BAC Information

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BAC

Clone NameB6Ng01-024J14
Chromosome4 (Build37)
Map Location 28,822,124 - 28,823,246
singlet/doubletsinglet
Overlap geneEpha7
Upstream geneTpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773
Downstream geneLOC100040907, LOC100040811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024J14.bB6Ng01-024J14.g
ACCDH856183DH856184
length8921,106
definitionDH856183|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J14, 5' end.DH856184|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaataattgagtagtaactccattgtgtaaatgtac
cacattttctgtatccattcctctgtttatggacatctgggttctttcta
gctcctggctattataaataaggcggctatgaacatagtgaagcatgtgt
ccttgttatatgttgaagcatcttttgggtatatgcccaggagtggtata
gctgggtcctcaagtaatactatatccagtttccacagtggttgtaccag
attgcaattccaccagcaatggaagagtgttcctctttctccacaacctc
cccagcattgactatcacctgagtttttttatctgagccattctgaatgg
tgtgaggtggaatctcaggattgttttgatttgcagttccctgataacta
aggatgtagaacattttttacctgattctcaggcattcgatattcctcag
ttgagaattatttgcttaactctgtaccctatttttaatagggttattta
attctctggagtctaactttttgaattctttgtatatattgaatactagc
cctctattggatataggattggtaaagatctttgcccaatcttttggatg
ccattttgtcctattgacagtgtcctttgtcctacagaagctttgcaatt
ttatgaggtcccatttgtctattgttgatttagaacataagccattggtg
tttgttcaagaaaatttcccctgtgtccatatgctcatggctctttccac
actttaccatctattagttttcagcatatccctgttttatgtggaggtcc
ttgatccactttggacttgaactttgtacaaagagataagaatgggatcg
attttgtatcctttgcatgctgaccaccagtttaaacaagca

gaattcacttttccacaggactgacttatgagttctggaacccatgtacc
tgtcacttccactgtatcattatacttcaccctcatttgctctgataaca
ggtgattggtttttagtgattcttctccacatgaggaagtctagtagcca
ctgatttagggactattccttggcaattcttagtctaattttactttgaa
ctagaagagtgtttcatttcttgagatttccttggtctgtctgaatagat
gggacctaattacaaagattttggttaagatgataagaacttgttaaaac
atggtgtgactacattggcacatttgtcttatgtaaaggaaggtacatca
ggacaaacaataaatatgcttgtagctattccactcatcacattaaattt
gtgttttccctttataagtaggcatatcaagttttgttagggtgaaatct
ctcgaaactgtttcttatgctctagtcatctttccctcatggatgatcta
agataccatcattgacttgaggcagaccacgtgtccaaggatacttggag
gtagttttgtttcgtgatgaaacacatgagaaggatgtaaatggaaggac
tcctggagttaagattttaatatttcagttgtagggagctctctttgaaa
acatagctctttatacggatttggtgtgaaaatgtttagtggagcagatg
gagatccagctggtacaatatatgtttgtcagggtatctggcatttagct
acatccaaaaatgctatcaaactgaaagacgctaaagagcagcgctgtgt
ggaagccagtgtgatcagccaggggtagagtctctcatttctgattctaa
ccttgtagggatacattttaacacacacggaatttcgacttttaaaaata
aaatctgagaaaatgtaaataaattgtcaacagctgcctttcaacttctt
gattttgttaggcgaggcaagcatgctactctgtgttgagtgtagtgttt
cagtataggctgtattcttagtgtacagtaacacgtggcactccagggcc
tctgcatatggaaccatcatataacatcttggctactgtaagcatggtgg
atgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28822124_28823246
seq2: B6Ng01-024J14.g_69_1174

seq1  GAATTCACTTTTCCACAGGACTGACTTATGAGTTCTGGAACCCATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTCCACAGGACTGACTTATGAGTTCTGGAACCCATGTACC  50

seq1  TGTCACTTCCACTGTATCATTATACTTCACCCTCATTTGCTCTGATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTCCACTGTATCATTATACTTCACCCTCATTTGCTCTGATAACA  100

seq1  GGTGATTGGTTTTTAGTGATTCTTCTCCACATGAGGAAGTCTAGTAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTGGTTTTTAGTGATTCTTCTCCACATGAGGAAGTCTAGTAGCCA  150

seq1  CTGATTTAGGGACTATTCCTTGGCAATTCTTAGTCTAATTTTACTTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAGGGACTATTCCTTGGCAATTCTTAGTCTAATTTTACTTTGAA  200

