BAC Information

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BAC

Clone NameB6Ng01-022F08
Chromosome4 (Build37)
Map Location 86,704,710 - 86,835,017
singlet/doubletdoublet
Overlap geneSlc24a2
Upstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l
Downstream geneMllt3, BC057079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022F08.bB6Ng01-022F08.g
ACCDH854583DH854584
length889152
definitionDH854583|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F08, 5' end.DH854584|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,704,710 - 86,705,962)(86,834,866 - 86,835,017)
sequence
gaattcttctgctttgctggtgttttcataccacttgtcaatcaatcttt
tcaaaagcccaaatggaaaatccattacttcttacccctacgtgtactat
ctttttgttgttggaccctcattgaatgtcccaatttacttcccactcca
aaaccatgctttaaggtttacggtccccctaggcatcactgaatgcccca
accctagcattagccatttccttcctgcacgcctgtgtcagatacttgct
cttgttgttgtgctggtcaaagctaccttaaccagtttgctttatactgg
ttagggcaaggaaccactgtactcattttgttaattcagcctcctgcaga
gttcctggtgctctataggtgatcaacaattaaatcccctttaaagtgtt
cccgattgtctccttccagccctgtctttgttacctctgcctatgattct
tttactgctctaactctgcaggttctactactctttagtatctgttggga
ggaagtctgtgaagggaaggatgtctgtggagttactctaggaatgctgg
gtaattctttctctagtgggaggagttacttcatgcaaaagaatgagacc
tcagcacacagacagcacctagggaatgggacggaagacactgctgagaa
gagtgctacactctggctggagaacatggcggacgtgctcctggatatct
tctggactcagtggttttatgccatacagagaattggagctaaagtatat
ccagatattagacctgcacagccaggcttctaccctctgatacatgacat
aggggaaggaggatgggagagaagaaatgaaacacacaaaatctcttcat
tcaagggaaaatcaagcaagggtaacaggactgggacat
catctgattatggtttttgaattatgaaagtaatgtgtcttgagataaac
agaacaagaagacctgactgtaattttattagtagatctctgtctctctc
cttcgttccttccctccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86704710_86705962
seq2: B6Ng01-022F08.b_47_932

seq1  GAATTCTTCTGCTTTGCTGGTGTTTTCATACCACTTGTCAATCAATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCTTTGCTGGTGTTTTCATACCACTTGTCAATCAATCTTT  50

seq1  TCAAAAGCCCAAATGGAAAATCCATTACTTCTTACCCCTACGTGTACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCCCAAATGGAAAATCCATTACTTCTTACCCCTACGTGTACTAT  100

seq1  CTTTTTGTTGTTGGACCCTCATTGAATGTCCCAATTTACTTCCCACTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTGTTGGACCCTCATTGAATGTCCCAATTTACTTCCCACTCCA  150

seq1  AAACCATGCTTTAAGGTTTACGGTCCCCCTAGGCATCACTGAATGCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGCTTTAAGGTTTACGGTCCCCCTAGGCATCACTGAATGCCCCA  200

seq1  ACCCTAGCATTAGCCATTTCCTTCCTGCACGCCTGTGTCAGATACTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGCATTAGCCATTTCCTTCCTGCACGCCTGTGTCAGATACTTGCT  250

seq1  CTTGTTGTTGTGCTGGTCAAAGCTACCTTAACCAGTTTGCTTTATACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGTTGTGCTGGTCAAAGCTACCTTAACCAGTTTGCTTTATACTGG  300

seq1  TTAGGGCAAGGAACCACTGTACTCATTTTGTTAATTCAGCCTCCTGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCAAGGAACCACTGTACTCATTTTGTTAATTCAGCCTCCTGCAGA  350

seq1  GTTCCTGGTGCTCTATAGGTGATCAACAATTAAATCCCCTTTAAAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGGTGCTCTATAGGTGATCAACAATTAAATCCCCTTTAAAGTGTT  400

seq1  CCCGATTGTCTCCTTCCAGCCCTGTCTTTGTTACCTCTGCCTATGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGATTGTCTCCTTCCAGCCCTGTCTTTGTTACCTCTGCCTATGATTCT  450

