BAC Information

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BAC

Clone NameB6Ng01-023I24
Chromosome4 (Build37)
Map Location 101,994,096 - 101,995,242
singlet/doubletsinglet
Overlap genePde4b
Upstream geneE130102H24Rik, Ak3l1, LOC669460, Dnajc6, Leprot, Lepr, B020004J07Rik, LOC665362, C130073F10Rik, LOC384033, LOC381535, LOC332923, LOC100039834, LOC381536, LOC433739
Downstream geneSgip1, Tctex1d1, Insl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023I24.bB6Ng01-023I24.g
ACCDH855448DH855449
length8971,149
definitionDH855448|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I24, 5' end.DH855449|Mus musculus domesticus DNA, BAC clone: B6Ng01-023I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatgcacaccaggaagctgtccaatttatgacacacttgttg
taaaatctaagcctgtgaatggatggtggtcacctggggacagaggttcc
caagaagatggcccagagccaggaggacaaatatgtttttgaaaggttta
gtgaatcaggggcagctaaagcaagggtggtaggcattgatgcagttgtc
aagcaggctcatacagtttttaattgcctggaagctagggatgccttagg
gacacggttacagtcagtgagatgcaggcaagagtttttggtgttccttt
aaaataatgtgtcagatcatattgaaattgtcatgggttatgacttagag
tgtagttaaagattagccattgcatccaaaccaggtaaagacacaatggc
aaagttaaactacagactgatatccccaataaacacggatccacaaatgc
tcagtacagtaactgtgaacagagtacagatatgagtttattcaccatgg
tcaagttgactttatccctgcagttcaaaatatacaagtcaaaaaatgta
ataaaccacataaatacactttaaaacaaaaaaatcacaattatctcaat
acacaaagaaaacaccttatgaaatctaacatgcctttgtgataaaagtc
cccgtgaatgtgggactagagggaacatatctcaagataataaaaagcta
tatgagaatcccactgttcaacatcaacatgaatttcagacaaaactcga
ggcaatcatgctgaagcaaggagcgaggcaagtctgtcaactgtctacat
tccttttcaataatggttgtaagctctagctggagaaataaaagcaagta
gacgaagataatagtgaattcaaatctaaaaagaaagagtgaaaccc
gaattctacctccccctgctggaattacaggcataagccaccacacctgg
ctaatgacttcatatttgtagctttattttcctattgtttgtatatgttt
tgcctgtatatgtgtatatgcaccatgtgcatgcctggtagccacagatg
ccagaagatggcatcagaaccccaagaactgtaagtatagatggttgtaa
accaccatgtaagggctaggaatcgacaccagatctagcaccaacttcat
attttaaaattcaaatcatattcaactctcccctaaatagtctaaatttt
aatagtactgaatttgaaatggatcttataatcgagtttgacccactttt
accttattaaattaaattagtttcatattttgtaaccaattcacatattt
ggattgagaaaatataatcatgatttcttatgttaatagctagttcactg
tgaaaagaatttcagataaaaatatagaacttttatttaaatatagtata
taatataaagtatactccccataaaactattttaatctatactaaatgga
agcattggatgtaaggggagaaagaagataaatctatcatcatagagaat
gaagagccaggtgagatcaggacacagatattctccactgttttggttca
tcttcctttatcagaaaagtagataacttcagctttatagtagatataag
agtatatcctgcggtttagtttagctataagtaaattctgcttcaaagtg
cagctaaatcttttgaattaaaaattgtgatgctcttgtaaggtcctaaa
tgaggctttttttttttttcaagtatatcagaaattcatacaattttgaa
ttctacagacagggtgccagggagtctcagaaccctgctgagaagcacag
gaagagtgctctgctgagccagtggtgtcctatctagaactaatttccag
ggacggcgattcctatttgatgatgcctctattcttactgggtttctgct
gaatcataaagttgtatcggggagtaaagtctggtggctagtttcgtaac
atctggcacaattcctattgttgtgggtgggggccaattaacagataatt
tttctggggcatctttctggtcacatgatacattacacaggtttcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_101994096_101995242
seq2: B6Ng01-023I24.g_69_1217

seq1  GAATTCTACCTCCCCCTGCTGGAATTACAGGCATAAGCCACCACACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTCCCCCTGCTGGAATTACAGGCATAAGCCACCACACCTGG  50

seq1  CTAATGACTTCATATTTGTAGCTTTATTTTCCTATTGTTTGTATATGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACTTCATATTTGTAGCTTTATTTTCCTATTGTTTGTATATGTTT  100

seq1  TGCCTGTATATGTGTATATGCACCATGTGCATGCCTGGTAGCCACAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTATATGTGTATATGCACCATGTGCATGCCTGGTAGCCACAGATG  150

