BAC Information

Click to search

BAC

Clone NameB6Ng01-023A24
Chromosome4 (Build37)
Map Location 54,956,500 - 54,957,490
singlet/doubletsinglet
Overlap geneEG666920
Upstream geneLOC100041280, LOC666901, LOC100041303, LOC384018
Downstream geneZfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023A24.bB6Ng01-023A24.g
ACCDH855090DH855091
length1,072991
definitionDH855090|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A24, 5' end.DH855091|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatctcttaattgggagggcctgccgtgacggcttgaagtctgta
agctacaacctcttttttggtcatctaaagcattatagtatagtagaccc
tcccccaatttaaaaaaatctagtagcttaaaagggaccaattccactgt
gtctcacaagtctacaaaactagtggtcttggctggacagttcttttact
ggtcttgctagtgattacccatgaggcttttgccattgagatctgaggtc
catgggaatgctggaatcattgggtctcttctctttccctgtcacctcgg
tcctgctctttccacatgccttttgacaaagtttccagcagtgcacgcag
atccctaacaaggagggactgggcttctcagaatacagtggaagccatta
agtctggatcttatgcctagaagacttgatatcacttcttgtacagtctg
agactgaaagcataactcagtgtcaaggaccagcctcggcttggagcagg
gttgtgaaaaaggggagtctgtgaacagtgaaacaaacaacctgaagtca
aatcatgggtccaagctgctggagacagctttccagcctgcttttctctc
tgatctgctttctttctctctgatctgcttttctctggagatctccagac
cacccccccccctctctctctgttctgcttgagacagttctccaagcagt
tctctcttgctattctaaaaaattctctggatagttcatctcctgcagat
cataagcccagtcttttatttacatagtcatccagtcatttgctttccag
tttccttttgattccctatgaatcagcatcctgagattccagccccttaa
ttcttaggagacagcaagcgcacattttcttttaacattgcaaaagaatt
cataagactgtctgcttctggttatgcacagacaataaactagtgggtgt
gacctgatcctgagataccattccaccacattggaactaaatcgatctat
ccagcggaccttggcttcaggaacgctgcctgctgtctggctggctgcca
ccgcctgctttgaacttctaaa
gaattctttgaattctagctctatgaattagaattctggaaaaaatatgt
gtgtgtatatatatatatatatatatatatatatatatgcatcattattc
aaatgatgaaattagaatagcttcaattatttctgttgaaattcttttta
atatagactgtggcccaacagtttttgtttaagtctctcctatagaatta
atagaagcccctttccctcgataaacacttttctttaagaaattgggtgt
cttctttttatttgaaaaggccttattaagcaaaatgatttatagactat
ccccatcctcctagtgtcaggcaagtatgaaggtcctagttgctcaggtc
accccggttacaggagttccgcttcttgaactaaaattgcaagatttatt
attctattaatgttcataaagtcactcttttgatgagccataatttctct
ttatgaagagtctgtgtgccagtcacttgtgacataggagaagaaaagtc
cagactttcaacatattcttattctctagaccattaataaagtcttgcaa
tcccatctgactccaggggataatggcataaggtatagtatcaaacagta
catttcagagagtcagtgtgtccatcagatatatccttcacatggatgcc
tgtgtgttaaacataaactttccccttttatattaaaaaagagaaagaaa
gaagtcaaatgccagctctcttgatggagaacacaacccactagccaagc
ttgcattatctttgtgaatatttgtagggagtgaaagagcaggaggtgtg
aaactttctcctgcttatctaaatgggcctgctaatggcaaaacctaaat
tacagtttacttaagtaccaagttataaaggcattcaccaaatcctccag
ccacgggcttccccttcaatgtcccaccttcgcccatccccacccaaacg
tgcaatttcccccactttagctttatgttccttcatttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54956500_54957490
seq2: B6Ng01-023A24.g_66_1056

seq1  GAATTCTTTGAATTCTAGCTCTATGAATTAGAATTCTGGAAAAAATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAATTCTAGCTCTATGAATTAGAATTCTGGAAAAAATATGT  50

seq1  GTGTGTATATATATATATATATATATATATATATATATGCATCATTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATATATATATATATATATATATATATATATATGCATCATTATTC  100

