BAC Information

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BAC

Clone NameB6Ng01-023I02
Chromosome4 (Build37)
Map Location 135,342,898 - 135,514,116
singlet/doubletdoublet
Overlap geneMyom3, Fusip1, Pnrc2, Cnr2, Fuca1, Hmgcl
Upstream geneTmem57, Rhd, Tmem50a, D4Wsu53e, Syf2, Runx3, Clic4, LOC676072, Srrm1, A330049M08Rik, LOC665287, Dscr1l2, Npal3, 4930555I21Rik, Grhl3, 1700029M20Rik, Il28ra, Il22ra1, LOC665334
Downstream geneGale, Lypla2, 1110049F12Rik, LOC669445, Tceb3, Rpl11, Id3, E2f2, Ddefl1, Tcea3, Zfp46, Hnrpr, Htr1d, LOC100042540, Luzp1, Aof2, LOC667080, LOC433770, 4930549C01Rik, BC029684, Ephb2, C1qb, C1qc, C1qa, Epha8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023I02.bB6Ng01-023I02.g
ACCDH855406DH855407
length844444
definitionDH855406|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I02, 5' end.DH855407|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,342,898 - 135,343,742)(135,513,667 - 135,514,116)
sequence
gaattcactacttgtctcggctggctggctggtgaaccgtagggatcctg
tctctgcccttgcacatacaccccaagtagaagttaaacatacacacaat
cacactccacttttgtgttggtgctaggaaccaaactcatttcctcaggc
acatgtggcacacactttaaccaagagtgccatcccccagactctcatct
ttgcatgtgggtgagagagtctagaagtgtgggcattctttacaacccga
gggacaacatcccccgtgtgccattccatatgtcactatgtactggggca
atgttttagcctagaaccttctacccctatcccgctggcaaccatttatc
ctacaaggtgatccagataatgtcagctgtttggaggcccctgacggctg
aacttttttctcccaggttcacagtcccagggctgaggactgggaaggag
tacgacttttgcatcaggtcggtcagcgaggctggggttggtgagagttc
agctgccacacagccagtcagggtcaagcaagcactaggtgagtccgggg
cagcacccacctgcaatgctcagggaagccaggcctgggcaggagccaag
gccatgccttggaagatctgatttcaatcctctatcaagggaactggagc
tttctgctcactttttcattcaaggagaaagggacagtggcctgaagccc
ttgtgcacactgatcctgggcctctctaggcagtgggaagggccccaggc
tcagaggtgagactccgagacaccctttaagggagcaagacacttctggc
tcagagaagattctagatctgggtgggcacccacggtggaggtt
cagaaagagatgagctgtgaagggagcagtgggggatggggagttgtggg
gagaggcagaggcggctagcatggcaagggttagtgaggcagacctccct
gagggcatggggacttcagagggaagatcttccaaaggtgtgttccagtc
agggtcagggtctggcatgctcgggacagagcaaaggacagactaaggcc
tggggacagtcggggcaaggaagtatgacatgaggcaggaggggcgccca
gactgactgtgacaatcatgtagagtctgctgtcaccacctgttggctct
ggggcagctttagttatgctgagggtgaaaatttaagcctgcaatcctag
cccttggaaggcagaggcaggaggattgccaacttccgttacaaaatgag
ttcctagtcaacatgaacctaaagaatgaaatggtacccaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_135342898_135343742
seq2: B6Ng01-023I02.b_30_873

seq1  GAATTCACTACTTGTCTCGGCTGGCTGGCTGGTGAACCGTAGGGATCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTTGTCTCGGCTGGCTGGCTGGTGAACCGTAGGGATCCTG  50

seq1  TCTCTGCCCTTGCACATACACCCCAAGTAGAAGTTAAACATACACACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCTTGCACATACACCCCAAGTAGAAGTTAAACATACACACAAT  100

seq1  CACACTCCACTTTTGTGTTGGTGCTAGGAACCAAACTCATTTCCTCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCCACTTTTGTGTTGGTGCTAGGAACCAAACTCATTTCCTCAGGC  150

seq1  ACATGTGGCACACACTTTAACCAAGAGTGCCATCCCCCAGACTCTCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGCACACACTTTAACCAAGAGTGCCATCCCCCAGACTCTCATCT  200

seq1  TTGCATGTGGGTGAGAGAGTCTAGAAGTGTGGGCATTCTTTACAACCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTGGGTGAGAGAGTCTAGAAGTGTGGGCATTCTTTACAACCCGA  250

seq1  GGGACAACATCCCCCGTGTGCCATTCCATATGTCACTATGTACTGGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAACATCCCCCGTGTGCCATTCCATATGTCACTATGTACTGGGGCA  300

