BAC Information

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BAC

Clone NameB6Ng01-027B14
Chromosome4 (Build37)
Map Location 125,264,171 - 125,432,022
singlet/doubletdoublet
Overlap geneGrik3
Upstream genePou3f1, Utp11l, Fhl3, Sf3a3, LOC664991, Inpp5b, LOC100039433, Mtf1, Yrdc, Gm50, Epha10, Cdca8, 9930104L06Rik, Rspo1, Gnl2, Dnali1, Snip1, 2310005N01Rik, Zc3h12a, LOC100039298, Ftl2
Downstream geneCsf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027B14.bB6Ng01-027B14.g
ACCDH857939DH857940
length995957
definitionDH857939|Mus musculus domesticus DNA, BAC clone: B6Ng01-027B14, 5' end.DH857940|Mus musculus domesticus DNA, BAC clone: B6Ng01-027B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,264,171 - 125,265,176)(125,431,059 - 125,432,022)
sequence
gaattctggcctggattcctgggtagcatgcaaccacgaagggtttgggg
aagcaatgcagctatgttcaagtctggtgaggcttttatgtataggtggg
atgtgccaggctacacatacacacaccaagtagaatgctgctctcagccc
tctgaactagatagtcagccagggctgaatccaaaaccaaggacttgtga
cactcttctgtttataacaaatctggcacaccgcacaccgcacaacacct
cagactcacttctgtcttaagatggcctgtggagagagatatgggtgatg
acatggagtctgcatagatccagaggtgcaggcagaggtggctgtggccc
aggatgccagaggccagctgagacttcagtgagtctgcttccactgctca
agcttctgttggcctcttcacaggtccccacccaactctgggagcagcca
tactgctttctacacagacacaaccttgaaagagccctgtggatggcccc
aagaccttcccagctccccaaggtagatcccttctggcaggctagctggg
ggcacccccaactctttcccaacccttttctttgagtgtcgcaaaaggtc
tcatgcttagcagatcctggggagcccagcagaaaggtagacaatctgtt
ttttctcgtatctgtgaaataaagaattggagggcaaagtggggcttggg
ggtctccaattatctctctccccctgcccctcaggggcctcactttcttc
ccctacagctcaccggcagtcaacagcctctcaaacctgttgaaatccat
taccgacctttggtctcagccaccacaaaggagctttgcacagtgcgcag
cggataaacagaaatgaattggccgagggaggctttgcgacctcggcgtt
cccgcctcctcttccccctctcttcttctatctcacttttatatgatttt
ttttttgggaagcagctgggcagagctagataggagaaccgatcc
gaattccacttcagaagaccagtcaaagggttttctctgtcgcacagcct
cagaccctcaagaacaggcagtaggaaaggatgtccagctccctcaaccc
agcatcctaccggccttctctcacttcttcccccttgttctccaatccag
actctgggccccgtggctttgtcctgactcagcagagggccaggcagagg
ctgcacagatctgggggtctgtgcagtggttagaggagagacctaccagg
gagggctgcagttcaggtggcaagcatctgttagactcagtctgggtcca
tgataatggcagcaagaagtactataggttatgggggactcaaatctagt
cagatcactccctgatgaaaatgttccatggccctctatgccccttgaga
cctggatggagccatgcctgaagcctcattagcatcttgcttttccatca
gttgagccatgtgctgcccatgactttaaggggtttctgttctttgtaac
aaaagagccccagaaatgctcagggttttgagatgtagtatggatattct
gccttggggatcctctgaggcaaaaagtaaaacttcactgtttttactaa
aaggcctcacttgtcattgtacagatagagacacttagcctccaagagac
aagttcatgggcgcagaactctgcagccaatcccacagcacccagaggag
gctccactcccaggcactctagcatgcccagaattgtacgatcgatcagg
tgagtaggacacaacatctgtttccataccactgggagtaactgggacca
gcagacgcaaggacacagtggctctggttccttccagcctgcaccagttt
ccttgggcatgaactccacagccagtccaacagcacccagagagctcaaa
tcccagcgctctaacacacctaggatcccagattcagattccaggatcca
aggatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_125264171_125265176
seq2: B6Ng01-027B14.b_43_1037

seq1  GAATTCTGGCCTGGATTCCTGGGTAGCATGCAACCACGAAGGGTTTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCCTGGATTCCTGGGTAGCATGCAACCACGAAGGGTTTGGGG  50

seq1  AAGCAATGCAGCTATGTTCAAGTCTGGTGAGGCTTTTATGTATAGGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGCAGCTATGTTCAAGTCTGGTGAGGCTTTTATGTATAGGTGGG  100

