCCTTGTGTTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCACTTTGAGAAATTACATTCAGATCAACATTCCCTTGTGTTAAAG  400

seq1  TCTGATAGTCACTCAACACCGACTCCTTGCCCACCTGAATACCAAAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGTCACTCAACACCGACTCCTTGCCCACCTGAATACCAAAACCC  450

seq1  TGATTTTCCTGTGAGTTGAGGGACTTCCTGAGTCCAGTCCATAGCACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCCTGTGAGTTGAGGGACTTCCTGAGTCCAGTCCATAGCACCTG  500

seq1  AGTTCACCATGAATTTCTTGGCTTGAAAGAAAGCTCTCATCCATGTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACCATGAATTTCTTGGCTTGAAAGAAAGCTCTCATCCATGTATCA  550

seq1  TGTTCTCAGAGAGATACATGGGGATAGAACTCCTGCCTCAGTCCAGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGAGAGATACATGGGGATAGAACTCCTGCCTCAGTCCAGAAGT  600

seq1  TTTCCAGAACAGAGAAACTGACATTCATGCCACTGATGAAAAGGAAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAACAGAGAAACTGACATTCATGCCACTGATGAAAAGGAAGAAC  650

seq1  CTAAGAGATTTTATTTGGGGCTCCCTTAAGTGAGAAGGGAGGCTACCAAT  700
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CTAAGAGATTTTATTTGGGGCTCCCTTTAGTGGGAAGGGAGGCTACCAAT  700

seq1  GGCCAGATGAGACACAGGGGTAAATTAATAAAAAAGGGAAAAATTGTGGA  750
      ||||||||||||||||||| | ||||||||||||  || |||||||||  
seq2  GGCCAGATGAGACACAGGGCT-AATTAATAAAAA--GGGAAAATTGTG--  745

seq1  AGGAGAAAAGTGAATGTTGGACTCAGTTGTCTTGTCCTTAGTGGGGGACT  800
      | ||| |||||| ||| |||||||||||||||||| |||||| |||||||
seq2  AAGAG-AAAGTG-ATG-TGGACTCAGTTGTCTTGT-CTTAGT-GGGGACT  790

seq1  TCCATGGTAGTTAGGCCATGGCTCTGTGCCCACAGGGTTGACCCAATGGA  850
        ||| ||||| ||  ||| |||||||| |||||  |||||||| |||||
seq2  --CAT-GTAGTAAG--CAT-GCTCTGTG-CCACA--GTTGACCC-ATGGA  830

seq1  GGAATGTCATGGGTGTGTGTTTAGGG  876
       |||||||||||||||||||||||||
seq2  -GAATGTCATGGGTGTGTGTTTAGGG  855