BAC Information

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BAC

Clone NameB6Ng01-026I07
Chromosome4 (Build37)
Map Location 141,132,703 - 141,295,155
singlet/doubletdoublet
Overlap geneFblim1, BC025833, Slc25a34, Plekhm2, Ddi2
Upstream geneArhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1, Padi2, Sdhb, Atp13a2, Mfap2, Crocc, Necap2, LOC638991, Spata21, D4Ertd22e, Fbxo42, 6330545A04Rik, Arhgef19, Epha2, Gm693, Clcnka, Clcnkb, Hspb7, Gm694, Zbtb17, Spen, LOC100042951, B330016D10Rik
Downstream geneAgmat, Dnajc16, Casp9, Ela2a, Ctrc, Efhd2, Fhad1, Tmem51, 9030409G11Rik, EG665983, LOC546484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I07.bB6Ng01-026I07.g
ACCDH857538DH857539
length883805
definitionDH857538|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I07, 5' end.DH857539|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,132,703 - 141,133,586)(141,294,357 - 141,295,155)
sequence
gaattctatgaagtctaagcaggtcgcaagcttctggcaatttcccccag
cactgggatcacagatttgcaccaccaaaccccagtagtttgtgcatttt
aagattgtagctgtggctgccttcaaatgcagagatccatgtgtctctgc
ctcccaagtactgagattaaaggtgtttgccattagacatggctaaattg
tttttttttttttaatgtatgtgtgtgtgcctgagtgtaagcgtgtacac
cacatgcattaaggttccaaggaggccagcagagggcgccagctctccgg
aaactggagttgcaggacaggtagttatgagcctccatgagggatgctgg
gaaatgaactctggtcctccgcaagaggagcaagagctcgctcttcatca
ccgagccatcttcgcagcccctgaaccaagggaagatgtttactgatttt
accccaccaaaaaaagaaaaagagaaaaattcaaagatttctctccccca
aatccaaagaatattgttttgaatcttttagtagatcagactagattgaa
catagaaatccacctgcctctgcctcccaagtgctgggattaaaggtgtg
tgctatcatgtctactacacacttatattctcaaaaaatactttttggag
tggctgagaaggcgcacttcaaacaacttagctctacaatctaagctgag
gtctcagcgccttctgctaggcagctaagcatcatggtcagagacacagg
tatcatcctgagacctgtccccataaacatgtcaggcagcactagagatg
gaccagggttgcagtctggtggtgagaggcctcctggtcaatgaagggag
aggagtagaaagtctgggggtggggggtgctgt
gaattcttcatgtaaaccaatgaccagtgttacctcaaactcacagagat
cagccagcctctatttcccaagtgctgggattaaaggcctagggcgacat
ggctggccagtacaaccaaccacatcctgatccaaactccgaagtaatcg
gtctcccctacactgtccagtctaaaatgagcttcctaggtcatgagaaa
gcgagggagcatacatttacatacaggagagacccagccagtgatgggaa
aagatcatcggagttcaaccttgctggagtcagactgggaggggatacaa
gattgtctgcatgatcatctaacagaaaggaaaggtggaaccagggcggt
ggacgggggtctccttcaatcactcagtcactgggcacgatgtgtgttac
tattagcacaggttatccatgctcccttcaaacagcagccaagggagcca
gagatgcaggtcagtgggagagcatttgctgggcaagctcaagcattaag
agtctttaacacgggatctctctacagtcgacacatatatgtgaaattat
gtgaaattcctgggctcaggtcatactcctgtgtagccagtgtttcccat
ctgactgaaataaagtcatcctttatgttttggggtactggggatcaaaa
cccagggcttttgtgcattgcatgtactggctgtgaactgtccttttttt
tttttttttttaaagatttatttattttatatataagagtacactgtggt
tttttttgagacacacctaaagagggcattggatttcattacagatgtgt
tgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_141132703_141133586
seq2: B6Ng01-026I07.b_44_926

