BAC Information

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BAC

Clone NameB6Ng01-026A19
Chromosome4 (Build37)
Map Location 146,552,282 - 146,553,216
singlet/doubletsinglet
Overlap geneOTTMUSG00000010657
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
Downstream geneLOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026A19.b
ACCDH857203
length925
definitionDH857203|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagattgcctttttcctaaagcatttctcacatacaatgcatt
tgtaaggtttctctcctgtatgaattctctgatgaatattaagatgagat
ttttgggtaaagcatttgtcacattcactacatttgtaaggtttctctcc
tgtatgaattctctgatgaatattaagatgaaatttgtgggtaaggcgtt
tgtcacattcactacatttataaattttctcttctgcatgaattccctga
tggatactaagatcgatctgatgggtaaagcatttgtcacttttactact
tctgtaacgtttcttttcatgataaattctctgctgactttgaagtttgt
ctctctgggtaagatatttgtcaaatttactacatttgtaagggttcact
ccagtattatttcgtttcaccatgactttatgtttagaaataaaagcctt
ctcagattctgcatttccgttgtgttttttcttctgcatgtggattccct
gattgagactaatggaagaaaacaaagttaaactgtttacagagtcattg
tatttgcaaacttttttattgttcctgggcttaagtcttttttggttcga
aaattgaagagcatcagaggtgtgattagtcttgtaaggtgtacattggg
aggcttcaagtatcacattgctaagtttgtcccatttagaagacttctct
tgaatattcatgtgttcatggacatgtactggctgtcttgatccaagacc
ttctcatactttccacatatgcaatgattttctgaaaaaaagtggggagg
ggcaattagaggtgacatgaattacttatatacgagtaagtgattcataa
tcagtgatctctggattcgtactctcagagagttttctctttatttgaat
cattacatgtatcctcaaagaactt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146552282_146553216
seq2: B6Ng01-026A19.b_37_961 (reverse)

seq1  AAGTTCTTTTGAGGATACATGTAATGATTCAAAAAAAGGAGAAAAACCTC  50
      |||||| |||||||||||||||||||||||||| ||| |||||||  |||
seq2  AAGTTC-TTTGAGGATACATGTAATGATTCAAATAAA-GAGAAAA--CTC  46

seq1  TCTTGAGAGTACGAATCCATGAGATCACTGATTATTGAATCACTTACTCC  100
      || |||||||||||||||| |||||||||||||| ||||||||||||| |
seq2  TC-TGAGAGTACGAATCCA-GAGATCACTGATTA-TGAATCACTTACT-C  92

seq1  TTATATAAGTAATTCATGTCACCTCTAATTGCCCCTCCCTACTTTTTTTC  150
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTATATAAGTAATTCATGTCACCTCTAATTGCCCCTCCCCACTTTTTTTC  142

seq1  AGAAAATCATTGCATATGTGGAAAGTATGAGAAGGTCTTGGATCAAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCATTGCATATGTGGAAAGTATGAGAAGGTCTTGGATCAAGACA  192

seq1  GCCAGTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAA  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACA-TGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAA  241

seq1  TGGGACAAACTTAGCAATGTGATACTTGAAGCCCCCCAATGTACACCTTA  300
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGGACAAACTTAGCAATGTGATACTTGAAGCCTCCCAATGTACACCTTA  291

seq1  CAAAACTAATCACACCTCTGATGCTCTTCAATTTTCGAACCAAAAAAGAC  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTAATCACACCTCTGATGCTCTTCAATTTTCGAACCAAAAAAGAC  341

seq1  TTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAAC  400
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  TTAAGCCCAGGAACAATAAAAAAGTTTGCAAATACAATGACTCTGTAAAC  391

seq1  AGTTTAACTTTGTTTTCTACCATTAGTCTCAATCAGGGAATCCACATGCA  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTTTAACTTTGTTTTCTTCCATTAGTCTCAATCAGGGAATCCACATGCA  441

seq1  GAAGAAAAAACACAACGGAAATGCAGAATCTGAGAAGGCTTTTATTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAACACAACGGAAATGCAGAATCTGAGAAGGCTTTTATTTCTA  491

seq1  AACATAAAGTCATGGTGAAACGAAATAATACTGGAGTGAACCCTTACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAGTCATGGTGAAACGAAATAATACTGGAGTGAACCCTTACAAA  541

seq1  TGTAGTAAATTTGACAAATATCTTACCCAGAGAGACAAACTTCAAAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAAATTTGACAAATATCTTACCCAGAGAGACAAACTTCAAAGTCA  591

seq1  GCAGAGAATTTATCATGAAAAGAAACATTACAGAAGTAGTAAAAGTGACA  650
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAGAGAATTTATCATGAAAAGAAACGTTACAGAAGTAGTAAAAGTGACA  641

seq1  AATGCTTTACCCATCAGATCGATCTTAGTATCCATCAGGGAATTCATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTACCCATCAGATCGATCTTAGTATCCATCAGGGAATTCATGCA  691

seq1  GAAGAGAAAATTTATAAATGTAGTGAATGTGACAAATGCTTTACCCACAA  750
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  GAAGAGAAAATTTATAAATGTAGTGAATGTGACAAACGCCTTACCCACAA  741

seq1  ATTTCATCTTAATATTCATCAGAGAATTCATACAGGAGAGAAACCTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCTTAATATTCATCAGAGAATTCATACAGGAGAGAAACCTTACA  791

seq1  AATGTAGTGAATGTGACAAATGCTTTACCCAAAAATCTCATCTTAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTGAATGTGACAAATGCTTTACCCAAAAATCTCATCTTAATATT  841

seq1  CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCATTGTATGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCATTGTATGTGA  891

seq1  GAAATGCTTTACTGAAAAAGGCAATCTGAGAATTC  935
      |||||||||||  ||||||||||||||||||||||
seq2  GAAATGCTTTA-GGAAAAAGGCAATCTGAGAATTC  925