BAC Information

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BAC

Clone NameB6Ng01-022A22
Chromosome4 (Build37)
Map Location 91,877,471 - 91,964,799
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022A22.bB6Ng01-022A22.g
ACCDH854391DH854392
length1,0181,001
definitionDH854391|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A22, 5' end.DH854392|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,877,471 - 91,878,276)(91,963,801 - 91,964,799)
sequence
gaattctttgttcagctgtgagccccattttttaatggggttatttgatt
ttctgatgtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtggtct
ttttgtcttactgacggtgtctttttccttgcagaaactttggagtttca
tgaggtcccatttgtcaattatcgatcttacagcacaagccattgctgtt
ctattcaggaatttttccctgtgcccatatcttcgagactttcccccagt
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgatcttagtacaaggagagaggaatgggtatattcgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttttccactggatggttttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcacttctattccattggtc
tacttgtctgtcactataccagtaccatgcagtttttataacaattgctc
tgtagtaaagctttaggtcatgcatggtgattccaccagaggtactttta
tccttgagaagaacttttgctatcctaggttttttgttattccagatgaa
tttgcagatcccagcatgaattcttgaccctcttctctttacttaccaag
tgctccacagagatttggttatagttatatagtatgccctagttttgatt
gtatcagtgaatttgcatgtatcatcatattatatccgtatgtacagggt
tttcattcagtagtatcaggccagaaagacagtctctggaccttatcctg
atcttacagcccaaaatgtgcactcagctttaatgctgtatttttatcat
agcattccaaatatttgggcattggtcaacccaaccacctaattttaaag
tttcattttttattacgc
gaattctgcttttccaaacaggagtcccagctcctgaacatcctcattaa
cagttgaaaaggctcttacttttttatttcagtttttctggaatgagcaa
aatggaatattatagaaggtattctgttctcttgagctaaatttttcttg
ctttctaaaaccatatttaactaactcagtcttacaaaaatttttaagtt
gagtggcatcccaccaatttagttgttttaacaatagttttctttttcat
aagacagtaattattctttgaaaataccatacgtgtataaaactatattc
attgaatctgcccccattacccccccatgtcccctgtcctccattttcag
tagcctactgtgtccagttaatgtagctcacacatgcattcctttgttct
tccacaaacacattggactcattttgtttatgttgtcagcatttctattg
agtttggtgtggattgatatggattaagtctatagatcaatcaaggcaga
attatctcatttcctcattgatttctttccaatatacataatatattgca
accttccaaatgttttaatatactttggtatttttactaacattttctag
tatttaaaagagattttgacataatttattatatttacatgcaaatattc
cagttttaatactatcttagttttttttaagatttcaattgctattacat
gtgatgactgaattttcattaatatgtaagaattgtattcaactgaatta
ttggttccttttatagtttaccttgatgtgtttgctgctgcatgtgtgga
tttcagataacactatcattagggtgttcactcttttccctgtgtttgtt
tgtttgttattgttgtgttatatcgctgcataaaacaaatgttcctgacc
aagatggtaagggaaaaatataaattataaaattctattacatcctatta
tatctcactgtttctatataaacctcataaagaaaaagttgtttgttatg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91877471_91878276
seq2: B6Ng01-022A22.b_258_1064

seq1  TTGTCAATTATCGATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAATTATCGATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAA  50

seq1  TTTTTCCCTGTGCCCATATCTTCGAGACTTTCCCCCAGTTTCTCCTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTGTGCCCATATCTTCGAGACTTTCCCCCAGTTTCTCCTCTAT  100

seq1  AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATT  150

seq1  TGATCTTAGTACAAGGAGAGAGGAATGGGTATATTCGCATTCTTCTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTAGTACAAGGAGAGAGGAATGGGTATATTCGCATTCTTCTACAT  200

seq1  GATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTC  250

seq1  CACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTG  300

seq1  TGGGTTCATTTCTGGGTCTTCACTTCTATTCCATTGGTCTACTTGTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCATTTCTGGGTCTTCACTTCTATTCCATTGGTCTACTTGTCTGT  350

seq1  CACTATACCAGTACCATGCAGTTTTTATAACAATTGCTCTGTAGTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATACCAGTACCATGCAGTTTTTATAACAATTGCTCTGTAGTAAAGC  400

seq1  TTTAGGTCATGCATGGTGATTCCACCAGAGGTACTTTTATCCTTGAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTCATGCATGGTGATTCCACCAGAGGTACTTTTATCCTTGAGAAG  450

seq1  AACTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAGATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAGATCC  500

seq1  CAGCATGAATTCTTGACCCTCTTCTCTTTACTTACCAAGTGCTCCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGAATTCTTGACCCTCTTCTCTTTACTTACCAAGTGCTCCACAGA  550

seq1  GATTTGGTTATAGTTATATAGTATGCCCTAGTTTTGATTGTATCAGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTTATAGTTATATAGTATGCCCTAGTTTTGATTGTATCAGTGAA  600

seq1  TTTGCATGTATCATCATATTATATCCGTATGTACAGGG-TTTCATTCAGT  649
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTGCATGTATCATCATATTATATCCGTATGTACAGGGTTTTCATTCAGT  650

seq1  AGTATCAGGCCAGAAAGACAGTCTCTGGACCTTATCCTGATCTTACAAGC  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTATCAGGCCAGAAAGACAGTCTCTGGACCTTATCCTGATCTTAC-AGC  699

