BAC Information

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BAC

Clone NameB6Ng01-024D18
Chromosome4 (Build37)
Map Location 150,847,857 - 150,976,703
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneRere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D18.bB6Ng01-024D18.g
ACCDH855934DH855935
length902620
definitionDH855934|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D18, 5' end.DH855935|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,847,857 - 150,848,758)(150,976,084 - 150,976,703)
sequence
gaattctcaatgctgcagagagtgtgtgccggactctctcggctgctcct
aggcaggcaagacaccaagaagagggagaagctgggcttaggaggagaga
acatgggaaaccaggattggagacacagtcagcttgttgacaaactcctc
tgtgaggcaagaaagtcaacacatggatgggacaccgccaaaggcagagg
ggtgtgctgtgcaaggagccatgaagtgtcccatgtggcggcatggcccc
tggagcacctctaggagggccagcattcacaacccaacagatgcaagttc
acccccacccaagcccagatactatttcaaagtcggggcatgaagtggga
cttgcaaggacatgcaaggacatggtctaaaaggtgccttagcctgtcgt
tgacagggcaaaggaaaggagcccggaacggggaagggacggcagggagt
gcaggaagggattaggtgtgccccacacgctaagcctctgcctcccccag
caggcacacgcagacctgcagctcggatcctcatagccagagggtccgag
gagctgggccaggcgatgaatcatcaccctgatggggacagaaaacatca
gctttgcaggtcccacggcctgtctgacacaacacgcaagggattttccc
gacagtatcatccgtttagctgatggccctgaagtatttcatttagctgg
aaatcacgcctggtccatttcccagagccggctgacattatgagaagccc
gtgtgacgtgcctgcaggaaggcagctcaataccccgtcacctgcagtca
gggccccactaccctcacacgggagcacggggctcagtggcttctagagc
agaattgctgctttcctgctaggatgggctcatagcaagccggggtgtgt
gt
gaattctccttttgtttgctcttcactcccagaagctcaaagccggggtg
cttgcttgccacatgggattcctgattacaggtgttagcaaacggagctg
gtgtctacgcctacctccccttgtgcgggtgggttatgaaattcaaacac
tattgaaacccaaacacctttcatctattaatggccactggtggcctata
atcaagtcacactctgttagctacacaattaacttgtttgtttgaagtgt
gaattaaggttttgaggcgtttgctaatgaatcttccttgctccctggtt
tagtgaaaacccctgtattttcctaaagtaggttcctctggaatgtttgg
aaaggtgattgtcaggtctattttctcacttggtacagtcaacatctgtt
cagctttcacccagaaagaaagaagcaggctctgggtctgggggagacga
ctcacaaggcacaactgctggcagcagaagcccgaggacctgaattgaga
gctccagctcatgaaaagctatgcacgccacacgtgtgccccatcatgca
aatgaaaagcttggcatgccacctgtgtgcctgtaaccgtagagctgggc
aggggttgggggtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150847857_150848758
seq2: B6Ng01-024D18.b_41_942

seq1  GAATTCTCAATGCTGCAGAGAGTGTGTGCCGGACTCTCTCGGCTGCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATGCTGCAGAGAGTGTGTGCCGGACTCTCTCGGCTGCTCCT  50

seq1  AGGCAGGCAAGACACCAAGAAGAGGGAGAAGCTGGGCTTAGGAGGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAAGACACCAAGAAGAGGGAGAAGCTGGGCTTAGGAGGAGAGA  100

seq1  ACATGGGAAACCAGGATTGGAGACACAGTCAGCTTGTTGACAAACTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGAAACCAGGATTGGAGACACAGTCAGCTTGTTGACAAACTCCTC  150

seq1  TGTGAGGCAAGAAAGTCAACACATGGATGGGACACCGCCAAAGGCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCAAGAAAGTCAACACATGGATGGGACACCGCCAAAGGCAGAGG  200

seq1  GGTGTGCTGTGCAAGGAGCCATGAAGTGTCCCATGTGGCGGCATGGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTGTGCAAGGAGCCATGAAGTGTCCCATGTGGCGGCATGGCCCC  250

seq1  TGGAGCACCTCTAGGAGGGCCAGCATTCACAACCCAACAGATGCAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACCTCTAGGAGGGCCAGCATTCACAACCCAACAGATGCAAGTTC  300

seq1  ACCCCCACCCAAGCCCAGATACTATTTCAAAGTCGGGGCATGAAGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCCAAGCCCAGATACTATTTCAAAGTCGGGGCATGAAGTGGGA  350

seq1  CTTGCAAGGACATGCAAGGACATGGTCTAAAAGGTGCCTTAGCCTGTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAGGACATGCAAGGACATGGTCTAAAAGGTGCCTTAGCCTGTCGT  400

seq1  TGACAGGGCAAAGGAAAGGAGCCCGGAACGGGGAAGGGACGGCAGGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGGCAAAGGAAAGGAGCCCGGAACGGGGAAGGGACGGCAGGGAGT  450

