BAC Information

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BAC

Clone NameB6Ng01-025E14
Chromosome4 (Build37)
Map Location 97,294,585 - 97,469,889
singlet/doubletdoublet
Overlap geneNfia
Upstream geneCyp2j5, LOC100039415, LOC620779, LOC620883, EG638698
Downstream geneLOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl, L1td1, Ankrd38
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025E14.bB6Ng01-025E14.g
ACCDH856681DH856682
length4801,073
definitionDH856681|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E14, 5' end.DH856682|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,469,411 - 97,469,889)(97,294,585 - 97,295,676)
sequence
gattcatttgtcttattcatggcttaaaaaataaataaatggtatgccaa
gaaaaataatcaaaggtcctcacccttaccagtagaaaccatagccccac
cctgggaaggctgcattgcatgtgtgcatgagagaggagtcaacatagac
agacactgaagggtagacacgaaaatggcaacttacgtcatgaggtagag
ctatccacagagaaaacaccaaagagtgacaaggtgtaacactggctaaa
atgtgtaaccagagctagatcatcacacaaaacttaactgttgttctata
ccagaaaccaaagtagaatataatctgaaaatacaggtgacacatatcac
atccctgaaagtttctaggcctagatgaaaacaattcaatgtaagacaag
accaagatacaagaaaggcataccatattcatagataggatctgatagtt
gttgttggtggtggtggtgctggtggtggt
gaattctctccagattagtgatggcagcattggtttctacaaaacaccaa
ggggaagatggtcccaaactcccagaaggagctttgcaggagactgaatt
tgtatgtttacacattgggacaactcaaagacacaacggaagaagccttg
acagaaagaaccaggcagacagcaaggctcatgggtagaagcactagcta
gctctagcgttaaacaggccaaagtttgtggggtctcattctgatccttg
atggctgtgcaaactgggaccaattatctccctctctgggcttacacctc
tcccataatgaaatggggtaatagtttatcttatagcaataggagaaatc
atgaacttccaaatctgtcttaaagggcaagctacattccctgctagaca
actgaaacacagaactctggtttgtattgagcctctgcctcctggctcaa
actttagtgcaggtgtctacaaaactcaggcatttctcatagtgaccccc
tctgctgatggcagtgccggtgtgaattacaatttcagtcttccacctct
ttcttcctaccactcctgccctcttggccttactctcccattctaatgtc
ttctcacacagacccttcaccaccataacacccctaaaaagaacatgccc
ttctcaatgtgttctgtcttctagggaggcaatcgctctcactgagagcc
aaggagggaaggaaaggtgatgtccgtggcaaggaatctctctgagccac
ccacctccttcaaaagcactttgccactgcatttgctctcctttcatcct
accctactatggatggcagcagctgacacacagtaggtgatcatacaagc
tatttataatgtacttgtgcctgcagctccttgcctgggccagaaaggag
aggagccagagtaagaaaggctttttgggtctccagagatgatcctgcat
ttcagttacaagagaaatgttgctctctgggaaatgggctgcagagccag
catttccctctgagctcactcacccactttgatgctctccactccagtac
tactaccctgcgagttcccatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_97469411_97469889
seq2: B6Ng01-025E14.b_30_508 (reverse)

seq1  ACCACCACCAGCACCACCACCACCAACAACAACTATCAGATCCTATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACCAGCACCACCACCACCAACAACAACTATCAGATCCTATCTAT  50

seq1  GAATATGGTATGCCTTTCTTGTATCTTGGTCTTGTCTTACATTGAATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGGTATGCCTTTCTTGTATCTTGGTCTTGTCTTACATTGAATTGT  100

seq1  TTTCATCTAGGCCTAGAAACTTTCAGGGATGTGATATGTGTCACCTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTAGGCCTAGAAACTTTCAGGGATGTGATATGTGTCACCTGTAT  150

seq1  TTTCAGATTATATTCTACTTTGGTTTCTGGTATAGAACAACAGTTAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATTATATTCTACTTTGGTTTCTGGTATAGAACAACAGTTAAGTT  200

seq1  TTGTGTGATGATCTAGCTCTGGTTACACATTTTAGCCAGTGTTACACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGATGATCTAGCTCTGGTTACACATTTTAGCCAGTGTTACACCTT  250

seq1  GTCACTCTTTGGTGTTTTCTCTGTGGATAGCTCTACCTCATGACGTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCTTTGGTGTTTTCTCTGTGGATAGCTCTACCTCATGACGTAAGT  300

seq1  TGCCATTTTCGTGTCTACCCTTCAGTGTCTGTCTATGTTGACTCCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTCGTGTCTACCCTTCAGTGTCTGTCTATGTTGACTCCTCTCT  350

seq1  CATGCACACATGCAATGCAGCCTTCCCAGGGTGGGGCTATGGTTTCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACATGCAATGCAGCCTTCCCAGGGTGGGGCTATGGTTTCTACT  400

seq1  GGTAAGGGTGAGGACCTTTGATTATTTTTCTTGGCATACCATTTATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGGTGAGGACCTTTGATTATTTTTCTTGGCATACCATTTATTTAT  450

