BAC Information

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BAC

Clone NameB6Ng01-025E11
Chromosome4 (Build37)
Map Location 73,232,948 - 73,233,976
singlet/doubletsinglet
Overlap genenone
Upstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115
Downstream geneOTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025E11.bB6Ng01-025E11.g
ACCDH856675DH856676
length1,016864
definitionDH856675|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E11, 5' end.DH856676|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatgtacctgcattgttaataaagaaacaaggatctaagggg
cccataatatgtctgaggtcatgtgtgaagccacaccaagatgttaacat
tcaatcagtactgaggagtgtagaagagatgagtaacctgcctttgtctt
gaaattaaatcccaacactccaaattatccacattattgattaagtattt
aggggcaccaaataattttctttgagatgaaaaagagagataaacctttg
aggtttagaaaacaaagatttgtataggactacctgtcgtcatacagcat
ggataaatgtatctataaagaacatagtgcttaaatgtttatgtgtagac
cactaactcataatctataagaaaaaaatgtgtaaaggcttttctgtgtg
attccttcctacaaaacacatccagatttgtaagatgtagaattttaatt
gtatttaaaaaaatctaagttacattggtcattaattgagcaggaaaagt
tgagtaggcacatcaaccaggtatcctgaaagacatcttgggccaattta
gtggggatctcagttcttcaagagcttttgtgaaaattcactgggaagat
catttgtctatttgtgatttccttttgttttttctctctttttacatctt
ttggaatacttttattatgtcaattgattttgatgaggtattcctctgag
aaacatacatattcttacagaaagcagactttttccaatggaccttgaag
tgcttgctttctcttcctgtttaaaagacatggcagtctgatgatgtaca
ttctgtacaccgggattttagtattccacatgattgtgtgcacatttgta
gcgggaaaatctgagcaatgaagttgccttttcaaggactctattgcatt
agcatgtgagggatttctgtgagccctttttagtctgagtgtgtggtaaa
attaagggttagtatggagaccagattttcagtattactgtaacaaacaa
aacaaacaaaaacaaa
gaattcctgatctctgcaatacttttaacatgaatgggtgttgtaatttt
tctgcatctaatgcaatgatcatgtgggttttttttttcctttgagtttg
tttatatagtggattattttgatgggtttccccatatttaacaatctctg
catccctgggatgaagcctacttgatcatgatggatgatcattttgatgt
gttcttgaatccggtttgtgagaattttattgaatatttttgcatcatgc
aggaaattagtctgtagttctttttctttgttgggtctttttgtgcttta
ggtatcagtgtaactgtggcttcatagaaagaactgggtattgttcctac
tgtttctgtttcgtggaatagtttgaagagtattggtattagattttctt
tgaaggtctgatagaatttcatctcacaccagtcagaatggttaagatca
aaaactcaggtaacaacagatgttggcaaggatgtggagaaggagggaca
ctcctccattgttgatgagattccaagctggtacaaccactctgaaaatc
agtctggtggttcctcagaaaattggacatagtatcagctgagaacccag
acataccactcctgagcctatactcaaaagatgctccaacatataacaaa
gacacatgttccataatgttcatagcagccttatttataatagccagaag
ctggaaacagcccagattgtccctcaacgtaagaatggatacagaaaatg
tggtatatatacacaatggagtatacacagagattaaaaacattgaggtt
atgaaattctcagcaaaatgatggaactagaaatatcatcctgagtgaac
taacccagacacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73232948_73233976
seq2: B6Ng01-025E11.b_42_1057 (reverse)

seq1  TTTGTTTTTTGTTTGTTTTGTTTTGTTTACAAGTTACTTACTGAAATATC  50
      |||| ||||||||||||||||||   |||| ||| |  |||||||| |||
seq2  TTTG-TTTTTGTTTGTTTTGTTT--GTTAC-AGTAA--TACTGAAA-ATC  43

seq1  TGGTCTACCATAACTAAACCCTTAATCTTTACCCACACACTCAGACTAAA  100
      |||||| |||| ||| |||||||||| |||| ||||||||||||||| ||
seq2  TGGTCT-CCAT-ACT-AACCCTTAAT-TTTA-CCACACACTCAGACT-AA  87