seq1  CCAGAAGATGGCATCAGAACCCCAAGAACTGTAAGTATAGATGGTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATGGCATCAGAACCCCAAGAACTGTAAGTATAGATGGTTGTAA  200

seq1  ACCACCATGTAAGGGCTAGGAATCGACACCAGATCTAGCACCAACTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATGTAAGGGCTAGGAATCGACACCAGATCTAGCACCAACTTCAT  250

seq1  ATTTTAAAATTCAAATCATATTCAACTCTCCCCTAAATAGTCTAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATTCAAATCATATTCAACTCTCCCCTAAATAGTCTAAATTTT  300

seq1  AATAGTACTGAATTTGAAATGGATCTTATAATCGAGTTTGACCCACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACTGAATTTGAAATGGATCTTATAATCGAGTTTGACCCACTTTT  350

seq1  ACCTTATTAAATTAAATTAGTTTCATATTTTGTAACCAATTCACATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTAAATTAAATTAGTTTCATATTTTGTAACCAATTCACATATTT  400

seq1  GGATTGAGAAAATATAATCATGATTTCTTATGTTAATAGCTAGTTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAGAAAATATAATCATGATTTCTTATGTTAATAGCTAGTTCACTG  450

seq1  TGAAAAGAATTTCAGATAAAAATATAGAACTTTTATTTAAATATAGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAATTTCAGATAAAAATATAGAACTTTTATTTAAATATAGTATA  500

seq1  TAATATAAAGTATACTCCCCATAAAACTATTTTAATCTATACTAAATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAAGTATACTCCCCATAAAACTATTTTAATCTATACTAAATGGA  550

seq1  AGCATTGGATGTAAGGGGAGAAAGAAGATAAATCTATCATCATAGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGATGTAAGGGGAGAAAGAAGATAAATCTATCATCATAGAGAAT  600

seq1  GAAGAGCCAGGTGAGATCAGGACACAGATATTCTCCACTGTTTTGGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCCAGGTGAGATCAGGACACAGATATTCTCCACTGTTTTGGTTCA  650

seq1  TCTTCCTTTATCAGAAAAGTAGATAACTTCAGCTTTATAGTAGATATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTATCAGAAAAGTAGATAACTTCAGCTTTATAGTAGATATAAG  700

seq1  AGTATATCCTGCGGTTTAG-TTAGCTATAAGTAAATTCTGCTTCAAAGTG  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTATATCCTGCGGTTTAGTTTAGCTATAAGTAAATTCTGCTTCAAAGTG  750

seq1  CAGCTAAATCTTTTGAATTAAAAATTGTGATGCTCTTGTAAGGTCCTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAATCTTTTGAATTAAAAATTGTGATGCTCTTGTAAGGTCCTAAA  800

seq1  TGAGGC-TTTTTTTTTTTTCAAGTATATCAGAAATTCATACAATTTTGAA  848
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTTTTTTTTTTTTCAAGTATATCAGAAATTCATACAATTTTGAA  850

seq1  TTCTACAGACA-GGTGCCA-GGAGTCTCAGAACCCTGCTGAGAAGCACAG  896
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  TTCTACAGACAGGGTGCCAGGGAGTCTCAGAACCCTGCTGAGAAGCACAG  900

seq1  GAAGAGTGC-CTGCTGAGCCAGTGGTGTCCTATCTAGAACTAATTTCCAG  945
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGCTCTGCTGAGCCAGTGGTGTCCTATCTAGAACTAATTTCCAG  950

seq1  GGACGGCGATTTCTATTTGATGATG-CTCTATTCTTACTTGGTTTCTGCT  994
      ||||||||||| ||||||||||||| ||||||||||||| ||||||||||
seq2  GGACGGCGATTCCTATTTGATGATGCCTCTATTCTTACTGGGTTTCTGCT  1000

seq1  GAATCATAAAGTTGTATC-GGGAGTAAAGTTCTGGTGGCTAGTTTCGTCA  1043
      |||||||||||||||||| |||||||||| |||||||||||||||||| |
seq2  GAATCATAAAGTTGTATCGGGGAGTAAAG-TCTGGTGGCTAGTTTCGT-A  1048

seq1  ACATCCTGCACAATTCCTATTGTTGTGTGTTTGGTGGCCAATTAAACGAT  1093
      |||||  |||||||||||||||||||| |  ||| ||||||||||  |||
seq2  ACATCTGGCACAATTCCTATTGTTGTGGG--TGGGGGCCAATTAACAGAT  1096

seq1  AA-TTTTCTGTGGGCATCTTCCTGTTCACATGATACCATTCACAATGTTT  1142
      || ||||||| ||||||||| ||| |||||||||||  | ||| | ||||
seq2  AATTTTTCTG-GGGCATCTTTCTGGTCACATGATACATTACAC-AGGTTT  1144

seq1  CCTCT  1147
      |||||
seq2  CCTCT  1149