seq1  TTTTTAAGCCATGAATAAGACAAATGAAT  479
      |||||||||||||||||||||||||||||
seq2  TTTTTAAGCCATGAATAAGACAAATGAAT  479

seq1: chr4_97294585_97295676
seq2: B6Ng01-025E14.g_69_1141

seq1  GAATTCTCTCCAGATTAGTGATGGCAGCATTGGTTTCTACAAAACACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCAGATTAGTGATGGCAGCATTGGTTTCTACAAAACACCAA  50

seq1  GGGGAAGATGGTCCCAAACTCCCAGAAGGAGCTTTGCAGGAGACTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGATGGTCCCAAACTCCCAGAAGGAGCTTTGCAGGAGACTGAATT  100

seq1  TGTATGTTTACACATTGGGACAACTCAAAGACACAACGGAAGAAGCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTTACACATTGGGACAACTCAAAGACACAACGGAAGAAGCCTTG  150

seq1  ACAGAAAGAACCAGGCAGACAGCAAGGCTCATGGGTAGAAGCACTAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGAACCAGGCAGACAGCAAGGCTCATGGGTAGAAGCACTAGCTA  200

seq1  GCTCTAGCGTTAAACAGGCCAAAGTTTGTGGGGTCTCATTCTGATCCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGCGTTAAACAGGCCAAAGTTTGTGGGGTCTCATTCTGATCCTTG  250

seq1  ATGGCTGTGCAAACTGGGACCAATTATCTCCCTCTCTGGGCTTACACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTGCAAACTGGGACCAATTATCTCCCTCTCTGGGCTTACACCTC  300

seq1  TCCCATAATGAAATGGGGTAATAGTTTATCTTATAGCAATAGGAGAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAATGAAATGGGGTAATAGTTTATCTTATAGCAATAGGAGAAATC  350

seq1  ATGAACTTCCAAATCTGTCTTAAAGGGCAAGCTACATTCCCTGCTAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTCCAAATCTGTCTTAAAGGGCAAGCTACATTCCCTGCTAGACA  400

seq1  ACTGAAACACAGAACTCTGGTTTGTATTGAGCCTCTGCCTCCTGGCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACACAGAACTCTGGTTTGTATTGAGCCTCTGCCTCCTGGCTCAA  450

seq1  ACTTTAGTGCAGGTGTCTACAAAACTCAGGCATTTCTCATAGTGACCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGTGCAGGTGTCTACAAAACTCAGGCATTTCTCATAGTGACCCCC  500

seq1  TCTGCTGATGGCAGTGCCGGTGTGAATTACAATTTCAGTCTTCCACCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGATGGCAGTGCCGGTGTGAATTACAATTTCAGTCTTCCACCTCT  550

seq1  TTCTTCCTACCACTCCTGCCCTCTTGGCCTTACTCTCCCATTCTAATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTACCACTCCTGCCCTCTTGGCCTTACTCTCCCATTCTAATGTC  600

seq1  TTCTCACACAGACCCTTCACCACCATAACACCCCTAAAAAGAACATGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACACAGACCCTTCACCACCATAACACCCCTAAAAAGAACATGCCC  650

seq1  TTCTCAATGTGTTCTGTCTTCTAGGGAGGCAATCGCTCTCACTGAGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATGTGTTCTGTCTTCTAGGGAGGCAATCGCTCTCACTGAGAGCC  700

seq1  AAGGAGGGAAGGAAAGGTGATGTCCGTGGCAAGGAATCTCTCTGAGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGAAGGAAAGGTGATGTCCGTGGCAAGGAATCTCTCTGAGCCAC  750

seq1  CCACCTCCTTCAAAAGCACTTTGCCACTGCATTTGCTCTCCTTTCATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCTTCAAAAGCACTTTGCCACTGCATTTGCTCTCCTTTCATCCT  800

seq1  ACCCTACTATGGATGGCAGCAGCTGACACACAGTAGGTGATCAATACAAG  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCCTACTATGGATGGCAGCAGCTGACACACAGTAGGTGATC-ATACAAG  849

seq1  CTATTTATAATGTACTTGTGCCTGCAGCTCCTTGCCTGGGCCAGAAAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTATTTATAATGTACTTGTGCCTGCAGCTCCTTGCCTGGGCCAGAAA-GG  898

seq1  AGAGGAGCCAGAGAAAGAAAAGGCTTTTTGGGTCTCCAGAAGATGATCCT  950
      ||||||||||||| ||| ||||||||||||||||||||| ||||||||||
seq2  AGAGGAGCCAGAGTAAG-AAAGGCTTTTTGGGTCTCCAG-AGATGATCCT  946

seq1  GCATTTCAGTTAACAAAGAGAAAATGTTGCTCTCCTTGGGAAATGGGCTG  1000
      ||||||||||||   ||||| |||||||||||||  ||||||||||||||
seq2  GCATTTCAGTTA--CAAGAG-AAATGTTGCTCTC--TGGGAAATGGGCTG  991

seq1  CAGAGCCCAGCATTTCCCTCTGAAGCTTCTCTCACCCACTTTTGATTCCT  1050
      ||||| |||||||||||||||| ||| || ||||||||| ||||| | ||
seq2  CAGAG-CCAGCATTTCCCTCTG-AGC-TCACTCACCCAC-TTTGA-TGCT  1036

seq1  CTCCACTCCCAGTACTACCTACCCCTGCGAAGTTCCCCATCT  1092
      ||||||| ||||||||| ||| ||||||| |||| |||||||
seq2  CTCCACT-CCAGTACTA-CTA-CCCTGCG-AGTT-CCCATCT  1073