BAC Information

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BAC

Clone NameB6Ng01-027P13
Chromosome4 (Build37)2 (Build37)
Map Location 60,051,700 - 60,052,21482,075,784 - 82,076,842
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807
Downstream geneLOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027P13.bB6Ng01-027P13.g
ACCDH858574DH858575
length9571,060
definitionDH858574|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P13, 5' end.DH858575|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,051,700 - 60,052,214)(82,075,784 - 82,076,842)
sequence
gaattctctgccctgccttaaccacttgttgacatgtgaaaaggaacaaa
aaggcttctaaaactggagaaagttcaaggccagacatacctcgtaaagc
tgtaatgtgtcccgcagttctggttccgcctcgcgaacgagggatctccc
ttgcgccagtgtgatggtagttccagggtttctcgatgccacttatcctg
agcttttgtccatgccggcaagaacacactcaggacaacaggaatcttct
gcggcaaaaggctttattgcttacttcttcaggaggaagagagcaaatgg
cgaaaccccgtcccttttatggagaattgtcctccaccttggacgtattg
attggctgcagcccattggccgagttgtcatcatggggaaggcaaaacac
atggagtggaaaactaccccggcacatgtgcagattatttgtttactact
tagaacacaggatgtcagcaccatcttgtaatggtgaatgtgagggcggc
tcctcacagactataactgagggttctttaagctggggatacggagccta
aagtggccacattctctagagataggcaggactaccagtggaaggataag
gacaccaacctacccacaaaaccttccaccaaaacaatgttttacctaca
agaagtacagggggaaagatagggcagagactgagggaatggtcaaccga
tgtctagcccaacttcagacctatcctattgtcaaacaccaatccctgcc
actattaatgatagttatgcttgcagacaggaggctagcatacttttaat
ctgagagcctccacccagcagcagaggcccacagtcaaacattagatgaa
gttcaggggccttgtggaagagttggaagaggaattgagggacttgaaga
ggacaaggactatgcaatagacaacagagttcactagcctcggctttgag
ggctctc
gaattctttgctttttttgactcatgttttcaaacttgttttgctgattt
ttttatttgtcttttgttctttttctagttctaattgttatattaaagtt
gacaacagttgggtcaaagtaaactcaagggagtgctcattgtatgtttc
ccttgaaattttatgtttcaggactatgctgaaaaggagaacactattgc
caaagctctggaggatctgaaggcaaatttttactgtgagctttgtgaca
agcagtattataagcatcaggaatttgacaatcacattaactcatatgac
cacgcccacaaacaggtaagaaaaatatatcaaaagtaaacattttaaat
aattttcatggactgaattgttaagaccacattaaaagttttattttgtt
ctcatcaaatttataatcataaagttgtaattctgtgatgatgaatcaag
tttaaaggtcaaaagtcaatgttagaaagaaatgtctaatgaaaatcaag
tcacaaataaaagtcttatatttttcacatttgttttaaaagcaaaaatc
tgaagaaaatgatcttctaaatgacctcaaatatataacatttaaaaagt
tgttcaaaactagagtcattcaacataagtaagattttacatataaggtc
ttacatttcttaacaataagttacatatattggaaaatgaatccttatac
agctggcaaaaattctagaggtgctgattgtgttctttcgtgaaagtggt
atagacttaaactgtcctgaaaaatcatgggaaaaatgccttagggtttc
ttgattaaatatgttcatgattcgtctatgtctgtctatttgtattttat
actaatatcaattaaaaaatccactattgattgtttgctaagttctgtaa
aaacaaatttaaattagtaactaagaattggagttaattttgatttaatt
ttctaaagtgcctgatattaacaatgacaacattatttgttgtttctcta
ataatcgaatgtcagacttagcaacagtttatacatatttatttgtcaaa
tcctcccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_60051700_60052214
seq2: B6Ng01-027P13.b_43_544

seq1  GAATTCTCTGCCCTGCCTTAACCACTTGTTGACATGTGAAAAGGAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCCTGCCTTAACCACTTGTTGACATGTGAAAAGGAACAAA  50

