BAC Information

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BAC

Clone NameB6Ng01-022N18
Chromosome4 (Build37)
Map Location 96,193,051 - 96,194,157
singlet/doubletsinglet
Overlap geneCyp2j6
Upstream gene2310009E04Rik, Hook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095
Downstream geneCyp2j9, Cyp2j5, LOC100039415, LOC620779, LOC620883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022N18.bB6Ng01-022N18.g
ACCDH854948DH854949
length1,100569
definitionDH854948|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N18, 5' end.DH854949|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaacagggcaccaagaaatttctcatctgatagcaacaattt
tctgtctcatagatggaaaagctttgttttctcttcatgtcatagaaaaa
ataactatcttatgtaattttttaaaaaataatactcttcagtggagggt
tcttatggcatgatagtggaggtcaaagggcatcttgttgtagctctttc
tcttctaccatgaggtttttgggaactacacttatggcagatgagttatt
aacaagattctttgtctctttgcctgtctcccttgtttcttctgtatttc
tttcaaaggcattaattcccttcttaggactaatcaacttctaacatcat
accattggtaataaggttgtaataagtaaattaatggagaatgcataaat
attcacaccacaataaatcagtagactataatttcttaagatattgttgg
acaacactgttaaagaaattcttaacagttcagattccacatctgactaa
tgagaataattatgtcttatccaaaatacagtttgaaatttctatgcata
agtagattcatactaataaatagtaatgattgttagctatcttccaaaat
gtcagtacaggttgaacagttatccagtgggaaattcttaacttctggaa
tgtgtagtcagtcaatgatcatgtgactaagttttggcaagtaaaacaca
aacagacagctgatcccagtggcatatccctttaatcccaatatttgtga
gacagggtagttaggtctctgagttccaggacagcttggttaacaaaatg
agttctgtgacaatctgggctacacagtgaaagcctgccttgaaaagtca
aaaatttgtaaataaacacatttttttcatctttggaacatggtctgata
caacaggtgtctacttttctcttttcccttctagggaaaggagtactcag
gttgcccacttacagagagctagctttactttagccttcattcagcaaca
atttaaagggaatttgtaaaaaaagctaatacaaaatccagcttaaggat
gttcctgacggagaaataaatgtctagcatttacactacggtcttacaaa


taggacagccagagctatacagagaaaccctgtcttgaaaaaccaaaaaa
taaataaataaataaataaataaataaaagaattttttcattgttttctt
taaggacctctttcattttcatatagttggttttaaggttttttttttct
tgtgcttcagctatgtttgaatatttagagcctgctgtggtaggatagct
gggctctagtggggataaatattcccatagtatctaggcaattgtgtttg
ggatgattataagtctaggtgttaatttctgaatttgtctttttcaggtg
ggtggtttttgtttttgttgtttctccccccccccccccttggttttctg
ctttagagagggagagtaatggttttgttttgcctgtgttcctggcctga
tcagctgatgtattcacaggcaatgcctgctgatgttggtgaaagacttg
gggagggaaggttggagaaattctttgtgatctcttgtgtcaatagtgtc
agagaggaaagggagaccaccacagcaagtttttccaccactgaggtaga
gatgataatggtcacctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_96193051_96194157
seq2: B6Ng01-022N18.b_47_1146

seq1  GAATTCTAAAACAGGGCACCAAGAAATTTCTCATCTGATAGCAACAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACAGGGCACCAAGAAATTTCTCATCTGATAGCAACAATTT  50

seq1  TCTGTCTCATAGATGGAAAAGCTTTGTTTTCTCTTCATGTCATAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCATAGATGGAAAAGCTTTGTTTTCTCTTCATGTCATAGAAAAA  100

seq1  ATAACTATCTTATGTAATTTTTTAAAAAATAATACTCTTCAGTGGAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATCTTATGTAATTTTTTAAAAAATAATACTCTTCAGTGGAGGGT  150

seq1  TCTTATGGCATGATAGTGGAGGTCAAAGGGCATCTTGTTGTAGCTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGGCATGATAGTGGAGGTCAAAGGGCATCTTGTTGTAGCTCTTTC  200

seq1  TCTTCTACCATGAGGTTTTTGGGAACTACACTTATGGCAGATGAGTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACCATGAGGTTTTTGGGAACTACACTTATGGCAGATGAGTTATT  250

