BAC Information

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BAC

Clone NameB6Ng01-024A02
Chromosome4 (Build37)
Map Location 89,555,360 - 89,556,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024A02.bB6Ng01-024A02.g
ACCDH855770DH855771
length1,194998
definitionDH855770|Mus musculus domesticus DNA, BAC clone: B6Ng01-024A02, 5' end.DH855771|Mus musculus domesticus DNA, BAC clone: B6Ng01-024A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaagtattccatatgcctatatgggtcttacaaaggcttacta
tatgtaacttttctattgccatctcatgaatcattgggactacaggatca
tatgttatatgtgatataacagactctacagcaaactatagatattgaag
aaacatctcctcttgtaggcctgagtcagaaatagaatgtttaatttttt
tctgtgaattaggtacacattcatacagttcattttgtgaaaggtatctt
tgtaaaaggagatgtcagtcagatacaataacttaacttttgtcttataa
gggatatttctgtatggacaacatcactgtacttctcagaattttgttga
actgcaagattcttgcattttgatatgaattatttttcatactgtgatgt
gtcaatgatttacttagtctgcagtgatagctaccttcttctcactcagt
ccaattaacataaagtcaccaatataatggagcagtgtaatacctttctg
aagagacaggtagtttagattcttgagaacaaaataatgctatagggtta
gagcattaatatacccaagataagaaagtgaagttgtattgctggccttg
caaaagtaaattgcttctgatagaccttataagcaactatgaagagaaaa
acagctagatcaatagctgtatatcaaatacaaagagatgtattaagctt
cttgaagaagaaaagcataaacaagcacatcgctggaataagaatcacca
cttgattaaccttacaataatcaactgccattctctaagacacatacatc
ttccgcacaagcctaagaggtaaatgaaatggagatgtggtgagaaccat
catgcctgcaatttttgagtcctggtgctggagctattctcttcattgtc
tcaaggtgtgtatattggcactcacccactattgtctcagtggggctgcc
ctattgggttcatgatcctttccaacatattatctctcacacaaagggat
ttgggtccataaactaataaagtctgaaattgtcatattatcctgaatag
atcagtgaaattattcatcttctcttcccctttttctccttatctccatc
tccaacccaacccctgtggtttctgtccgtgtcattcacatgaacgttcc
cattcccggacattctttaactctcttggatctccacacaatat
gaattctgagtaatgaaacaatgaaaagctgaaacaaacaaacaaacaaa
caaacaaacaaacaaactaactaacaacccaatgggcagcctcatcttga
aatagataaaaaagaaggcagtatcaataaattaatcaatcaagtcttga
acacaggtagttgattcagaacattcaggtgctaacatatacaaaataat
gtatgagccaaatataggatatctatggcaaagcatgaagtgatcaaact
tatgaatcaagggcatagaagaaggaattacaagcttaagactttctcag
taaaatcagaataatgcaaagatattctttttttcacttttaatcaattc
aggggtttatgtttcaactagaacaagaagtcaagagatggatataaaag
ggatgcaaatgggaaaggaagcattaaaatgcacttgtttgctgatgaca
tcattatatatatgagatgccaaatactccactagaaaagtctaagaact
gatgaatactttccagtatgtggatacaaagctaacaaagagaaaagagt
agacgtcctacataataaagataaatatgttgagaaagaaatcaggcaaa
caattctattgcaattgcatcaaaactacattggaataaaactacctaag
taactgaatgaatttagagtgaaacttctcaatcattaaagaatcaggta
ctaaaaacaaaataaacaaaacaaaacaaaacactaccacttcccaatat
catgcagcagcaacagcagtagaattaacattatgaaaaaaatttataga
ttcaatgtcatctccattaaaattctgatttctagtcttaaaaagcaaac
aggtctaaatgtacatggaaacacagaagatcctaaatagccaaataatc
ctgaacaaatgtaaatatgattgcatgatttcagcttgtactacagagcc
ttagtaactaaagcaacatggttctattatgaaaagaaacacatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89555360_89556136
seq2: B6Ng01-024A02.g_67_843

seq1  GAATTCTGAGTAATGAAACAATGAAAAGCTGAAACAAACAAACAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTAATGAAACAATGAAAAGCTGAAACAAACAAACAAACAAA  50

seq1  CAAACAAACAAACAAACTAACTAACAACCCAATGGGCAGCCTCATCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACTAACTAACAACCCAATGGGCAGCCTCATCTTGA  100

seq1  AATAGATAAAAAAGAAGGCAGTATCAATAAATTAATCAATCAAGTCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAAAAAGAAGGCAGTATCAATAAATTAATCAATCAAGTCTTGA  150

seq1  ACACAGGTAGTTGATTCAGAACATTCAGGTGCTAACATATACAAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTAGTTGATTCAGAACATTCAGGTGCTAACATATACAAAATAAT  200

seq1  GTATGAGCCAAATATAGGATATCTATGGCAAAGCATGAAGTGATCAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGCCAAATATAGGATATCTATGGCAAAGCATGAAGTGATCAAACT  250

seq1  TATGAATCAAGGGCATAGAAGAAGGAATTACAAGCTTAAGACTTTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCAAGGGCATAGAAGAAGGAATTACAAGCTTAAGACTTTCTCAG  300

seq1  TAAAATCAGAATAATGCAAAGATATTCTTTTTTTCACTTTTAATCAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAGAATAATGCAAAGATATTCTTTTTTTCACTTTTAATCAATTC  350

seq1  AGGGGTTTATGTTTCAACTAGAACAAGAAGTCAAGAGATGGATATAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTATGTTTCAACTAGAACAAGAAGTCAAGAGATGGATATAAAAG  400

seq1  GGATGCAAATGGGAAAGGAAGCATTAAAATGCACTTGTTTGCTGATGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAATGGGAAAGGAAGCATTAAAATGCACTTGTTTGCTGATGACA  450

seq1  TCATTATATATATGAGATGCCAAATACTCCACTAGAAAAGTCTAAGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATATATATGAGATGCCAAATACTCCACTAGAAAAGTCTAAGAACT  500

seq1  GATGAATACTTTCCAGTATGTGGATACAAAGCTAACAAAGAGAAAAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATACTTTCCAGTATGTGGATACAAAGCTAACAAAGAGAAAAGAGT  550

seq1  AGACGTCCTACATAATAAAGATAAATATGTTGAGAAAGAAATCAGGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTCCTACATAATAAAGATAAATATGTTGAGAAAGAAATCAGGCAAA  600

seq1  CAATTCTATTGCAATTGCATCAAAACTACATTGGAATAAAACTACCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTATTGCAATTGCATCAAAACTACATTGGAATAAAACTACCTAAG  650

seq1  TAACTGAATGAATTTAGAGTGAAACTTCTCAATCATTAAAGAATCAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAATGAATTTAGAGTGAAACTTCTCAATCATTAAAGAATCAGGTA  700

seq1  CTAAAAACAAAATAAACAAAACAAAACAAAACACTACCACTTCCCAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACAAAATAAACAAAACAAAACAAAACACTACCACTTCCCAATAT  750

seq1  CATGCAGCAGCAACAGCAGTAGAATTA  777
      |||||||||||||||||||||||||||
seq2  CATGCAGCAGCAACAGCAGTAGAATTA  777