BAC Information

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BAC

Clone NameB6Ng01-023F24
Chromosome4 (Build37)
Map Location 144,699,472 - 144,699,848
singlet/doubletsinglet
Overlap geneVps13d
Upstream geneLOC100041077, LOC100041144, Oog3, Oog2, C87977, Pramel5, LOC666150, LOC626995, OTTMUSG00000010537, EG627009, Pramef12, D530049N12Rik, 1700012P22Rik, Aadacl3, 9430007A20Rik, LOC100041232, LOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3
Downstream geneTnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023F24.bB6Ng01-023F24.g
ACCDH855314DH855315
length1,248371
definitionDH855314|Mus musculus domesticus DNA, BAC clone: B6Ng01-023F24, 5' end.DH855315|Mus musculus domesticus DNA, BAC clone: B6Ng01-023F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttcacgttctcctttcaaatgcattcgtgattctgacagg
ttgggagtctcagtgaggcacctttcctggtgtcccacaataaagtcctt
cccctctccaagtgaactcattcctgtaacaattatagccgttttctctg
caccgcccttatcagcaactttgatttacttgtttacatcctgtggtggc
aggaatgcaaagtggctccgaaaggctcatatatttgaatgcttagtcag
tccctagttttgagaagaattggaaggggtagcctcgtgagaggaggtgt
gtcactggggtgagtttgagatgtaaaaagtgcataccaggcctagtctc
ctttctctctgccttgggcatgcatccaagatgggatgcttccctcagct
acttctccagcaccatgcctgcctgatgccacgcttcctgcctggatggt
tatgacacaacccctgaacgtcaagtcttcagttaaatgcttccctttgt
aagtcggcttttcacagcgatagaacagtcactaaggtactgccttgtca
caaaactgaacatttttacacctgtctgctccactggttgtactgtgccg
gcagaaacctatacaagagcagtagcagtaactgtgccacagtttggatg
ctagctctcttgtgacttcctatgagaaagaaattagtgcattaaaactg
tattcagcctcactcaaatccttaggtggagggcagaaatagagccaggt
ccttagccagaaggtgacacgaatgacatctaggctggtccctaataaaa
tccctgtctcactgtaataccttgtgatcccggcctccactgtgcacatt
tttatcagcactctggttttccacactcccgccagaatgttccattaagt
tctgcttacagaatcacatagggcgggctggagagatggctcaatggtta
agatcaccgactgctcttccagagttctgagttcattcccagcaccaacc
ggggctccaacatctgtaatgggatcctatggccctctgctgggtggtct
gagagagcatggtgtaactatataaggatcattaagggctcttctggctt
aatcgaacccttgctcatacctccacaaaccatgctaaccggataactac
cacataggttttcacgcacgcagcacatgctatgaatgtctcctaggcga
gcttccttgtgtcacatccctcaccagacacttaaaaggagttagtaa
aaggacagtcggggttatacagggaaacccggtctagacaaacacagaga
aggggctggagggggggagggtagagaattattacctgtcacttctaatg
tttgtagcttgccatccttctctccttcatcaaatttggttctggacctt
tgcctatcctatacttgaaccttctccgcactttctaaggctgcacaatt
aaaagccactaggtttttgactgctgacatgaatgtcttttctgtagaga
ataattatgtaacatgttttgtatggtaatcttaagattctgagctaata
tggggtaagaaggggttcatgagtccccatttctatccgaggaactggac
aactgatggtctttgtggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_144699472_144699848
seq2: B6Ng01-023F24.g_67_443 (reverse)

seq1  GTTCCACAGAGACCATCAGTTGTCCAGTTCCTCAGATAGATGTGGGGACT  50
      |||||||| |||||||||||||||||||||||| ||||||  ||||||||
seq2  GTTCCACAAAGACCATCAGTTGTCCAGTTCCTCGGATAGAAATGGGGACT  50

seq1  CATGAACCCCTTCTTACCCCATATTAGCTCAGAATCTTAAGATTACCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCCCTTCTTACCCCATATTAGCTCAGAATCTTAAGATTACCATA  100

seq1  CAAAACATGTTACATAATTATTCTCTACAGAAAAGACATTCATGTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGTTACATAATTATTCTCTACAGAAAAGACATTCATGTCAGCA  150

seq1  GTCAAAAACCTAGTGGCTTTTAATTGTGCAGCCTTAGAAAGTGCGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAACCTAGTGGCTTTTAATTGTGCAGCCTTAGAAAGTGCGGAGAA  200

seq1  GGTTCAAGTATAGGATAGGCAAAGGTCCAGAACCAAATTTGATGAAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAAGTATAGGATAGGCAAAGGTCCAGAACCAAATTTGATGAAGGAG  250

seq1  AGAAGGATGGCAAGCTACAAACATTAGAAGTGACAGGTAATAATTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGGCAAGCTACAAACATTAGAAGTGACAGGTAATAATTCTCTA  300

seq1  CCCTCCCCCCCTCCAGCCCCTTCTCTGTGTTTGTCTAGACCGGGTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCCTCCAGCCCCTTCTCTGTGTTTGTCTAGACCGGGTTTCCC  350

seq1  TGTATAACCCCGACTGTCCTTGAATTC  377
      |||||||||||||||||||||||||||
seq2  TGTATAACCCCGACTGTCCTTGAATTC  377