BAC Information

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BAC

Clone NameB6Ng01-025E13
Chromosome4 (Build37)
Map Location 76,215,675 - 76,216,080
singlet/doubletsinglet
Overlap genePtprd
Upstream geneLOC100039884, LOC667845
Downstream geneLOC667858, LOC667862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025E13.bB6Ng01-025E13.g
ACCDH856679DH856680
length1,187400
definitionDH856679|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E13, 5' end.DH856680|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggcaggagctcaaactggacaccgaattttggaatcaggaact
gatacagaggctatggatgcactctacttactggattgctcagtatgttt
tctatggactaggctctccaacatcaaacactaattaagaaaatattctg
caagattggtgcagcttggtattatgacgacatttcttcactcagttgaa
gtcctctcctctcagatgactatagattgtgttaaaccaacataaaacca
acactcacagttaatattatattacacatgatctttaaaaatgtctgcat
catgtgcccataccaactattgttctaaagagatctacataaaatatttt
tctagtccaatgttccaaatactttcaatgttaaatattgaactacgatg
atgtgtccaacataatttataagcaattataaatggtgatatttgaaagt
attaaaaacaaaaattaacaaaatgttgacggagctaaaaaaaaaaaccc
acctttaaaagctaaaaccatacagtggaaaaaagacagcattgtcaaca
aatggtgctggttcaactggaggttagcatgtagaagaatgcaaatcaat
ccattcttaactcctggtacaaagctcacatccaagtagatcaaggacct
ccacataaaaccagatacagtgaaactaattgaaaagaaagtggggaaga
gcctcaagcaaatgggcacagggggaaaatgtcctgaacagaacaccagt
agcttatgctataagatcaagaattgacaaatgggacctcataaaattgc
aaagcttctgtaaggcaaaagacattgtcaataagacaaatagcaacgac
accattggggaaagacctttaccaaccctacatccgatagagggctagta
tctaatatatagaaggactcagaagttaaaatccagataatcaatttacc
ccttttaaaaatggatacagagctaaacaaagaattcccaactgagaata
ccgaatgcctgaaagcacctaaggaatttcaacatcattagtcttctgtg
aatgtattttaaaaaaccctggagattcccctcccacgtgcgaaaattaa
atcatattcagtgaagctaaggtggtggagaaccggaaaaggaaaaaccc
tctccttgttgggtggggaaaaacgggcaacagcccg
agaggcaatggacaactcaaaggaaacagcatcttatatatgcaggagga
ctgataggtatatgaactccgatactatggctacatgcataagacctgaa
ggttcaagccaggaacattcccagcactgagaaggagattcagacacagg
gtgccatccctaacctgttagcaaatagaaaataaaaaaaaaacatatca
gttctctctgatggagtagatgaggtatatcatattccagggcaggttct
atgctcaggaacagttaagtaatacaaaatgtattccatgtttgcttgtt
tggttttgtgtgtgtgttcgttttgattttcattttcattttgtttgaga
gagagagaatgagaaagagcataaatcagggtgggtatggagggggagga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76215675_76216080
seq2: B6Ng01-025E13.g_67_472

seq1  GAATTCAGAGGCAATGGACAACTCAAAGGAAACAGCATCTTATATATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCAATGGACAACTCAAAGGAAACAGCATCTTATATATGCA  50

seq1  GGAGGACTGATAGGTATATGAACTCCGATACTATGGCTACATGCATAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACTGATAGGTATATGAACTCCGATACTATGGCTACATGCATAAGA  100

seq1  CCTGAAGGTTCAAGCCAGGAACATTCCCAGCACTGAGAAGGAGATTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGTTCAAGCCAGGAACATTCCCAGCACTGAGAAGGAGATTCAGA  150

seq1  CACAGGGTGCCATCCCTAACCTGTTAGCAAATAGAAAATAAAAAAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTGCCATCCCTAACCTGTTAGCAAATAGAAAATAAAAAAAAAAC  200

seq1  ATATCAGTTCTCTCTGATGGAGTAGATGAGGTATATCATATTCCAGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGTTCTCTCTGATGGAGTAGATGAGGTATATCATATTCCAGGGCA  250

seq1  GGTTCTATGCTCAGGAACAGTTAAGTAATACAAAATGTATTCCATGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTATGCTCAGGAACAGTTAAGTAATACAAAATGTATTCCATGTTTG  300

seq1  CTTGTTTGGTTTTGTGTGTGTGTTCGTTTTGATTTTCATTTTCATTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTGGTTTTGTGTGTGTGTTCGTTTTGATTTTCATTTTCATTTTGT  350

seq1  TTGAGAGAGAGAGAATGAGAAAGAGCATAAATCAGGGTGGGTATGGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGAGAGAGAATGAGAAAGAGCATAAATCAGGGTGGGTATGGAGGG  400

seq1  GGAGGA  406
      ||||||
seq2  GGAGGA  406