seq1  ATGTGCCAGGCTACACATACACACACCAAGTAGAATGCTGCTCTCAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCAGGCTACACATACACACACCAAGTAGAATGCTGCTCTCAGCCC  150

seq1  TCTGAACTAGATAGTCAGCCAGGGCTGAATCCAAAACCAAGGACTTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTAGATAGTCAGCCAGGGCTGAATCCAAAACCAAGGACTTGTGA  200

seq1  CACTCTTCTGTTTATAACAAATCTGGCACACCGCACACCGCACAACACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCTGTTTATAACAAATCTGGCACACCGCACACCGCACAACACCT  250

seq1  CAGACTCACTTCTGTCTTAAGATGGCCTGTGGAGAGAGATATGGGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCACTTCTGTCTTAAGATGGCCTGTGGAGAGAGATATGGGTGATG  300

seq1  ACATGGAGTCTGCATAGATCCAGAGGTGCAGGCAGAGGTGGCTGTGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGTCTGCATAGATCCAGAGGTGCAGGCAGAGGTGGCTGTGGCCC  350

seq1  AGGATGCCAGAGGCCAGCTGAGACTTCAGTGAGTCTGCTTCCACTGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCCAGAGGCCAGCTGAGACTTCAGTGAGTCTGCTTCCACTGCTCA  400

seq1  AGCTTCTGTTGGCCTCTTCACAGGTCCCCACCCAACTCTGGGAGCAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGTTGGCCTCTTCACAGGTCCCCACCCAACTCTGGGAGCAGCCA  450

seq1  TACTGCTTTCTACACAGACACAACCTTGAAAGAGCCCTGTGGATGGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTTCTACACAGACACAACCTTGAAAGAGCCCTGTGGATGGCCCC  500

seq1  AAGACCTTCCCAGCTCCCCAAGGTAGATCCCTTCTGGCAGGCTAGCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTTCCCAGCTCCCCAAGGTAGATCCCTTCTGGCAGGCTAGCTGGG  550

seq1  GGCACCCCCAACTCTTTCCCAACCCTTTTCTTTGAGTGTCGCAAAAGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCCCAACTCTTTCCCAACCCTTTTCTTTGAGTGTCGCAAAAGGTC  600

seq1  TCATGCTTAGCAGATCCTGGGGAGCCCAGCAGAAAGGTAGACAATCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTAGCAGATCCTGGGGAGCCCAGCAGAAAGGTAGACAATCTGTT  650

seq1  TTTTCTCGTATCTGTGAAATAAAGAATTGGAGGGCAAAGTGGGGCTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGTATCTGTGAAATAAAGAATTGGAGGGCAAAGTGGGGCTTGGG  700

seq1  GGTCTCCAATTATCTCTCTCCCCCTGCCCCTCAGGGGCCTCACTTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAATTATCTCTCTCCCCCTGCCCCTCAGGGGCCTCACTTTCTTC  750

seq1  CCCTACAGCTCACCGGCAGTCAACAGCCTCTCAAACCTGTTGAAATCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAGCTCACCGGCAGTCAACAGCCTCTCAAACCTGTTGAAATCCAT  800

seq1  TACCGACCTTTGGTCTCAGCCACCACAAAGGAGCTTTGCACAGTGCGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACCGACCTTTGGTCTCAGCCACCACAAAGGAGCTTTGCACAGTGCGCA-  849

seq1  GCGGATTAAACAGAAATGAATTGGCCGAGGGAGGCTTTGCGACCCTCGGC  900
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  GCGGA-TAAACAGAAATGAATTGGCCGAGGGAGGCTTTGCGA-CCTCGGC  897

seq1  GTTCCCGCCTCCCTCCTCCCCCCTCTCTCCTTCTATCTCACTTTTATTAT  950
      ||||||||||||   || |||||||||| ||||||||||||||||| |||
seq2  GTTCCCGCCTCC--TCTTCCCCCTCTCTTCTTCTATCTCACTTTTA-TAT  944

seq1  GATTTTTTTTTCTGGGAAGCCAGCTGGGCAGAGCCAAGATAAGGCAGAAC  1000
      ||||||||||| ||||||| ||||||||||||| | |||||  | |||||
seq2  GATTTTTTTTT-TGGGAAG-CAGCTGGGCAGAG-CTAGATA--GGAGAAC  989

seq1  CGATCC  1006
      ||||||
seq2  CGATCC  995

seq1: chr4_125431059_125432022
seq2: B6Ng01-027B14.g_65_1021 (reverse)

