BAC Information

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BAC

Clone NameB6Ng01-022H22
Chromosome4 (Build37)
Map Location 118,824,029 - 118,964,476
singlet/doubletdoublet
Overlap geneZfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1
Upstream geneJmjd2a, Ptprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1
Downstream genePpih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3, Edn2, Foxo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022H22.bB6Ng01-022H22.g
ACCDH854691DH854692
length162654
definitionDH854691|Mus musculus domesticus DNA, BAC clone: B6Ng01-022H22, 5' end.DH854692|Mus musculus domesticus DNA, BAC clone: B6Ng01-022H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,964,315 - 118,964,476)(118,824,029 - 118,824,682)
sequence
gaattctggattatatattctaggttctttagctattttataaactacgt
ggaagatttcatttctgcctttagagagaggtttgttgactggtgaattc
ttacaacttggtcagaaatctttgtcctaaggcttttcttttgttttttt
ggggggggggga
gaattcaacgtagaggagagtgacagattcagtgaaggattcagtgaagg
accccaagaacttgccagcaagagaagccagggtgacctgtatctggggt
gtgggtttctgctgcctgttacttaattgcccgtccagagagactcactc
tttctagactctcaatccacacatctatactgcacttggctgtaaaagtc
ccagaggtcaacctcttgtcccaggcatggcaaaagaaaacgtcaccttc
ccttggcctcagagatcattgagaatagacccatagtctagtaagactga
tgagaggcaaggattgttttgtgggaagagctgagaaagtgccagtcaca
ttctcttctcagctatattgagcccagagggacaactccaacctttacgc
aggagaagagaaggccgaatgaatggagccaacgtgaacagacaggctaa
cagagagtggggcttgggtctttagtcaccatgcctgaagccagcctttc
actgaagagccaagaaactgcctttcccagggctgaaatgagctgtttag
ctaaagattcaaagcatgatgcgtataagcaaacctggatgaactgtccc
caggttacctgtcagtagctatgtgtttggtggctgcgggggtgtgggtg
ggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118964315_118964476
seq2: B6Ng01-022H22.b_43_204 (reverse)

seq1  TCCCCCCCCCCCAAAAAAACAAAAGAAAAGCCTTAGGACAAAGATTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCAAAAAAACAAAAGAAAAGCCTTAGGACAAAGATTTCTG  50

seq1  ACCAAGTTGTAAGAATTCACCAGTCAACAAACCTCTCTCTAAAGGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTGTAAGAATTCACCAGTCAACAAACCTCTCTCTAAAGGCAGAA  100

seq1  ATGAAATCTTCCACGTAGTTTATAAAATAGCTAAAGAACCTAGAATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCTTCCACGTAGTTTATAAAATAGCTAAAGAACCTAGAATATAT  150

seq1  AATCCAGAATTC  162
      ||||||||||||
seq2  AATCCAGAATTC  162

seq1: chr4_118824029_118824682
seq2: B6Ng01-022H22.g_66_719

seq1  GAATTCAACGTAGAGGAGAGTGACAGATTCAGTGAAGGATTCAGTGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGTAGAGGAGAGTGACAGATTCAGTGAAGGATTCAGTGAAGG  50

seq1  ACCCCAAGAACTTGCCAGCAAGAGAAGCCAGGGTGACCTGTATCTGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAGAACTTGCCAGCAAGAGAAGCCAGGGTGACCTGTATCTGGGGT  100

seq1  GTGGGTTTCTGCTGCCTGTTACTTAATTGCCCGTCCAGAGAGACTCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTCTGCTGCCTGTTACTTAATTGCCCGTCCAGAGAGACTCACTC  150

seq1  TTTCTAGACTCTCAATCCACACATCTATACTGCACTTGGCTGTAAAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGACTCTCAATCCACACATCTATACTGCACTTGGCTGTAAAAGTC  200

seq1  CCAGAGGTCAACCTCTTGTCCCAGGCATGGCAAAAGAAAACGTCACCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGTCAACCTCTTGTCCCAGGCATGGCAAAAGAAAACGTCACCTTC  250

seq1  CCTTGGCCTCAGAGATCATTGAGAATAGACCCATAGTCTAGTAAGACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCCTCAGAGATCATTGAGAATAGACCCATAGTCTAGTAAGACTGA  300

seq1  TGAGAGGCAAGGATTGTTTTGTGGGAAGAGCTGAGAAAGTGCCAGTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCAAGGATTGTTTTGTGGGAAGAGCTGAGAAAGTGCCAGTCACA  350

seq1  TTCTCTTCTCAGCTATATTGAGCCCAGAGGGACAACTCCAACCTTTACGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTCAGCTATATTGAGCCCAGAGGGACAACTCCAACCTTTACGC  400

seq1  AGGAGAAGAGAAGGCCGAATGAATGGAGCCAACGTGAACAGACAGGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGAGAAGGCCGAATGAATGGAGCCAACGTGAACAGACAGGCTAA  450

seq1  CAGAGAGTGGGGCTTGGGTCTTTAGTCACCATGCCTGAAGCCAGCCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTGGGGCTTGGGTCTTTAGTCACCATGCCTGAAGCCAGCCTTTC  500

seq1  ACTGAAGAGCCAAGAAACTGCCTTTCCCAGGGCTGAAATGAGCTGTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAGCCAAGAAACTGCCTTTCCCAGGGCTGAAATGAGCTGTTTAG  550

seq1  CTAAAGATTCAAAGCATGATGCGTATAAGCAAACCTGGATGAACTGTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGATTCAAAGCATGATGCGTATAAGCAAACCTGGATGAACTGTCCC  600

seq1  CAGGTTACCTGTCAGTAGCTATGTGTTTGGTGGCTGCGGGGGTGTGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTACCTGTCAGTAGCTATGTGTTTGGTGGCTGCGGGGGTGTGGGTG  650

seq1  GGTG  654
      ||||
seq2  GGTG  654