BAC Information

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BAC

Clone NameB6Ng01-022L10
Chromosome4 (Build37)
Map Location 98,768,282 - 98,868,067
singlet/doubletdoublet
Overlap geneDock7, LOC665193, Atg4c
Upstream geneNfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl, L1td1, Ankrd38, LOC100039541, Usp1, Angptl3
Downstream geneLOC665212, LOC638890, LOC100042589, Foxd3, Alg6, Itgb3bp, BC020077, Pgm2, Ror1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022L10.bB6Ng01-022L10.g
ACCDH854844DH854845
length1,0921,034
definitionDH854844|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L10, 5' end.DH854845|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,768,282 - 98,769,384)(98,867,036 - 98,868,067)
sequence
gaattccaggacagccagggctacacagacaaaccctgtctccaaaaaaa
aaaaaaaaaaaggaaaggagagagagagatagctcagtggttaagagcac
tgactgctcttccagaggtcctgagttcaattcccagcaaccacatgctg
actcacagccatctgcaatgggatctgacgccctcttctggtgtgtctga
agacagctacagtgtactcatctacataaaataaataaataaatcttttt
aaaaattatctctctcattactactttcaaatccacagtgaaatctctca
aatgtaaacctttaaccatttaataccttcacggatatacttcatacaaa
aaaaaaaaataagaaagagcaaatcattatttttttaggtgtgtatgcat
tatactcactaccttttcttcataagttatatttggaaatctttcccaat
cagcacataaaattaataatacaagcaaaatctgtcaagcacttacagtg
tgtcaaataaaaagttatatttaatattcaggaacaccccatgaagcaag
aactatataaggatattgaagcttcaaggtcattatggttacataattaa
ctagcaatgaagccaagatgtgaacatagcgaatccacaggtaaccactg
ctaacctgctctacagtccattctgcagataaactgaagtgtatgtaaca
agcctctgtcagtgaacattgggctacttctagttttccccaacattatc
actagaatgctcctgcaaacattttttcctaaatggagaattatgggtta
cttttgtctttcttctgggcctctcatatttccaaattttctgaacaaat
tatttcatgagaaaaataggttcagaaactataaaataacaggcactaaa
atgatagggacaaggtttagttcaaatctataactatttataggcctagc
tataaatagtgtcattttagcactttaagtgagcaaggtggatgcataag
tttcagctgcttgaactacagtaggacactacctcaaaaagaaaaaatcg
tggggggaagagggcgtaaatgtggtaattaacacaggtata
gaattcttaaatcatggagggaagtcaaggcagcagctaaagggaactaa
accaggaggtgggaactaaaccaggaggtgggaactaaaccaggaggtgg
gaactaaaccaggaggtgggaactaaaccaggaggtgggaactaaaccag
gaggtgggaactaaaccaggaggtgggaactaaaccaggaggtgggaact
aaaccaggaggtgggaactaaaccaggaggtgggaactaaaccaggaggt
gggaactaaaccaggaggtgggaactaaaccaggaggtgggaactaaacc
aggaggtgggaactaaaccaggaggtgggaactaaaccaggaggtgggaa
ctaaaccaggaggtgggaactaaagcagaaaccatgacgaaacatcgact
gctggcttgcttctctacaccacacacaaatacctgccctacagtagcac
tgcccagtgggacgggccctcccacatcaattatcaatcaaggaaaccac
ctgcccatgcccataggtcagtctattgaaggcaactcctcaactcctca
actgaggttccctcttcccaggcaacaataaagctaaccaggacacccag
aacctaattgttatgaggtgataagacttatcaattctgtgaggtactct
cagcaaaaataattggtttgtactcacaaaaaatatcaattgactttaaa
aatgagaacagaagagaaggagggagcaagcaggagagggggagaagatg
ttctctgtaaaaaaagaaaagagagacggctgggagaagcaactgcccac
acgcacagtgccagatgcccctaggtctgcgttccagcactgtcaaagga
taaagagaagagaaaacagaaaggtgacaactcatatatcctatgaagta
taactagattttattgtttttttaaagctatggtggatattgttgtcttg
tttgggaaaatcggggttttgaatttgaaaatccatagactagcattaag
gttgcggtgctatgggcatactaccggggcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_98768282_98769384
seq2: B6Ng01-022L10.b_47_1138

seq1  GAATTCCAGGACAGCCAGGGCTACACAGACAAACCCTGTCTCCAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGACAAACCCTGTCTCCAAAAAAA  50