seq1  AACAAGATTCTTTGTCTCTTTGCCTGTCTCCCTTGTTTCTTCTGTATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATTCTTTGTCTCTTTGCCTGTCTCCCTTGTTTCTTCTGTATTTC  300

seq1  TTTCAAAGGCATTAATTCCCTTCTTAGGACTAATCAACTTCTAACATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGCATTAATTCCCTTCTTAGGACTAATCAACTTCTAACATCAT  350

seq1  ACCATTGGTAATAAGGTTGTAATAAGTAAATTAATGGAGAATGCATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGGTAATAAGGTTGTAATAAGTAAATTAATGGAGAATGCATAAAT  400

seq1  ATTCACACCACAATAAATCAGTAGACTATAATTTCTTAAGATATTGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACCACAATAAATCAGTAGACTATAATTTCTTAAGATATTGTTGG  450

seq1  ACAACACTGTTAAAGAAATTCTTAACAGTTCAGATTCCACATCTGACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTGTTAAAGAAATTCTTAACAGTTCAGATTCCACATCTGACTAA  500

seq1  TGAGAATAATTATGTCTTATCCAAAATACAGTTTGAAATTTCTATGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATAATTATGTCTTATCCAAAATACAGTTTGAAATTTCTATGCATA  550

seq1  AGTAGATTCATACTAATAAATAGTAATGATTGTTAGCTATCTTCCAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTCATACTAATAAATAGTAATGATTGTTAGCTATCTTCCAAAAT  600

seq1  GTCAGTACAGGTTGAACAGTTATCCAGTGGGAAATTCTTAACTTCTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTACAGGTTGAACAGTTATCCAGTGGGAAATTCTTAACTTCTGGAA  650

seq1  TGTGTAGTCAGTCAATGATCATGTGACTAAGTTTTGGCAAGTAAAACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGTCAGTCAATGATCATGTGACTAAGTTTTGGCAAGTAAAACACA  700

seq1  AACAGACAGCTGATCCCAGTGGCATATCCCTTTAATCCCAATATTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAGCTGATCCCAGTGGCATATCCCTTTAATCCCAATATTTGTGA  750

seq1  GACAGGGTAGTTAGGTCTCTGAGTTCCAGGACAGCTTGGTTAACAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTAGTTAGGTCTCTGAGTTCCAGGACAGCTTGGTTAACAAAATG  800

seq1  AGTTCTGTGACAATCTGGGCTACACAGTGAAAGCCTGCCTTGAAAAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTGACAATCTGGGCTACACAGTGAAAGCCTGCCTTGAAAAGTCA  850

seq1  AAAATTTGTAAATAAACACATTTTTTTCATCTTTGGAACATGGTCTGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGTAAATAAACACATTTTTTTCATCTTTGGAACATGGTCTGATA  900

seq1  CAACAGGGTGTCTACTTTTCTCTTTTCCCTTCTAGGGAAAGGAGTACTCA  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACA-GGTGTCTACTTTTCTCTTTTCCCTTCTAGGGAAAGGAGTACTCA  949

seq1  GGGTTGCCCACTTACAGAGAGCTAAGCTTTACTTTAGCTTCAATTCAGCA  1000
       |||||||||||||||||||||| |||||||||||||| |  ||||||||
seq2  -GGTTGCCCACTTACAGAGAGCT-AGCTTTACTTTAGCCTTCATTCAGCA  997

seq1  ACAATTTAAAGGGAATTTGTAACAAAAAGCCTATTACAAAATCCAGCTTA  1050
      |||||||||||||||||||||| |||||| ||| ||||||||||||||||
seq2  ACAATTTAAAGGGAATTTGTAA-AAAAAG-CTAATACAAAATCCAGCTTA  1045

seq1  GAGATTTGTCCTGACAGAGAAATAAATGTCTAGCAATTACACTACTGTCT  1100
        ||| | ||||||| ||||||||||||||||||| ||||||||| ||||
seq2  AGGATGT-TCCTGACGGAGAAATAAATGTCTAGCATTTACACTACGGTCT  1094

seq1  ATACAAA  1107
       ||||||
seq2  -TACAAA  1100


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