seq1  AGGGCTTCTAACACTAGAGAAAGTTCAAGGCCATACATACCTCGTAAAGC  100
      | ||||||||| ||| ||||||||||||||||| ||||||||||||||||
seq2  AAGGCTTCTAAAACTGGAGAAAGTTCAAGGCCAGACATACCTCGTAAAGC  100

seq1  TGTAATGTGTCCCGCAGTTCTGGTTCCGCCTTGCGAACGAGGGATCTCCC  150
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTAATGTGTCCCGCAGTTCTGGTTCCGCCTCGCGAACGAGGGATCTCCC  150

seq1  TTGCGCCGGTGTGATGGTAGTTCCCGGATT--TCGGCACCACTTATCCTG  198
      ||||||| |||||||||||||||| || ||  |||   ||||||||||||
seq2  TTGCGCCAGTGTGATGGTAGTTCCAGGGTTTCTCGATGCCACTTATCCTG  200

seq1  AGCTTTTGTCCCCACCAGCAAGAACATGCTCAGGACAACCAGAATCTCCT  248
      |||||||||||   || |||||||||  |||||||||||  |||||| ||
seq2  AGCTTTTGTCCATGCCGGCAAGAACACACTCAGGACAACAGGAATCTTCT  250

seq1  GCGGCAAAA-GCTTTATTGCTTACTTCTTCAGGAGCAAGAGGAGAAGAGG  297
      ||||||||| ||||||||||||||||||||||||| ||||         |
seq2  GCGGCAAAAGGCTTTATTGCTTACTTCTTCAGGAGGAAGA---------G  291

seq1  GGCGAATGGCAAAACCCCGTCCCTTTTATGGAGGATTGTCCTTCGCCTCG  347
       || |||||| |||||||||||||||||||||| |||||||| | ||| |
seq2  AGCAAATGGCGAAACCCCGTCCCTTTTATGGAGAATTGTCCTCCACCTTG  341

seq1  GACGTGTCGCTCCCTGATTGGCTGCAGCCCATCGACCGAGTTGTCGTCAC  397
      ||||| |       |||||||||||||||||| | |||||||||| ||| 
seq2  GACGTAT-------TGATTGGCTGCAGCCCATTGGCCGAGTTGTCATCAT  384

seq1  GGGGAAGGCAGAGCACATGGAGTGGAAATCTACCCCAGCACATGCGCAGT  447
      |||||||||| | ||||||||||||||| ||||||| ||||||| |||| 
seq2  GGGGAAGGCAAAACACATGGAGTGGAAAACTACCCCGGCACATGTGCAGA  434

seq1  ATATTTGTTTACTACTTAGAACACAGGATGTCGGCGCCATCTTGTAATGG  497
       ||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  TTATTTGTTTACTACTTAGAACACAGGATGTCAGCACCATCTTGTAATGG  484

seq1  CAAATGTGAGGGTGGCTC  515
        |||||||||| |||||
seq2  TGAATGTGAGGGCGGCTC  502

seq1: chr2_82075784_82076842
seq2: B6Ng01-027P13.g_70_1129

seq1  GAATTCTTTGCTTTTTTTGACTCATGTTTTCAAACTTGTTTTGCTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTTTTTTGACTCATGTTTTCAAACTTGTTTTGCTGATTT  50

seq1  TTTTATTTGTCTTTTGTTCTTTTTCTAGTTCTAATTGTTATATTAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTCTTTTGTTCTTTTTCTAGTTCTAATTGTTATATTAAAGTT  100

seq1  GACAACAGTTGGGTCAAAGTAAACTCAAGGGAGTGCTCATTGTATGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGTTGGGTCAAAGTAAACTCAAGGGAGTGCTCATTGTATGTTTC  150

seq1  CCTTGAAATTTTATGTTTCAGGACTATGCTGAAAAGGAGAACACTATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATTTTATGTTTCAGGACTATGCTGAAAAGGAGAACACTATTGC  200

