BAC Information

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BAC

Clone NameB6Ng01-027C12
Chromosome4 (Build37)
Map Location 92,527,279 - 92,528,243
singlet/doubletsinglet
Overlap genenone
Upstream gene4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027C12.bB6Ng01-027C12.g
ACCDH857981DH857982
length1,168963
definitionDH857981|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C12, 5' end.DH857982|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacttcatatggaaaaacaaacaaacaaacgaaacaggggta
ggcaaaagaaaaatcttaaaaaaaaaaaccaaaaaacagaatttctgaga
aaatcaccatccccaacttcaagctgtactacagggcaataatgataatg
aaaaccacatctttttaatacatagcaagacttaaccaaaggaatataat
aaaagtcccagaagtaagcccacacacatatagacaattgatcactgaca
aagaagccaaaactatgcagtggaaaaatgaaagcctcttcaataaatgg
tgctaaactaactagcagccagcataaagaagaatgcaaattggtctgta
tacattatctcacaaaaaggtcaagtctaggtggatcagggacctcaaca
taaagccaaacatactgaatataatagaagagaaagtgggcaatagcttt
gaatgcactagtacagggggaaatttcttgaacagaacatcaatggctca
ggctctaagatcaacaattgataaatggaagtttttgacactcaaagttt
tctataaggcaacaaacacggtcagtaagacaaaatggtagcctataggt
agtgaaaagatcttcactaaccttacatttgatctgggttaatatataca
gaattcaaaaagttatactctaacaaatctagtaactcaattaaaggggt
gcggaactaaatagagacttctcaaaagagatttctcaaattgctgagaa
gtacttaaagaaatgttcatcatcgatagtcatcatggaaatgcaaatcc
aaatgactctgagatttcaccttataccaatcaaaattgctgagattaaa
actcaagtgccagcccatgatggcaaggatgtggagaaagaggaacaagc
tttcattgctggtaggtttgcaacctgtgcaaccactctggaatcaatca
gaagttcatcaaaaatggaaataattctacttgagccccgtttacccctt
ctgggttaaacaacaaagcttcaatacacagaacaggggtccctagtgaa
gcagcctattctatagctgaaaaggaacatcattgtctcactaatatgaa
cgtggcggggtggcacactatcaccttggagggagcaggggatttataag
gcgccgtctgccagtgtc
gaattcaaaatgttagaaaagatgagaaaggggaatacatatttatcaaa
tttcttttcttctttgggtcattagaagtcatcctctaccattccgaaaa
attctgcctccacatttttttcttatgtttttaaaaacacaaatgatatt
gaatgcaaaaacaaggtagtatttataagagagcacacatgaagaacaaa
actgcaaaaggatagagtggtaagtaggatacgatgagtgtcaagcttca
ccaaacgtgaagaagaaatgtggaatggggatctgagagttggagatcat
atagaaagctcacagatggttctcaggttgttaagacttgttttaaaatc
catttcatgtttacttttaagaatcacattatcatacttctaaatataaa
gtctgtataattctcacctctagagggagattccctaagttaataacatt
ttctttcactggtaaattatgtacccttacatgaatgcttaactcttctt
ttgtcttttgataaatagagaggacttcccacaaaccagttaggtgaagg
gaaaggtcaaaaagaattttatgtcattttctgcttgttaaaatatctac
taaattactgacttttcttataagcataaaatctttaaatattaaattgc
ataaaaatttttctaattatgataaaaaaatatacagatatttattgatc
acttattatatcctaaaagtttcatattaatattattgtaaacttcattg
attgactgttacattgttttatttctagaacattgacttattaaattctt
tgctacatgttattttcattatgctaagggatacatatgataaaactctg
ttctttagttcttccatctgtattatgacttactatattttattgtcttt
tcctgtagtttttcaaagctccacatatcatttttctttgctgtaaacac
aaaatcaaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92527279_92528243
seq2: B6Ng01-027C12.g_67_1029 (reverse)

seq1  TGCTTTTGATTTTTGTTGTTTTACATGCAAAG-AAAATG-TATGTGGAGC  48
      ||||||||| ||||||   |||||| |||||| |||||| ||||||||||
seq2  TGCTTTTGA-TTTTGT--GTTTACA-GCAAAGAAAAATGATATGTGGAGC  46