seq1  GCAGGAAGGGATTAGGTGTGCCCCACACGCTAAGCCTCTGCCTCCCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGGATTAGGTGTGCCCCACACGCTAAGCCTCTGCCTCCCCCAG  500

seq1  CAGGCACACGCAGACCTGCAGCTCGGATCCTCATAGCCAGAGGGTCCGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACACGCAGACCTGCAGCTCGGATCCTCATAGCCAGAGGGTCCGAG  550

seq1  GAGCTGGGCCAGGCGATGAATCATCACCCTGATGGGGACAGAAAACATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCCAGGCGATGAATCATCACCCTGATGGGGACAGAAAACATCA  600

seq1  GCTTTGCAGGTCCCACGGCCTGTCTGACACAACACGCAAGGGATTTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCAGGTCCCACGGCCTGTCTGACACAACACGCAAGGGATTTTCCC  650

seq1  GACAGTATCATCCGTTTAGCTGATGGCCCTGAAGTATTTCATTTAGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTATCATCCGTTTAGCTGATGGCCCTGAAGTATTTCATTTAGCTGG  700

seq1  AAATCACGCCTGGTCCATTTCCCAGAGCCGGCTGACATTATGAGAAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACGCCTGGTCCATTTCCCAGAGCCGGCTGACATTATGAGAAGCCC  750

seq1  GTGTGACGTGCCTGCAGGAAGGCAGCTCAATACCCCGTCACCTGCAGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACGTGCCTGCAGGAAGGCAGCTCAATACCCCGTCACCTGCAGTCA  800

seq1  GGGCCCCACTACCCTCACACGGGAGCACGGGGCTCAGGTGGCTTCTAGAG  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGCCCCACTACCCTCACACGGGAGCACGGGGCTCA-GTGGCTTCTAGAG  849

seq1  CAGAATTGCTGC-TTCCTGCTAGGATGGGCTCATAGCAAGCCGGGGTGTG  899
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGAATTGCTGCTTTCCTGCTAGGATGGGCTCATAGCAAGCCGGGGTGTG  899

seq1  TGT  902
      |||
seq2  TGT  902

seq1: chr4_150976084_150976703
seq2: B6Ng01-024D18.g_67_686 (reverse)

seq1  CCACCCCACCCCCAACCCCTGCCCAGCTCTACGGTTACAGGCACACAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACCCCCAACCCCTGCCCAGCTCTACGGTTACAGGCACACAGGT  50

seq1  GGCATGCCAAGCTTTTCATTTGCATGATGGGGCACACGTGTGGCGTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCCAAGCTTTTCATTTGCATGATGGGGCACACGTGTGGCGTGCAT  100

seq1  AGCTTTTCATGAGCTGGAGCTCTCAATTCAGGTCCTCGGGCTTCTGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCATGAGCTGGAGCTCTCAATTCAGGTCCTCGGGCTTCTGCTGC  150

seq1  CAGCAGTTGTGCCTTGTGAGTCGTCTCCCCCAGACCCAGAGCCTGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTGTGCCTTGTGAGTCGTCTCCCCCAGACCCAGAGCCTGCTTCT  200

seq1  TTCTTTCTGGGTGAAAGCTGAACAGATGTTGACTGTACCAAGTGAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGGGTGAAAGCTGAACAGATGTTGACTGTACCAAGTGAGAAAA  250

seq1  TAGACCTGACAATCACCTTTCCAAACATTCCAGAGGAACCTACTTTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTGACAATCACCTTTCCAAACATTCCAGAGGAACCTACTTTAGGA  300

seq1  AAATACAGGGGTTTTCACTAAACCAGGGAGCAAGGAAGATTCATTAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGGGGTTTTCACTAAACCAGGGAGCAAGGAAGATTCATTAGCAA  350

seq1  ACGCCTCAAAACCTTAATTCACACTTCAAACAAACAAGTTAATTGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTCAAAACCTTAATTCACACTTCAAACAAACAAGTTAATTGTGTAG  400

seq1  CTAACAGAGTGTGACTTGATTATAGGCCACCAGTGGCCATTAATAGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGAGTGTGACTTGATTATAGGCCACCAGTGGCCATTAATAGATGA  450

seq1  AAGGTGTTTGGGTTTCAATAGTGTTTGAATTTCATAACCCACCCGCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTTGGGTTTCAATAGTGTTTGAATTTCATAACCCACCCGCACAA  500

seq1  GGGGAGGTAGGCGTAGACACCAGCTCCGTTTGCTAACACCTGTAATCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGTAGGCGTAGACACCAGCTCCGTTTGCTAACACCTGTAATCAGG  550

seq1  AATCCCATGTGGCAAGCAAGCACCCCGGCTTTGAGCTTCTGGGAGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATGTGGCAAGCAAGCACCCCGGCTTTGAGCTTCTGGGAGTGAAG  600

seq1  AGCAAACAAAAGGAGAATTC  620
      ||||||||||||||||||||
seq2  AGCAAACAAAAGGAGAATTC  620