seq1  GAATTCTATGAAGTCTAAGCAGGTCGCAAGCTTCTGGCAATTTCCCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAAGTCTAAGCAGGTCGCAAGCTTCTGGCAATTTCCCCCAG  50

seq1  CACTGGGATCACAGATTTGCACCACCAAACCCCAGTAGTTTGTGCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGATCACAGATTTGCACCACCAAACCCCAGTAGTTTGTGCATTTT  100

seq1  AAGATTGTAGCTGTGGCTGCCTTCAAATGCAGAGATCCATGTGTCTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTAGCTGTGGCTGCCTTCAAATGCAGAGATCCATGTGTCTCTGC  150

seq1  CTCCCAAGTACTGAGATTAAAGGTGTTTGCCATTAGACATGGCTAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTACTGAGATTAAAGGTGTTTGCCATTAGACATGGCTAAATTG  200

seq1  TTTTTTTTTTTTTAATGTATGTGTGTGTGCCTGAGTGTAAGCGTGTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAATGTATGTGTGTGTGCCTGAGTGTAAGCGTGTACAC  250

seq1  CACATGCATTAAGGTTCCAAGGAGGCCAGCAGAGGGCGCCAGCTCTCCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATTAAGGTTCCAAGGAGGCCAGCAGAGGGCGCCAGCTCTCCGG  300

seq1  AAACTGGAGTTGCAGGACAGGTAGTTATGAGCCTCCATGAGGGATGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAGTTGCAGGACAGGTAGTTATGAGCCTCCATGAGGGATGCTGG  350

seq1  GAAATGAACTCTGGTCCTCCGCAAGAGGAGCAAGAGCTCGCTCTTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAACTCTGGTCCTCCGCAAGAGGAGCAAGAGCTCGCTCTTCATCA  400

seq1  CCGAGCCATCTTCGCAGCCCCTGAACCAAGGGAAGATGTTTACTGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCCATCTTCGCAGCCCCTGAACCAAGGGAAGATGTTTACTGATTTT  450

seq1  ACCCCACCAAAAAAAGAAAAAGAGAAAAATTCAAAGATTTCTCTCCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCAAAAAAAGAAAAAGAGAAAAATTCAAAGATTTCTCTCCCCCA  500

seq1  AATCCAAAGAATATTGTTTTGAATCTTTTAGTAGATCAGACTAGATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAGAATATTGTTTTGAATCTTTTAGTAGATCAGACTAGATTGAA  550

seq1  CATAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTG  600

seq1  TGCTATCATGTCTACTACACACTTATATTCTCAAAAAATACTTTTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCATGTCTACTACACACTTATATTCTCAAAAAATACTTTTTGGAG  650

seq1  TGGCTGAGAAGGCGCACTTCAAACAACTTAGCTCTACAATCTAAGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAGAAGGCGCACTTCAAACAACTTAGCTCTACAATCTAAGCTGAG  700

seq1  GTCTCAGCGCCTTCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGCGCCTTCTGCTAGGCAGCTAAGCATCATGGTCAGAGACACAGG  750

seq1  TATCATCCTGAGACCTGTCCCCATAAACATGTCAGGGCAGCACTAGAGAT  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TATCATCCTGAGACCTGTCCCCATAAACATGTCA-GGCAGCACTAGAGAT  799

seq1  GGACCAGGGTTGCAGTCTGGTGGTGAGAGGCCTCCTGGTCAATGAAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGGGTTGCAGTCTGGTGGTGAGAGGCCTCCTGGTCAATGAAGGGA  849

seq1  GAGGAGTAGAAAGTCTGGGGGTGGGGGGTGCTGT  884
      ||||||||||||||||||||||||||||||||||
seq2  GAGGAGTAGAAAGTCTGGGGGTGGGGGGTGCTGT  883

seq1: chr4_141294357_141295155
seq2: B6Ng01-026I07.g_71_875 (reverse)