seq1  AAATGATGAAATTAGAATAGCTTCAATTATTTCTGTTGAAATTCTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGAAATTAGAATAGCTTCAATTATTTCTGTTGAAATTCTTTTTA  150

seq1  ATATAGACTGTGGCCCAACAGTTTTTGTTTAAGTCTCTCCTATAGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGACTGTGGCCCAACAGTTTTTGTTTAAGTCTCTCCTATAGAATTA  200

seq1  ATAGAAGCCCCTTTCCCTCGATAAACACTTTTCTTTAAGAAATTGGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCCCCTTTCCCTCGATAAACACTTTTCTTTAAGAAATTGGGTGT  250

seq1  CTTCTTTTTATTTGAAAAGGCCTTATTAAGCAAAATGATTTATAGACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTATTTGAAAAGGCCTTATTAAGCAAAATGATTTATAGACTAT  300

seq1  CCCCATCCTCCTAGTGTCAGGCAAGTATGAAGGTCCTAGTTGCTCAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCTCCTAGTGTCAGGCAAGTATGAAGGTCCTAGTTGCTCAGGTC  350

seq1  ACCCCGGTTACAGGAGTTCCGCTTCTTGAACTAAAATTGCAAGATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGGTTACAGGAGTTCCGCTTCTTGAACTAAAATTGCAAGATTTATT  400

seq1  ATTCTATTAATGTTCATAAAGTCACTCTTTTGATGAGCCATAATTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTAATGTTCATAAAGTCACTCTTTTGATGAGCCATAATTTCTCT  450

seq1  TTATGAAGAGTCTGTGTGCCAGTCACTTGTGACATAGGAGAAGAAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGAGTCTGTGTGCCAGTCACTTGTGACATAGGAGAAGAAAAGTC  500

seq1  CAGACTTTCAACATATTCTTATTCTCTAGACCATTAATAAAGTCTTGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTTCAACATATTCTTATTCTCTAGACCATTAATAAAGTCTTGCAA  550

seq1  TCCCATCTGACTCCAGGGGATAATGGCATAAGGTATAGTATCAAACAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTGACTCCAGGGGATAATGGCATAAGGTATAGTATCAAACAGTA  600

seq1  CATTTCAGAGAGTCAGTGTGTCCATCAGATATATCCTTCACATGGATGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGAGAGTCAGTGTGTCCATCAGATATATCCTTCACATGGATGCC  650

seq1  TGTGTGTTAAACATAAACTTTCCCCTTTTATATTAAAAAAGAGAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTAAACATAAACTTTCCCCTTTTATATTAAAAAAGAGAAAGAAA  700

seq1  GAAGTCAAATGCCAGCTCTCTTGATGGAGAACACAACCCACTAGCCAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAAATGCCAGCTCTCTTGATGGAGAACACAACCCACTAGCCAAGC  750

seq1  TTGCATTATCTTTGTGAATATTTGTAGGGAGTGAAAGAGCAGGAGGTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTATCTTTGTGAATATTTGTAGGGAGTGAAAGAGCAGGAGGTGTG  800

seq1  -AACTTTCTCCTGCTTATCTAAAT-GGCCTGCTAATGGCAAAACCT-AAT  847
       ||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  AAACTTTCTCCTGCTTATCTAAATGGGCCTGCTAATGGCAAAACCTAAAT  850

seq1  TACAG-TTACTTAAGTACCAAGTTTATTAAGGCATTCACCAAATCCTCCA  896
      ||||| |||||||||||||||| |||| ||||||||||||||||||||||
seq2  TACAGTTTACTTAAGTACCAAG-TTATAAAGGCATTCACCAAATCCTCCA  899

seq1  GCCACGGGGCTTCCCC-TCAATGTCCCACCTTCGCCCCACCCCCACCCCA  945
      ||||| |||||||||| ||||||||||||||||| |||| ||||| ||||
seq2  GCCAC-GGGCTTCCCCTTCAATGTCCCACCTTCG-CCCATCCCCA-CCCA  946

seq1  AACAGTGCAATTTCCCCCACTTTAGGCTTTATG-TCCTTCATTTATT  991
      ||| |||||||||||||||||||| |||||||| |||||||||||||
seq2  AAC-GTGCAATTTCCCCCACTTTA-GCTTTATGTTCCTTCATTTATT  991