seq1  CCAAAATGTGCACTCAGCTTTAATGCTGTATTTTTTATCATAGCATTCCA  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCAAAATGTGCACTCAGCTTTAATGCTGTA-TTTTTATCATAGCATTCCA  748

seq1  TATATTTGGTCATTTGTCAA-CCAACCA-CTAATTTTAAAGTATCTATTT  797
       |||||||| |||| ||||| ||||||| ||||||||||||| ||  |||
seq2  AATATTTGGGCATTGGTCAACCCAACCACCTAATTTTAAAGTTTCATTTT  798

seq1  TTATTACGC  806
      |||||||||
seq2  TTATTACGC  807

seq1: chr4_91963801_91964799
seq2: B6Ng01-022A22.g_67_1067 (reverse)

seq1  GCATAACAAACAACTTTTTC-TTATGA-GTTTATATAAGAAACAGGTAGA  48
      |||||||||||||||||||| |||||| |||||||| ||||||||  |||
seq2  GCATAACAAACAACTTTTTCTTTATGAGGTTTATAT-AGAAACAGTGAGA  49

seq1  T-TAATATAGATGT-ATAG-ATTTTAT-ATTTATATTTTTCCCTTACCAT  94
      | |||||  ||||| |||| ||||||| ||||||||||||||||||||||
seq2  TATAATA-GGATGTAATAGAATTTTATAATTTATATTTTTCCCTTACCAT  98

seq1  CTTTGGTCAGGAACATTTGTTTTATGCAGCAATATAACAACAACAATAAC  144
      | |||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  C-TTGGTCAGGAACATTTGTTTTATGCAGCGATATAAC-ACAACAATAAC  146

seq1  AAACAAACAAACACAGGGAAAAGAGTGAACACCCTAATGATAGTGTTATC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACACAGGGAAAAGAGTGAACACCCTAATGATAGTGTTATC  196

seq1  TGAAATCCACACATGCAGCAGCAAACACATCAAGGTAAACTATAAAAGGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCACACATGCAGCAGCAAACACATCAAGGTAAACTATAAAAGGA  246

seq1  ACCAATAATTCAGTTGAATACAATTCTTACATATTAATGAAAATTCAGTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATAATTCAGTTGAATACAATTCTTACATATTAATGAAAATTCAGTC  296

seq1  ATCACATGTAATAGCAATTGAAATCTTAAAAAAAACTAAGATAGTATTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGTAATAGCAATTGAAATCTTAAAAAAAACTAAGATAGTATTAA  346

seq1  AACTGGAATATTTGCATGTAAATATAATAAATTATGTCAAAATCTCTTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAATATTTGCATGTAAATATAATAAATTATGTCAAAATCTCTTTT  396

seq1  AAATACTAGAAAATGTTAGTAAAAATACCAAAGTATATTAAAACATTTGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAGAAAATGTTAGTAAAAATACCAAAGTATATTAAAACATTTGG  446

seq1  AAGGTTGCAATATATTATGTATATTGGAAAGAAATCAATGAGGAAATGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGCAATATATTATGTATATTGGAAAGAAATCAATGAGGAAATGAG  496

seq1  ATAATTCTGCCTTGATTGATCTATAGACTTAATCCATATCAATCCACACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTGCCTTGATTGATCTATAGACTTAATCCATATCAATCCACACC  546

seq1  AAACTCAATAGAAATGCTGACAACATAAACAAAATGAGTCCAATGTGTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAATAGAAATGCTGACAACATAAACAAAATGAGTCCAATGTGTTT  596

seq1  GTGGAAGAACAAAGGAATGCATGTGTGAGCTACATTAACTGGACACAGTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAACAAAGGAATGCATGTGTGAGCTACATTAACTGGACACAGTA  646

seq1  GGCTACTGAAAATGGAGGACAGGGGACATGGGGGGGTAATGGGGGCAGAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTGAAAATGGAGGACAGGGGACATGGGGGGGTAATGGGGGCAGAT  696

seq1  TCAATGAATATAGTTTTATACACGTATGGTATTTTCAAAGAATAATTACT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAATATAGTTTTATACACGTATGGTATTTTCAAAGAATAATTACT  746

seq1  GTCTTATGAAAAAGAAAACTATTGTTAAAACAACTAAATTGGTGGGATGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATGAAAAAGAAAACTATTGTTAAAACAACTAAATTGGTGGGATGC  796

seq1  CACTCAACTTAAAAATTTTTGTAAGACTGAGTTAGTTAAATATGGTTTTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACTTAAAAATTTTTGTAAGACTGAGTTAGTTAAATATGGTTTTA  846

seq1  GAAAGCAAGAAAAATTTAGCTCAAGAGAACAGAATACCTTCTATAATATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAGAAAAATTTAGCTCAAGAGAACAGAATACCTTCTATAATATT  896

seq1  CCATTTTGCTCATTCCAGAAAAACTGAAATAAAAAAGTAAGAGCCTTTTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGCTCATTCCAGAAAAACTGAAATAAAAAAGTAAGAGCCTTTTC  946

seq1  AACTGTTAATGAGGATGTTCAGGAGCTGGGACTCCTGTTTGGAAAAGCAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTAATGAGGATGTTCAGGAGCTGGGACTCCTGTTTGGAAAAGCAG  996

seq1  AATTC  999
      |||||
seq2  AATTC  1001