seq1  CTAGAAGAGTGTTTCATTTCTTGAGATTTCCTTGGTCTGTCTGAATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGAGTGTTTCATTTCTTGAGATTTCCTTGGTCTGTCTGAATAGAT  250

seq1  GGGACCTAATTACAAAGATTTTGGTTAAGATGATAAGAACTTGTTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTAATTACAAAGATTTTGGTTAAGATGATAAGAACTTGTTAAAAC  300

seq1  ATGGTGTGACTACATTGGCACATTTGTCTTATGTAAAGGAAGGTACATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGACTACATTGGCACATTTGTCTTATGTAAAGGAAGGTACATCA  350

seq1  GGACAAACAATAAATATGCTTGTAGCTATTCCACTCATCACATTAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACAATAAATATGCTTGTAGCTATTCCACTCATCACATTAAATTT  400

seq1  GTGTTTTCCCTTTATAAGTAGGCATATCAAGTTTTGTTAGGGTGAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCCTTTATAAGTAGGCATATCAAGTTTTGTTAGGGTGAAATCT  450

seq1  CTCGAAACTGTTTCTTATGCTCTAGTCATCTTTCCCTCATGGATGATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAACTGTTTCTTATGCTCTAGTCATCTTTCCCTCATGGATGATCTA  500

seq1  AGATACCATCATTGACTTGAGGCAGACCACGTGTCCAAGGATACTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCATCATTGACTTGAGGCAGACCACGTGTCCAAGGATACTTGGAG  550

seq1  GTAGTTTTGTTTCGTGATGAAACACATGAGAAGGATGTAAATGGAAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTGTTTCGTGATGAAACACATGAGAAGGATGTAAATGGAAGGAC  600

seq1  TCCTGGAGTTAAGATTTTAATATTTCAGTTGTAGGGAGCTCTCTTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGTTAAGATTTTAATATTTCAGTTGTAGGGAGCTCTCTTTGAAA  650

seq1  ACATAGCTCTTTATACGGATTTGGTGTGAAAATGTTTAGTGGAGCAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTCTTTATACGGATTTGGTGTGAAAATGTTTAGTGGAGCAGATG  700

seq1  GAGATCCAGCTGGTACAATATATGTTTGTCAGGGTATCTGGCATTTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGCTGGTACAATATATGTTTGTCAGGGTATCTGGCATTTAGCT  750

seq1  ACATCCAAAAATGCTATCAAACTGAAAGACGCTAAAGAGCAGCGCTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAAAATGCTATCAAACTGAAAGACGCTAAAGAGCAGCGCTGTGT  800

seq1  GGAAGCCAGTGTGATCAGCCAGGGGTAGAGTTCTCTCATTTCTGATTCCT  850
      |||||||||||||||||||||||||||||| |||||||||||||||| ||
seq2  GGAAGCCAGTGTGATCAGCCAGGGGTAGAG-TCTCTCATTTCTGATT-CT  848

seq1  AACCTTGTAGGGATACATTTTAACACACACGGAATTTTCGAC-TTTAAAA  899
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  AACCTTGTAGGGATACATTTTAACACACACGGAA-TTTCGACTTTTAAAA  897

seq1  ATAAAATCTGAGAAAAATGTAAATAAAATTGTCAAACAGCTGCCTTTCCA  949
      |||||||||||| ||||||||||| |||||||| |||||||||||||| |
seq2  ATAAAATCTGAG-AAAATGTAAAT-AAATTGTC-AACAGCTGCCTTTCAA  944

seq1  ACTCTTGATTTTTGTAGGCGAGGCAAAGCATGCTACTCTGTGTTGAAGTG  999
        ||||||||||  |||||||||| |||||||||||||||||||| ||||
seq2  CTTCTTGATTTTGTTAGGCGAGGC-AAGCATGCTACTCTGTGTTG-AGTG  992

seq1  TAGTGTTTAAAGAATAGGCTGTATCTTAAGTGTACAGTAAACACGT-GCA  1048
      ||||||||  || |||||||||||  | |||||||||| ||||||| |||
seq2  TAGTGTTT-CAGTATAGGCTGTATTCTTAGTGTACAGT-AACACGTGGCA  1040

seq1  CTTCACAGGGCTTCTGCATATTGAAAACCATCATATTAACATCTTTGGCT  1098
      ||   |||||| ||||||||| |  |||||||||| ||||||| ||||||
seq2  CT--CCAGGGCCTCTGCATATGG--AACCATCATA-TAACATC-TTGGCT  1084

seq1  TAACTGTAAAGCATGGTAGATGATA  1123
        ||||| ||||||||| |||||||
seq2  --ACTGT-AAGCATGGTGGATGATA  1106


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