seq1  AAAAAAAAAAAGGAAAGGAGAGAGAGAGATAGCTCAGTGGTTAAGAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGGAAAGGAGAGAGAGAGATAGCTCAGTGGTTAAGAGCAC  100

seq1  TGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGCTG  150

seq1  ACTCACAGCCATCTGCAATGGGATCTGACGCCCTCTTCTGGTGTGTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGCCATCTGCAATGGGATCTGACGCCCTCTTCTGGTGTGTCTGA  200

seq1  AGACAGCTACAGTGTACTCATCTACATAAAATAAATAAATAAATCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTACAGTGTACTCATCTACATAAAATAAATAAATAAATCTTTTT  250

seq1  AAAAATTATCTCTCTCATTACTACTTTCAAATCCACAGTGAAATCTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATCTCTCTCATTACTACTTTCAAATCCACAGTGAAATCTCTCA  300

seq1  AATGTAAACCTTTAACCATTTAATACCTTCACGGATATACTTCATACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAACCTTTAACCATTTAATACCTTCACGGATATACTTCATACAAA  350

seq1  AAAAAAAAATAAGAAAGAGCAAATCATTATTTTTTTAGGTGTGTATGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATAAGAAAGAGCAAATCATTATTTTTTTAGGTGTGTATGCAT  400

seq1  TATACTCACTACCTTTTCTTCATAAGTTATATTTGGAAATCTTTCCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCACTACCTTTTCTTCATAAGTTATATTTGGAAATCTTTCCCAAT  450

seq1  CAGCACATAAAATTAATAATACAAGCAAAATCTGTCAAGCACTTACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATAAAATTAATAATACAAGCAAAATCTGTCAAGCACTTACAGTG  500

seq1  TGTCAAATAAAAAGTTATATTTAATATTCAGGAACACCCCATGAAGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATAAAAAGTTATATTTAATATTCAGGAACACCCCATGAAGCAAG  550

seq1  AACTATATAAGGATATTGAAGCTTCAAGGTCATTATGGTTACATAATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATAAGGATATTGAAGCTTCAAGGTCATTATGGTTACATAATTAA  600

seq1  CTAGCAATGAAGCCAAGATGTGAACATAGCGAATCCACAGGTAACCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAATGAAGCCAAGATGTGAACATAGCGAATCCACAGGTAACCACTG  650

seq1  CTAACCTGCTCTACAGTCCATTCTGCAGATAAACTGAAGTGTATGTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTGCTCTACAGTCCATTCTGCAGATAAACTGAAGTGTATGTAACA  700

seq1  AGCCTCTGTCAGTGAACATTGGGCTACTTCTAGTTTTCCCCAACATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGTCAGTGAACATTGGGCTACTTCTAGTTTTCCCCAACATTATC  750

seq1  ACTAGAATGCTCCTGCAAACATTTTTTCCTAAATGGAGAATTATGGGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAATGCTCCTGCAAACATTTTTTCCTAAATGGAGAATTATGGGTTA  800

seq1  CTTTTGTCTTTCTTCTGGGCCTCTCATATTTCCAAATTTTCTGAAACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTTTGTCTTTCTTCTGGGCCTCTCATATTTCCAAATTTTCTG-AACAAA  849

seq1  TTATTTCATGAGAAAAATAGGTTCAGAAACTATAAAATAACAGGCACTAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTATTTCATGAGAAAAATAGGTTCAGAAACTATAAAATAACAGGCACT-A  898

seq1  AAATGATAGGGACAAGGTTTAAGTTCAAATCTATAACTATTTATAGGCCT  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATGATAGGGACAAGGTTT-AGTTCAAATCTATAACTATTTATAGGCCT  947

seq1  AGCTATAAATAGTTGTCATTTTAGCACTTTAAAGGTGGAGGCAGGTGGAT  1000
      |||||||||||| |||||||||||||||||||  || |||  ||||||||
seq2  AGCTATAAATAG-TGTCATTTTAGCACTTTAA--GT-GAGCAAGGTGGAT  993

seq1  TGCCATAAGTTCCAGGCTGCTTGAACTACAGTAAGACACTACCTCAAAAA  1050
         |||||||| || |||||||||||||||||| ||||||||||||||||
seq2  --GCATAAGTTTCA-GCTGCTTGAACTACAGTAGGACACTACCTCAAAAA  1040