seq1  CAAAGCTCTGGAGGATCTGAAGGCAAATTTTTACTGTGAGCTTTGTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTCTGGAGGATCTGAAGGCAAATTTTTACTGTGAGCTTTGTGACA  250

seq1  AGCAGTATTATAAGCATCAGGAATTTGACAATCACATTAACTCATATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTATTATAAGCATCAGGAATTTGACAATCACATTAACTCATATGAC  300

seq1  CACGCCCACAAACAGGTAAGAAAAATATATCAAAAGTAAACATTTTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCCACAAACAGGTAAGAAAAATATATCAAAAGTAAACATTTTAAAT  350

seq1  AATTTTCATGGACTGAATTGTTAAGACCACATTAAAAGTTTTATTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATGGACTGAATTGTTAAGACCACATTAAAAGTTTTATTTTGTT  400

seq1  CTCATCAAATTTATAATCATAAAGTTGTAATTCTGTGATGATGAATCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAAATTTATAATCATAAAGTTGTAATTCTGTGATGATGAATCAAG  450

seq1  TTTAAAGGTCAAAAGTCAATGTTAGAAAGAAATGTCTAATGAAAATCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGTCAAAAGTCAATGTTAGAAAGAAATGTCTAATGAAAATCAAG  500

seq1  TCACAAATAAAAGTCTTATATTTTTCACATTTGTTTTAAAAGCAAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATAAAAGTCTTATATTTTTCACATTTGTTTTAAAAGCAAAAATC  550

seq1  TGAAGAAAATGATCTTCTAAATGACCTCAAATATATAACATTTAAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAATGATCTTCTAAATGACCTCAAATATATAACATTTAAAAAGT  600

seq1  TGTTCAAAACTAGAGTCATTCAACATAAGTAAGATTTTACATATAAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAAACTAGAGTCATTCAACATAAGTAAGATTTTACATATAAGGTC  650

seq1  TTACATTTCTTAACAATAAGTTACATATATTGGAAAATGAATCCTTATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCTTAACAATAAGTTACATATATTGGAAAATGAATCCTTATAC  700

seq1  AGCTGGCAAAAATTCTAGAGGTGCTGATTGTGTTC-TTCGTGAAAGTGGT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCTGGCAAAAATTCTAGAGGTGCTGATTGTGTTCTTTCGTGAAAGTGGT  750

seq1  ATAGACTTAAACTGTCCTGAAAAATCATGGGAAAAATGCCTTAGGG-TTC  798
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAGACTTAAACTGTCCTGAAAAATCATGGGAAAAATGCCTTAGGGTTTC  800

seq1  TTGATTAAATATGTTCATGATTCGTCTATGTCTGTCTATTTGTATTTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAAATATGTTCATGATTCGTCTATGTCTGTCTATTTGTATTTTAT  850

seq1  ACTAATATCAATT-ATAAATCCACTATTGATTGTTTGCTAAGTTCTGTAA  897
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  ACTAATATCAATTAAAAAATCCACTATTGATTGTTTGCTAAGTTCTGTAA  900

seq1  AAACAAATTTAAATTAGTAACTAAGAAGTGAAGTTAATTTTGATTTTATT  947
      ||||||||||||||||||||||||||| || ||||||||||||||| |||
seq2  AAACAAATTTAAATTAGTAACTAAGAATTGGAGTTAATTTTGATTTAATT  950

seq1  TTCTAAAGTGCCTGATATTTACCATGACAACATTATTTGTTGTTTCTCTA  997
      ||||||||||||||||||| || |||||||||||||||||||||||||||
seq2  TTCTAAAGTGCCTGATATTAACAATGACAACATTATTTGTTGTTTCTCTA  1000

seq1  ATAATCGAATGTCAGACTTAGCATCAGTTTATACATATTTTATTTGTCAA  1047
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  ATAATCGAATGTCAGACTTAGCAACAGTTTATACATA-TTTATTTGTCAA  1049

seq1  ATCTCACCCACA  1059
      ||| | ||||||
seq2  ATC-CTCCCACA  1060