BAC Information

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BAC

Clone NameB6Ng01-024L05
Chromosome4 (Build37)
Map Location 8,331,237 - 8,331,733
singlet/doubletsinglet
Overlap genenone
Upstream geneCar8, LOC100039494, LOC100039505
Downstream geneLOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024L05.bB6Ng01-024L05.g
ACCDH856254DH856255
length5981,141
definitionDH856254|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L05, 5' end.DH856255|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgatctttccaagacttttatcatgaatgggtgttggatcttgtggaat
gatttttccgtgtctaaggagataatcctgtggtttttgtctttgagttt
gtttatataatggattacgttgatggatttctgtatattaaaccatccct
gcatctctggaataaaacctacttggtcaggatgaatgattgttttaatg
tgttctttaattccgttagtgagaaatttattgagtatttttgcatcaat
attcataagggaaattggtctgaagttctctatctttgttggatctttct
gtggtttaggtatcagagtaattgtggctacatagaatgagttgggtaga
gtaccttctagttctatttcgtggaatagtttgtgcagaactggaattag
atgttctttgaaggtctgatacaactctgcactaaacacatctagtcctg
ggcttttttttttttttttttttttttttttttttgctgggaaactatta
atgactgcttgttttccttaggggaaatgggactgttttgattgttaact
ttatcctgattttactttggtacccgttattcttctagaaatttttcc
gaattctcacctgaggaataccgaatgacagagaagcacctgaaaaaatg
ttcatcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtaacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagttgtcccaaccagtaaaaaggacacatgccccagtat
gttcatagcagccttatttataatagccagaagctggaaagaaccaatat
gcccctcaacagaggaatggatacaaaaaaatgtgtttcatttacacaat
ggagtactactcagctattaaaaagaatgtatggacctggatggcatcat
cctgagtgaggtaacccaatcacaaaggaactcacatgatatgtactcac
tgataagtggatattcgcccaaaacttaggatacccaatatataagatac
aatttgctaaatacaggaaactcaagaaaaatgaagaccaaagtgtggac
actgtgccccttcttagaattgggaacaaaacacccatggaaggaattac
agagacaaagtttggagctgtgtcaaaaggatggaccatctagagactgc
catatccagggatccactccataatctgtttccaaacgctgatagcattg
catacactagcaagattttggtaaaaggacccagatatagctgtctcatg
tgagactattatggggcctagcaaacacagaagtggatgctcacagtcag
ctattggatggatcacatggctcccaatggaggagctagaaaaagtacca
agagctaaagggatctgcaccttataggtggacacattatcactaaccag
tacccggagctcttgattctatctacatttgtatcaaagatgctagtcgt
catcactggaaagggagccatggacactactttatatgccccagtacaag
gaatgccagtcaaaaatgggaatggtgtgtgtaagggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8331237_8331733
seq2: B6Ng01-024L05.b_120_639 (reverse)

seq1  GGACAAATTTCTAGACAGATACCAGGTACCAAAGTTAAATCAGGATCAAG  50
      ||| |||||||||||   ||| | ||||||||||| |||||||||| |||
seq2  GGAAAAATTTCTAGAAGAATAACGGGTACCAAAGTAAAATCAGGATAAAG  50

seq1  TTAATGATCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTCATT  100
      ||||  ||| |||||||||||| |||||||| |||| | |||||||||||
seq2  TTAACAATCAAAACAGTCCCATTTCCCCTAAGGAAA-ACAAGCAGTCATT  99

seq1  AATAGTCTCCCAGC-----------------------CAAAAAAAAGCCC  127
      |||||| |||||||                        ||||||||||||
seq2  AATAGTTTCCCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCC  149

seq1  AGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATC  177
      ||||| ||||| ||||||||||||||| |||||||||||||||||| |||
seq2  AGGACTAGATGTGTTTAGTGCAGAGTTGTATCAGACCTTCAAAGAACATC  199

seq1  TAATTCCAGTTCTGCACAAACTATTCCACAAAATAGAAGAAGAAGGTACT  227
      ||||||||||||||||||||||||||||| ||||||||  ||||||||||
seq2  TAATTCCAGTTCTGCACAAACTATTCCACGAAATAGAACTAGAAGGTACT  249

seq1  CTACCCAACTCATTCTATGAAGCTACAATTACTCTGATACCTAAACCACA  277
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  CTACCCAACTCATTCTATGTAGCCACAATTACTCTGATACCTAAACCACA  299

seq1  GAAAGATCCAACAAAGATAGAGATCTTCAGACCAATTTCCCTTATGAATA  327
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCCCTTATGAATA  349

seq1  TCGATGCAAAAATACTCAATAAAATTCTCGCTAACCGAACCCAAGAAAAC  377
      | ||||||||||||||||||||| ||||| ||||| |||   ||||| ||
seq2  TTGATGCAAAAATACTCAATAAATTTCTCACTAACGGAATTAAAGAACAC  399

seq1  ATTAAAGCAATCATCCATCATGACCAAGTAGGTTTTATTCCAGGGATTCA  427
      |||||| ||||||| |||| ||||||||||||||||||||||| ||| ||
seq2  ATTAAAACAATCATTCATCCTGACCAAGTAGGTTTTATTCCAGAGATGCA  449

seq1  GGGATGGTTTAATGTACGGAAATCCATCACCATAATCCATTATATAAACA  477
      ||||||||||||| ||| ||||||||||| | ||||||||||||||||||
seq2  GGGATGGTTTAATATACAGAAATCCATCAACGTAATCCATTATATAAACA  499

seq1  AA-ACAAAGACAAAAACCACA  497
      ||  |||||||||||||||||
seq2  AACTCAAAGACAAAAACCACA  520