seq1  GAAAAAAGTCGTGGGGGGAGAGGGGCGTAATATGT-GTATATAACACAGG  1099
      ||||||| |||||||||||   |||||||| |||| |||  |||||||||
seq2  GAAAAAA-TCGTGGGGGGAAGAGGGCGTAA-ATGTGGTAATTAACACAGG  1088

seq1  TATA  1103
      ||||
seq2  TATA  1092

seq1: chr4_98867036_98868067
seq2: B6Ng01-022L10.g_68_1101 (reverse)

seq1  CCAAGCCACCGTTAGTATG-CCATAGCACCGCAACCTTAATGCTA-TCTA  48
      ||||||| ||| ||||||| ||||||||||||||||||||||||| ||||
seq2  CCAAGCC-CCGGTAGTATGCCCATAGCACCGCAACCTTAATGCTAGTCTA  49

seq1  TTGGATTTTCAATATTCAAAACCCCGATTTTCCCAAACAAGACAACAATA  98
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  -TGGATTTTCAA-ATTCAAAACCCCGATTTTCCCAAACAAGACAACAATA  97

seq1  T-CACCATAGCTTTAAAAAAACAAT-AAATCTAGTTATACTTCATAGGAT  146
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCACCATAGCTTTAAAAAAACAATAAAATCTAGTTATACTTCATAGGAT  147

seq1  ATATTGAGTTGTCACCTTTCTGTTTTCTCTTCTCTTTATCCTTTTGCAGT  196
      ||| ||||||||||||||||||||||||||||||||||||||||  ||||
seq2  ATA-TGAGTTGTCACCTTTCTGTTTTCTCTTCTCTTTATCCTTTGACAGT  196

seq1  GCTGGAACGCAGACCTA-GGGCATCTGGC-CTGTGCGTGTGGGCAGTTGC  244
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  GCTGGAACGCAGACCTAGGGGCATCTGGCACTGTGCGTGTGGGCAGTTGC  246

seq1  TTCTCCCAGCCGTCTCTCTTTTCTTTTTTTACAGAGAACATCTTCTCCCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAGCCGTCTCTCTTTTCTTTTTTTACAGAGAACATCTTCTCCCC  296

seq1  CTCTCCTGCTTGCTCCCTCCTTCTCTTCTGTTCTCATTTTTAAAGTCAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGCTTGCTCCCTCCTTCTCTTCTGTTCTCATTTTTAAAGTCAAT  346

seq1  TGATATTTTTTGTGAGTACAAACCAATTATTTTTGCTGAGAGTACCTCAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTTTTGTGAGTACAAACCAATTATTTTTGCTGAGAGTACCTCAC  396

seq1  AGAATTGATAAGTCTTATCACCTCATAACAATTAGGTTCTGGGTGTCCTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGATAAGTCTTATCACCTCATAACAATTAGGTTCTGGGTGTCCTG  446

seq1  GTTAGCTTTATTGTTGCCTGGGAAGAGGGAACCTCAGTTGAGGAGTTGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTTTATTGTTGCCTGGGAAGAGGGAACCTCAGTTGAGGAGTTGAG  496

seq1  GAGTTGCCTTCAATAGACTGACCTATGGGCATGGGCAGGTGGTTTCCTTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCTTCAATAGACTGACCTATGGGCATGGGCAGGTGGTTTCCTTG  546

seq1  ATTGATAATTGATGTGGGAGGGCCCGTCCCACTGGGCAGTGCTACTGTAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAATTGATGTGGGAGGGCCCGTCCCACTGGGCAGTGCTACTGTAG  596

seq1  GGCAGGTATTTGTGTGTGGTGTAGAGAAGCAAGCCAGCAGTCGATGTTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTATTTGTGTGTGGTGTAGAGAAGCAAGCCAGCAGTCGATGTTTC  646

seq1  GTCATGGTTTCTGCTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTTTCTGCTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCT  696

seq1  GGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCC  746

seq1  ACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTT  796

seq1  AGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTC  846

seq1  CTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTC  896

seq1  CCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGT  946

seq1  TTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCTTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCCACCTCCTGGTTTAGTTCCCACCTCCTGGTTTAGTTCCCTTT  996

seq1  AGCTGCTGCCTTGACTTCCCTCCATGATTTAAGAATTC  1032
      ||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGCCTTGACTTCCCTCCATGATTTAAGAATTC  1034