seq1  TTTACTGCTCTAACTCTGCAGGTTCTACTACTCTTTAGTATCTGTTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGCTCTAACTCTGCAGGTTCTACTACTCTTTAGTATCTGTTGGGA  500

seq1  GGAAGTCTGTGAAGGGAAGGATGTCTGTGGAGTTACTCTAGGAATGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTGTGAAGGGAAGGATGTCTGTGGAGTTACTCTAGGAATGCTGG  550

seq1  GTAATTCTTTCTCTAGTGGGAGGAGTTACTTCATGCAAAAGAATGAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTTTCTCTAGTGGGAGGAGTTACTTCATGCAAAAGAATGAGACC  600

seq1  TCAGCACACAGACAGCACCTAGGGAATGGGACGGAAGACACTGCTGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACACAGACAGCACCTAGGGAATGGGACGGAAGACACTGCTGAGAA  650

seq1  GAGTGCTACACTCTGGCTGGAGAACATGGCGGACGTGCTCCTGGATATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTACACTCTGGCTGGAGAACATGGCGGACGTGCTCCTGGATATCT  700

seq1  TCTGGACTCAGTGG-TTTATGCCATACAGAGAATTGGAGCTAAAGTATAT  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTGGACTCAGTGGTTTTATGCCATACAGAGAATTGGAGCTAAAGTATAT  750

seq1  CCAGATATTAGACCTGCACAGCCAGGCTTCTACCCTCTGATACATGACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATATTAGACCTGCACAGCCAGGCTTCTACCCTCTGATACATGACAT  800

seq1  AGGGGAAGGAGGATGGGAGAGAAGAAAATGAAACACACAAAAATCTCATC  849
      |||||||||||||||||||||||| ||||||||||||| |||||||| ||
seq2  AGGGGAAGGAGGATGGGAGAGAAG-AAATGAAACACAC-AAAATCTCTTC  848

seq1  ATTCAAGGGAAAATCAAGGCAAAGGGTAACATGGACTGGGAACATTCGAG  899
      ||||||||||||||||||   |||||||||| |||||||||         
seq2  ATTCAAGGGAAAATCAAG--CAAGGGTAACA-GGACTGGGA---------  886

seq1  AGGGACTAAGAATAGTGATTCCAGGGTAAGAAGACACAAGAGAAAAGCCG  949
                                                        
seq2  --------------------------------------------------  886

seq1  CCAATTCTCTGATGCAGAAGTAACGGAGAGAAGCAAGCATCCGTGGGATT  999
                                                        
seq2  --------------------------------------------------  886

seq1  GTAGGTCCTTTAGGGCAGTATTGTCCTGGATGCGATTTCACTACGTACTT  1049
                                                        
seq2  --------------------------------------------------  886

seq1  AGCTCCCAACCACAGCAGAAATATGCAGCCCACACGAAGACAAACGTAGA  1099
                                                        
seq2  --------------------------------------------------  886

seq1  AGACTGGATTAAAAGTTGGAGGAAGACTAACATGATTCCCTAAGATTTCA  1149
                                                        
seq2  --------------------------------------------------  886

seq1  TCATCCGTTCTAAGTGTAACCCCATTCATTGGACTGACTTCTTTAAATAC  1199
                                                        
seq2  --------------------------------------------------  886

seq1  TCTTCTATGTGATTGGGGCCCTACAGATGGATGACTGAAGATAGAGGACT  1249
                                                        
seq2  --------------------------------------------------  886

seq1  GGGA  1253
          
seq2  ----  886

seq1: chr4_86834866_86835017
seq2: B6Ng01-022F08.g_73_224 (reverse)

seq1  CACACACACACACACACACACACACACACACACAGGGAGGGAAGGAACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACAGGGAGGGAAGGAACGA  50

seq1  AGGAGAGAGACAGAGATCTACTAATAAAATTACAGTCAGGTCTTCTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGACAGAGATCTACTAATAAAATTACAGTCAGGTCTTCTTGTT  100

seq1  CTGTTTATCTCAAGACACATTACTTTCATAATTCAAAAACCATAATCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATCTCAAGACACATTACTTTCATAATTCAAAAACCATAATCAGA  150

seq1  TG  152
      ||
seq2  TG  152