seq1  TTTGAAAAACTACAGGAAAAGACAATAAAATATAGTAAGTCATAATTACA  98
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTGAAAAACTACAGGAAAAGACAATAAAATATAGTAAGTCATAA-TACA  95

seq1  GATGGAAGAACTAAAGAACAGAGTTTTATCATATGTATCCCTTAGCATAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGAACTAAAGAACAGAGTTTTATCATATGTATCCCTTAGCATAA  145

seq1  TGAAAATAACATGTAGCAAAGAATTTAATAAGTCAATGTTCTAGAAATAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAACATGTAGCAAAGAATTTAATAAGTCAATGTTCTAGAAATAA  195

seq1  AACAATGTAACAGTCAATCAATGAAGTTTACAATAATATTAATATGAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAACAGTCAATCAATGAAGTTTACAATAATATTAATATGAAAC  245

seq1  TTTTAGGATATAATAAGTGATCAATAAATATCTGTATA-TTTTTTATCAT  297
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTAGGATATAATAAGTGATCAATAAATATCTGTATATTTTTTTATCAT  295

seq1  AATTAGAAAAATTTTTATGCAATTTAATATTTAAAGATTTTATGCTTATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAAAATTTTTATGCAATTTAATATTTAAAGATTTTATGCTTATA  345

seq1  AGAAAAGTCAGTAATTTAGTAGATATTTTAACAAGCAGAAAATGACATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCAGTAATTTAGTAGATATTTTAACAAGCAGAAAATGACATAA  395

seq1  AATTCTTTTTGACCTTTCCCTTCACCTAACTGGTTTGTGGGAAGTCCTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTTGACCTTTCCCTTCACCTAACTGGTTTGTGGGAAGTCCTCT  445

seq1  CTATTTATCAAAAGACAAAAGAAGAGTTAAGCATTCATGTAAGGGTACAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATCAAAAGACAAAAGAAGAGTTAAGCATTCATGTAAGGGTACAT  495

seq1  AATTTACCAGTGAAAGAAAATGTTATTAACTTAGGGAATCTCCCTCTAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCAGTGAAAGAAAATGTTATTAACTTAGGGAATCTCCCTCTAGA  545

seq1  GGTGAGAATTATACAGACTTTATATTTAGAAGTATGATAATGTGATTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAATTATACAGACTTTATATTTAGAAGTATGATAATGTGATTCTT  595

seq1  AAAAGTAAACATGAAATGGATTTTAAAACAAGTCTTAACAACCTGAGAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAACATGAAATGGATTTTAAAACAAGTCTTAACAACCTGAGAAC  645

seq1  CATCTGTGAGCTTTCTATATGATCTCCAACTCTCAGATCCCCATTCCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGAGCTTTCTATATGATCTCCAACTCTCAGATCCCCATTCCACA  695

seq1  TTTCTTCTTCACGTTTGGTGAAGCTTGACACTCATCGTATCCTACTTACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTCACGTTTGGTGAAGCTTGACACTCATCGTATCCTACTTACC  745

seq1  ACTCTATCCTTTTGCAGTTTTGTTCTTCATGTGTGCTCTCTTATAAATAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATCCTTTTGCAGTTTTGTTCTTCATGTGTGCTCTCTTATAAATAC  795

seq1  TACCTTGTTTTTGCATTCAATATCATTTGTGTTTTTAAAAACATAAGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGTTTTTGCATTCAATATCATTTGTGTTTTTAAAAACATAAGAAA  845

seq1  AAAATGTGGAGGCAGAATTTTTCGGAATGGTAGAGGATGACTTCTAATGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGGAGGCAGAATTTTTCGGAATGGTAGAGGATGACTTCTAATGA  895

seq1  CCCAAAGAAGAAAAGAAATTTGATAAATATGTATTCCCCTTTCTCATCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGAAGAAAAGAAATTTGATAAATATGTATTCCCCTTTCTCATCTT  945

seq1  TTCTAACATTTTGAATTC  965
      ||||||||||||||||||
seq2  TTCTAACATTTTGAATTC  963