seq1  GGATCCTGGGATCCTGGGATTCTGGAATCCTGGGATCCTAGGTGTGTTAG  50
      ||||||| ||||||| ||| ||| |||| |||||||||||||||||||||
seq2  GGATCCTTGGATCCT-GGAATCT-GAAT-CTGGGATCCTAGGTGTGTTAG  47

seq1  AGCGCCTGGGATTTGAGCCTCCTCTGGGTGCTGTTGGACTGGCTGTGGAG  100
      |||| |||||||||||||   |||||||||||||||||||||||||||||
seq2  AGCG-CTGGGATTTGAGC--TCTCTGGGTGCTGTTGGACTGGCTGTGGAG  94

seq1  TTCATGCCCAAGGAAACTGGTGCAGGCTGGAAGGAACCAGAGCCACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCCCAAGGAAACTGGTGCAGGCTGGAAGGAACCAGAGCCACTGTG  144

seq1  TCCTTGCGTCCTGCTGGTCCCAGTTACTCCCAGTGGTATTGGAACAGATG  200
      ||||||||| ||||||||||||||||||||||||||||| | ||||||||
seq2  TCCTTGCGT-CTGCTGGTCCCAGTTACTCCCAGTGGTATGGAAACAGATG  193

seq1  TTGTGTCCTACTCACCTGATCGATCGTACAATTCTGGGCATGCTAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCTACTCACCTGATCGATCGTACAATTCTGGGCATGCTAGAGTG  243

seq1  CCTGGGAGTGGAGCCTCCTCTGGGTGCTGTGGGATTGGCTGCAGAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTGGAGCCTCCTCTGGGTGCTGTGGGATTGGCTGCAGAGTTCT  293

seq1  GCGCCCATGAACTTGTCTCTTGGAGGCTAAGTGTCTCTATCTGTACAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCCATGAACTTGTCTCTTGGAGGCTAAGTGTCTCTATCTGTACAATG  343

seq1  ACAAGTGAGGCCTTTTAGTAAAAACAGTGAAGTTTTACTTTTTGCCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAGGCCTTTTAGTAAAAACAGTGAAGTTTTACTTTTTGCCTCAG  393

seq1  AGGATCCCCAAGGCAGAATATCCATACTACATCTCAAAACCCTGAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCCCAAGGCAGAATATCCATACTACATCTCAAAACCCTGAGCATT  443

seq1  TCTGGGGCTCTTTTGTTACAAAGAACAGAAACCCCTTAAAGTCATGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCTCTTTTGTTACAAAGAACAGAAACCCCTTAAAGTCATGGGCA  493

seq1  GCACATGGCTCAACTGATGGAAAAGCAAGATGCTAATGAGGCTTCAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGCTCAACTGATGGAAAAGCAAGATGCTAATGAGGCTTCAGGCA  543

seq1  TGGCTCCATCCAGGTCTCAAGGGGCATAGAGGGCCATGGAACATTTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCATCCAGGTCTCAAGGGGCATAGAGGGCCATGGAACATTTTCAT  593

seq1  CAGGGAGTGATCTGACTAGATTTGAGTCCCCCATAACCTATAGTACTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTGATCTGACTAGATTTGAGTCCCCCATAACCTATAGTACTTCT  643

seq1  TGCTGCCATTATCATGGACCCAGACTGAGTCTAACAGATGCTTGCCACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCATTATCATGGACCCAGACTGAGTCTAACAGATGCTTGCCACCT  693

seq1  GAACTGCAGCCCTCCCTGGTAGGTCTCTCCTCTAACCACTGCACAGACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAGCCCTCCCTGGTAGGTCTCTCCTCTAACCACTGCACAGACCC  743

seq1  CCAGATCTGTGCAGCCTCTGCCTGGCCCTCTGCTGAGTCAGGACAAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTGTGCAGCCTCTGCCTGGCCCTCTGCTGAGTCAGGACAAAGCC  793

seq1  ACGGGGCCCAGAGTCTGGATTGGAGAACAAGGGGGAAGAAGTGAGAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGCCCAGAGTCTGGATTGGAGAACAAGGGGGAAGAAGTGAGAGAAG  843

seq1  GCCGGTAGGATGCTGGGTTGAGGGAGCTGGACATCCTTTCCTACTGCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGTAGGATGCTGGGTTGAGGGAGCTGGACATCCTTTCCTACTGCCTG  893

seq1  TTCTTGAGGGTCTGAGGCTGTGCGACAGAGAAAACCCTTTGACTGGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGGGTCTGAGGCTGTGCGACAGAGAAAACCCTTTGACTGGTCTT  943

seq1  CTGAAGTGGAATTC  964
      ||||||||||||||
seq2  CTGAAGTGGAATTC  957