BAC Information

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BAC

Clone NameB6Ng01-023C16
Chromosome4 (Build37)
Map Location 100,395,583 - 100,396,231
singlet/doubletsinglet
Overlap genenone
Upstream geneAlg6, Itgb3bp, BC020077, Pgm2, Ror1, Ube2u, LOC277707, LOC621573
Downstream geneCachd1, LOC100039747, Raver2, Jak1, E130102H24Rik, Ak3l1, LOC669460, Dnajc6, Leprot, Lepr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023C16.bB6Ng01-023C16.g
ACCDH855161DH855162
length6511,156
definitionDH855161|Mus musculus domesticus DNA, BAC clone: B6Ng01-023C16, 5' end.DH855162|Mus musculus domesticus DNA, BAC clone: B6Ng01-023C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gattccatcaaactcagaatccaacagtgccaatgcatggtcgtggtgtc
tattgcctgtgtatcctgaataactctagcatggagttgtgacagcgctt
acaaatgggactaggaactctttgagtgccttttgggctttgaggattca
ccttaacatgaaatttttgaaaaagcaatgaaagtcaacatgggtgttct
gtgtgcacgggcatgtggaggggcaggctgggtggggggagttaactagg
gttgttactgggagccacatgtgccttcccatctcttgcctccatagaaa
agagccctagttgctggacaaatggcatttggcttgttgtagccctctgt
caggatcaaggttactgcccttgtgtggagagctaagggactgaggataa
gtgtaccttttctagggagggcctagggtactgctgagggcgagctagct
atcgagctgcttcaggcatgactgaggattaagcttttcaatgggacaga
acaatcaatgtttggttctttccaacgcccttcatgagtccgtttccaat
tatatttagactgaagtgggttttctgagatgccacagaagactgcaatg
gacacagatgctgtgagcatgaaagaagggaagatatactcgggagaagt
c
gaattctcacctgaggaatattgaatggctgagaagcatctgaaaaaatg
ttcagcatccttaatcatcggggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatagctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaactactctggaaataaatctggtggctcctca
gataattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagacgttccaactcataagaaagactcatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaattgtggtacatttacacagtg
gagtactactcagctatttaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaattacaaa
ggaactcacacaatatgtgctcactgataagtggatattagcccagaaac
ttagaatacccaagatatatgatacaatttgcgaaacacatgaaactcaa
gaagaacgaagaccaaagtgtgggcactttgccccttcttagaattggga
acaaaacacccatggaaggcattacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccatctcataat
cagcctccaaatgctgacaccattgcatatagtagcaagattttgctgaa
aggaccctgatatagctgtctcttgtgaggttatgccggggcctggcaaa
tacagaagtagatgctcacagtcagctattggatggatcacagggtcccc
aatggaggagctagagaagtactcaaggagctaaagggatctgcaacctt
atagtggaacaacattatgactaccaatacccgagctcttgttctagccg
catgtgtcaaagagggtctagttgccatcactgaagaagtctattgttta
tccaagttatatacttagtacaggaaatcagggtcaaaattggaatgttg
taagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_100395583_100396231
seq2: B6Ng01-023C16.b_27_676 (reverse)

seq1  GACTTCTCCCGAGTATATCTTCCCTTCTTTCATGCTCACAGCATCTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTCCCGAGTATATCTTCCCTTCTTTCATGCTCACAGCATCTGTGT  50

seq1  CCTTTGCAGTCTTCTGTGGCATCTCAGAAAACCCACTTCAGTCTAAATAT  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCAGTCTTCTGTGGCATCTCAGAAAACCCACTTCAGTCTAAATAT  100

seq1  AATTGGGAACGGACTCCTGAAGGGCGTTGGAAAGAACCAAACATTGATTG  150
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTGGAAACGGACTCATGAAGGGCGTTGGAAAGAACCAAACATTGATTG  150

seq1  TTCTGTCCCATTGAAAAGCTTAATCCTCAGTCATGCCTGAAGCAGCTCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCCATTGAAAAGCTTAATCCTCAGTCATGCCTGAAGCAGCTCGA  200

seq1  TAGCTAGCTCGCCCTCAGCAGTACCCTAGGCCCTCCCTAGAAAAGGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGCTCGCCCTCAGCAGTACCCTAGGCCCTCCCTAGAAAAGGTACA  250

seq1  CTTATCCTCAGTCCCTTAGCTCTCCACACAAGGGCAGTAACCTTGATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCTCAGTCCCTTAGCTCTCCACACAAGGGCAGTAACCTTGATCCT  300

seq1  GACAGAGGGCTACAACAAGCCAAATGCCATTTGTCCAGCAACTAGGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGGCTACAACAAGCCAAATGCCATTTGTCCAGCAACTAGGGCTC  350

seq1  TTTTCTATGGAGGCAAGAGATGGGAAGGCACATGTGGCTCCCAGTAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATGGAGGCAAGAGATGGGAAGGCACATGTGGCTCCCAGTAACAA  400

seq1  CCCTAGTTAACTCCCCCCACCCAGCCTGCCCCTCCACATGCCCGTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTTAACTCCCCCCACCCAGCCTGCCCCTCCACATGCCCGTGCACA  450

seq1  CAGAACACCCATGTTGACTTTCATTGCTTTTTCAAAAATTTCATGTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACCCATGTTGACTTTCATTGCTTTTTCAAAAATTTCATGTTAAG  500

seq1  GTGAATCCTCAAAGCCCAAAAGGCACTCAAAGAGTTCCTAGTCCCATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCCTCAAAGCCCAAAAGGCACTCAAAGAGTTCCTAGTCCCATTTG  550

seq1  TAAGCGCTGTCACAACTCCATGCTAGAGTTATTCAGGATACACAGGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGCTGTCACAACTCCATGCTAGAGTTATTCAGGATACACAGGCAAT  600

seq1  AGACACCACGACCATGCATT-CCACTGTTGGATTCTGAGTTTGATGGAAT  649
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  AGACACCACGACCATGCATTGGCACTGTTGGATTCTGAGTTTGATGGAAT  650