seq1  ATGTTTTAGCCTAGAACCTTCTACCCCTATCCCGCTGGCAACCATTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAGCCTAGAACCTTCTACCCCTATCCCGCTGGCAACCATTTATC  350

seq1  CTACAAGGTGATCCAGATAATGTCAGCTGTTTGGAGGCCCCTGACGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGGTGATCCAGATAATGTCAGCTGTTTGGAGGCCCCTGACGGCTG  400

seq1  AACTTTTTTCTCCCAGGTTCACAGTCCCAGGGCTGAGGACTGGGAAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTTCTCCCAGGTTCACAGTCCCAGGGCTGAGGACTGGGAAGGAG  450

seq1  TACGACTTTTGCATCAGGTCGGTCAGCGAGGCTGGGGTTGGTGAGAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGACTTTTGCATCAGGTCGGTCAGCGAGGCTGGGGTTGGTGAGAGTTC  500

seq1  AGCTGCCACACAGCCAGTCAGGGTCAAGCAAGCACTAGGTGAGTCCGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCACACAGCCAGTCAGGGTCAAGCAAGCACTAGGTGAGTCCGGGG  550

seq1  CAGCACCCACCTGCAATGCTCAGGGAAGCCAGGCCTGGGCAGGAGCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCCACCTGCAATGCTCAGGGAAGCCAGGCCTGGGCAGGAGCCAAG  600

seq1  GCCATGCCTTGGAAGATCTGATTTCAATCCTCTATCAAGGGAACTGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCCTTGGAAGATCTGATTTCAATCCTCTATCAAGGGAACTGGAGC  650

seq1  TTTCTGCTCACTTTTTCATTCAAGGAGAAAGGGACAGTGGCCTGAAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCACTTTTTCATTCAAGGAGAAAGGGACAGTGGCCTGAAGCCC  700

seq1  TTGTGCACACTGATCCTGGGCCTCTCTAGGCAGTGGGAAGGGCCCCAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCACACTGATCCTGGGCCTCTCTAGGCAGTGGGAAGGGCCCCAGGC  750

seq1  TCAGAGGTGAGACTCCGAGACACCCTTTAAGGGAGCAAGACACTTCTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTGAGACTCCGAGACACCCTTTAAGGGAGCAAGACACTTCTGGC  800

seq1  TCAGAGAAGACTCCTAGATCTGGGTGGGCACCCACAGTGGAGGCT  845
      |||||||||| | |||||||||||||||||||||| ||||||| |
seq2  TCAGAGAAGA-TTCTAGATCTGGGTGGGCACCCACGGTGGAGGTT  844

seq1: chr4_135513667_135514116
seq2: B6Ng01-023I02.g_67_516 (reverse)

seq1  TGCCTGGGTACCATTTCATTCTTTAGGTTCATGTTGACTAGGAACTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGTACCATTTCATTCTTTAGGTTCATGTTGACTAGGAACTCATT  50

seq1  TTGTAACGGAAGTTGGCAATCCTCCTGCCTCTGCCTTCCAAGGGCTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACGGAAGTTGGCAATCCTCCTGCCTCTGCCTTCCAAGGGCTAGGA  100

seq1  TTGCAGGCTTGAATTTTCACCCTCAGCATAACTAAAGCTGCCCCAGTGCC  150
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TTGCAGGCTTAAATTTTCACCCTCAGCATAACTAAAGCTGCCCCAGAGCC  150

seq1  AACAGGTGGTGACAGCAGACTCTACATGATTGTCACAGTCAGTCTGGGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTGGTGACAGCAGACTCTACATGATTGTCACAGTCAGTCTGGGCG  200

seq1  CCCCTCCTGCCTCATGTCATACTTCCTTGCCCCGACTGTCCCCAGGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTGCCTCATGTCATACTTCCTTGCCCCGACTGTCCCCAGGCCTT  250

seq1  AGTCTGTCCTTTGCTCTGTCCCGAGCATGCCAGACCCTGACCCTGACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCCTTTGCTCTGTCCCGAGCATGCCAGACCCTGACCCTGACTGG  300

seq1  AACACACCTTTGGAAGATCTTCCCTCTGAAGTCCCCATGCCCTCAGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCTTTGGAAGATCTTCCCTCTGAAGTCCCCATGCCCTCAGGGAG  350

seq1  GTCTGCCTCACTAACCCTTGCCATGCTAGCCGCCTCTGCCTCTCCCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTCACTAACCCTTGCCATGCTAGCCGCCTCTGCCTCTCCCCACA  400

seq1  ACTCCCCATCCCCCACTGCTCCCTTCACAGCTCATCTCTTTCTGGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCATCCCCCACTGCTCCCTTCACAGCTCATCTCTTTCTGGAATTC  450