seq1  TCACAAC-CATCTGTAATGAAATCCAATGCCCTCTTCTGGTGTGTCTC-A  48
      ||||||| ||||||||||||||||||||||||||||  |||||||||| |
seq2  TCACAACACATCTGTAATGAAATCCAATGCCCTCTTTAGGTGTGTCTCAA  50

seq1  AGACAACCACAGTGTACTCTTATATATAAAATAAATAAATCTTT--AAAA  96
      | | ||||||||||||||||||||||||||||||||||||||||  ||||
seq2  AAAAAACCACAGTGTACTCTTATATATAAAATAAATAAATCTTTAAAAAA  100

seq1  AAAAAAAAAAAAGGACAGTTCACAGCCAGTACATGCAATGCAC-AAAGCC  145
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAAAAAAAAAGGACAGTTCACAGCCAGTACATGCAATGCACAAAAGCC  150

seq1  CTGGG-TTTGATCCCCAGTACCCCAAAACATAAAGGATGACTTTATTTCA  194
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTTGATCCCCAGTACCCCAAAACATAAAGGATGACTTTATTTCA  200

seq1  GTCAGATGGGAAACACTGGCTACACAGGAGTATGACCTGAGCCCAGGAAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGGGAAACACTGGCTACACAGGAGTATGACCTGAGCCCAGGAAT  250

seq1  TTCACATAATTTCACATATATGTGTCGACTGTAGAGAGATCCCGTGTTAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAATTTCACATATATGTGTCGACTGTAGAGAGATCCCGTGTTAA  300

seq1  AGACTCTTAATGCTTGAGCTTGCCCAGCAAATGCTCTCCCACTGACCTGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTAATGCTTGAGCTTGCCCAGCAAATGCTCTCCCACTGACCTGC  350

seq1  ATCTCTGGCTCCCTTGGCTGCTGTTTGAAGGGAGCATGGATAACCTGTGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGCTCCCTTGGCTGCTGTTTGAAGGGAGCATGGATAACCTGTGC  400

seq1  TAATAGTAACACACATCGTGCCCAGTGACTGAGTGATTGAAGGAGACCCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTAACACACATCGTGCCCAGTGACTGAGTGATTGAAGGAGACCCC  450

seq1  CGTCCACCGCCCTGGTTCCACCTTTCCTTTCTGTTAGATGATCATGCAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCACCGCCCTGGTTCCACCTTTCCTTTCTGTTAGATGATCATGCAGA  500

seq1  CAATCTTGTATCCCCTCCCAGTCTGACTCCAGCAAGGTTGAACTCCGATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTGTATCCCCTCCCAGTCTGACTCCAGCAAGGTTGAACTCCGATG  550

seq1  ATCTTTTCCCATCACTGGCTGGGTCTCTCCTGTATGTAAATGTATGCTCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCCCATCACTGGCTGGGTCTCTCCTGTATGTAAATGTATGCTCC  600

seq1  CTCGCTTTCTCATGACCTAGGAAGCTCATTTTAGACTGGACAGTGTAGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTTTCTCATGACCTAGGAAGCTCATTTTAGACTGGACAGTGTAGGG  650

seq1  GAGACCGATTACTTCGGAGTTTGGATCAGGATGTGGTTGGTTGTACTGGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCGATTACTTCGGAGTTTGGATCAGGATGTGGTTGGTTGTACTGGC  700

seq1  CAGCCATGTCGCCCTAGGCCTTTAATCCCAGCACTTGGGAAATAGAGGCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGTCGCCCTAGGCCTTTAATCCCAGCACTTGGGAAATAGAGGCT  750

seq1  GGCTGATCTCTGTGAGTTTGAGGTAACACTGGTCATTGGTTTACATGAAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATCTCTGTGAGTTTGAGGTAACACTGGTCATTGGTTTACATGAAG  800

seq1  AATTC  799
      |||||
seq2  AATTC  805