seq1  AAAGTGCTCACAGAAATCCCTCACATGCTAAATGCAATATGAGTCCTTGA  150
      |||| |||||||||||||||||||||||| ||||||||| ||||||||||
seq2  AAAGGGCTCACAGAAATCCCTCACATGCT-AATGCAATA-GAGTCCTTGA  135

seq1  AAAGGCAACTTCATTGGCTCAGATTTTCCCAGCTACAAATGTGCACACAA  200
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  AAAGGCAACTTCATT-GCTCAGATTTTCCC-GCTACAAATGTGCACACAA  183

seq1  TCATGTGGAACTACTAAAATCCCGGTGTACAGAATGTACATCATCAGACT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGAA-TACTAAAATCCCGGTGTACAGAATGTACATCATCAGACT  232

seq1  GCCATGTC-TTTAAACAGGAAGAGAAAGCAAGCACTTCAAGGTCCATTGG  299
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTTTTAAACAGGAAGAGAAAGCAAGCACTTCAAGGTCCATTGG  282

seq1  -AAAAGTCTGCTTTCTGTAAGAATATGTATGTTTCTCAGAGGAATACCTC  348
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTCTGCTTTCTGTAAGAATATGTATGTTTCTCAGAGGAATACCTC  332

seq1  ATCAAAATCAATTGACATAAT-AAAGTATTCCAAAAGATGT-AAAAGAGA  396
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  ATCAAAATCAATTGACATAATAAAAGTATTCCAAAAGATGTAAAAAGAGA  382

seq1  GAAAAAAC-AAAGGAAATCACAAATAGACAAATGATCTTCCCAGTGAATT  445
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACAAAAGGAAATCACAAATAGACAAATGATCTTCCCAGTGAATT  432

seq1  TTCACAAAAGCTCTTGAAGAACTGAGATCCCCACTAAATTGGCCCAAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAAAGCTCTTGAAGAACTGAGATCCCCACTAAATTGGCCCAAGAT  482

seq1  GTCTTTCAGGATACCTGGTTGATGTGCCTACTCAACTTTTCCTGCTCAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAGGATACCTGGTTGATGTGCCTACTCAACTTTTCCTGCTCAAT  532

seq1  TAATGACCAATGTAACTTAGATTTTTTTAAATACAATTAAAATTCTACAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACCAATGTAACTTAGATTTTTTTAAATACAATTAAAATTCTACAT  582

seq1  CTTACAAATCTGGATGTGTTTTGTAGGAAGGAATCACACAGAAAAGCCTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAATCTGGATGTGTTTTGTAGGAAGGAATCACACAGAAAAGCCTT  632

seq1  TACACATTTTTTTCTTATAGATTATGAGTTAGTGGTCTACACATAAACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTTTTTTCTTATAGATTATGAGTTAGTGGTCTACACATAAACAT  682

seq1  TTAAGCACTATGTTCTTTATAGATACATTTATCCATGCTGTATGACGACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACTATGTTCTTTATAGATACATTTATCCATGCTGTATGACGACA  732

seq1  GGTAGTCCTATACAAATCTTTGTTTTCTAAACCTCAAAGGTTTATCTCTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCCTATACAAATCTTTGTTTTCTAAACCTCAAAGGTTTATCTCTC  782

seq1  TTTTTCATCTCAAAGAAAATTATTTGGTGCCCCTAAATACTTAATCAATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATCTCAAAGAAAATTATTTGGTGCCCCTAAATACTTAATCAATA  832

seq1  ATGTGGATAATTTGGAGTGTTGGGATTTAATTTCAAGACAAAGGCAGGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATAATTTGGAGTGTTGGGATTTAATTTCAAGACAAAGGCAGGTT  882

seq1  ACTCATCTCTTCTACACTCCTCAGTACTGATTGAATGTTAACATCTTGGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTCTTCTACACTCCTCAGTACTGATTGAATGTTAACATCTTGGT  932

seq1  GTGGCTTCACACATGACCTCAGACATATTATGGGCCCCTTAGATCCTTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCACACATGACCTCAGACATATTATGGGCCCCTTAGATCCTTGT  982

seq1  TTCTTTATTAACAATGCAGGTACATAAAGAATTC  1029
      ||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTAACAATGCAGGTACATAAAGAATTC  1016